RNA–Protein interactions for RNA: ENST00000302536.2

VAT1L-201, Transcript of vesicle amine transport 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAT1L, Length 3,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1L-201ENST00000302536 TIMP2P16035 220 aa12.31□□□□□ -0.44
VAT1L-201ENST00000302536 MYL9P24844 172 aa12.31□□□□□ -0.44
VAT1L-201ENST00000302536 SOX3P41225 446 aa12.31□□□□□ -0.44
VAT1L-201ENST00000302536 TMEM31Q5JXX7 168 aa12.31□□□□□ -0.44
VAT1L-201ENST00000302536 PARS2Q7L3T8 475 aaKnown RBP12.31□□□□□ -0.44
VAT1L-201ENST00000302536 SPATA19Q7Z5L4 167 aa12.31□□□□□ -0.44
VAT1L-201ENST00000302536 GALNT7Q86SF2 657 aa12.31□□□□□ -0.44
VAT1L-201ENST00000302536 RGL4Q8IZJ4 473 aa12.31□□□□□ -0.44
VAT1L-201ENST00000302536 MINDY1Q8N5J2 469 aa12.31□□□□□ -0.44
VAT1L-201ENST00000302536 TOR1AIP2Q8NFQ8 470 aa12.31□□□□□ -0.44
VAT1L-201ENST00000302536 SUSD6Q92537 303 aa12.31□□□□□ -0.44
VAT1L-201ENST00000302536 ASPNQ9BXN1 380 aa12.31□□□□□ -0.44
VAT1L-201ENST00000302536 NECTIN3Q9NQS3 549 aa12.31□□□□□ -0.44
VAT1L-201ENST00000302536 C1orf109Q9NX04 203 aa12.31□□□□□ -0.44
VAT1L-201ENST00000302536 SSR3Q9UNL2 185 aa12.31□□□□□ -0.44
VAT1L-201ENST00000302536 TRBV23OR9-2A0A075B6M9 112 aa12.3□□□□□ -0.44
VAT1L-201ENST00000302536 VPS4BO75351 444 aa12.3□□□□□ -0.44
VAT1L-201ENST00000302536 CDC42P60953 191 aa12.3□□□□□ -0.44
VAT1L-201ENST00000302536 RASSF6Q6ZTQ3 369 aa12.3□□□□□ -0.44
VAT1L-201ENST00000302536 CPXM2Q8N436 756 aa12.3□□□□□ -0.44
VAT1L-201ENST00000302536 DYNC2LI1Q8TCX1 351 aa12.3□□□□□ -0.44
VAT1L-201ENST00000302536 C11orf24Q96F05 449 aaPredicted RBP12.3□□□□□ -0.44
VAT1L-201ENST00000302536 OTUB1Q96FW1 271 aaPredicted RBP12.3□□□□□ -0.44
VAT1L-201ENST00000302536 ASB2Q96Q27 587 aa12.3□□□□□ -0.44
VAT1L-201ENST00000302536 TBX5Q99593 518 aa12.3□□□□□ -0.44
VAT1L-201ENST00000302536 CCM2Q9BSQ5 444 aa12.3□□□□□ -0.44
VAT1L-201ENST00000302536 HTATIP2Q9BUP3 242 aa12.3□□□□□ -0.44
VAT1L-201ENST00000302536 SLC6A17Q9H1V8 727 aa12.3□□□□□ -0.44
VAT1L-201ENST00000302536 KCNN3Q9UGI6 736 aa12.3□□□□□ -0.44
VAT1L-201ENST00000302536 SNX7Q9UNH6 387 aa12.3□□□□□ -0.44
VAT1L-201ENST00000302536 GABARAPO95166 117 aa12.3□□□□□ -0.44
VAT1L-201ENST00000302536 SSTR2P30874 369 aa12.3□□□□□ -0.44
VAT1L-201ENST00000302536 HTR3AP46098 478 aa12.3□□□□□ -0.44
VAT1L-201ENST00000302536 SUOXP51687 545 aa12.3□□□□□ -0.44
VAT1L-201ENST00000302536 CHRNEQ04844 493 aa12.3□□□□□ -0.44
VAT1L-201ENST00000302536 FGFBP1Q14512 234 aa12.3□□□□□ -0.44
VAT1L-201ENST00000302536 SHHQ15465 462 aa12.3□□□□□ -0.44
VAT1L-201ENST00000302536 PSRC1Q6PGN9 363 aaPredicted RBP12.3□□□□□ -0.44
VAT1L-201ENST00000302536 USP30Q70CQ3 517 aa12.3□□□□□ -0.44
VAT1L-201ENST00000302536 LRRC17Q8N6Y2 441 aa12.3□□□□□ -0.44
VAT1L-201ENST00000302536 ANKK1Q8NFD2 765 aa12.3□□□□□ -0.44
VAT1L-201ENST00000302536 BPIFB1Q8TDL5 484 aa12.3□□□□□ -0.44
VAT1L-201ENST00000302536 PPP3R2Q96LZ3 170 aa12.3□□□□□ -0.44
VAT1L-201ENST00000302536 DHRS9Q9BPW9 319 aa12.3□□□□□ -0.44
VAT1L-201ENST00000302536 PPIL3Q9H2H8 161 aaKnown RBP12.3□□□□□ -0.44
VAT1L-201ENST00000302536 ZNF385DQ9H6B1 395 aa12.3□□□□□ -0.44
VAT1L-201ENST00000302536 CCNB1IP1Q9NPC3 277 aa12.3□□□□□ -0.44
VAT1L-201ENST00000302536 MS4A12Q9NXJ0 267 aa12.3□□□□□ -0.44
VAT1L-201ENST00000302536 TVP23BQ9NYZ1 205 aa12.3□□□□□ -0.44
VAT1L-201ENST00000302536 HS3ST2Q9Y278 367 aa12.3□□□□□ -0.44
VAT1L-201ENST00000302536 H3BSH0 61 aa12.3□□□□□ -0.44
VAT1L-201ENST00000302536 PLD2O14939 933 aa12.3□□□□□ -0.44
VAT1L-201ENST00000302536 IL6P05231 212 aa12.3□□□□□ -0.44
VAT1L-201ENST00000302536 KIR3DL1P43629 444 aa12.3□□□□□ -0.44
VAT1L-201ENST00000302536 TIMM50Q3ZCQ8 353 aa12.3□□□□□ -0.44
VAT1L-201ENST00000302536 IER5LQ5T953 404 aa12.3□□□□□ -0.44
VAT1L-201ENST00000302536 ZNF613Q6PF04 617 aa12.3□□□□□ -0.44
VAT1L-201ENST00000302536 KRT73Q86Y46 540 aa12.3□□□□□ -0.44
VAT1L-201ENST00000302536 VMP1Q96GC9 406 aa12.3□□□□□ -0.44
VAT1L-201ENST00000302536 MMP27Q9H306 513 aa12.3□□□□□ -0.44
VAT1L-201ENST00000302536 SERHL2Q9H4I8 314 aa12.3□□□□□ -0.44
VAT1L-201ENST00000302536 SERHLQ9NQF3 203 aa12.3□□□□□ -0.44
VAT1L-201ENST00000302536 EIF3KQ9UBQ5 218 aaKnown RBP12.3□□□□□ -0.44
VAT1L-201ENST00000302536 STOML2Q9UJZ1 356 aa12.3□□□□□ -0.44
VAT1L-201ENST00000302536 TMPRSS11EQ9UL52 423 aa12.3□□□□□ -0.44
VAT1L-201ENST00000302536 TNPO3Q9Y5L0 923 aaKnown RBP12.3□□□□□ -0.44
VAT1L-201ENST00000302536 SPIN1Q9Y657 262 aaPredicted RBP12.3□□□□□ -0.44
VAT1L-201ENST00000302536 CYP2A6P11509 494 aaPredicted RBP12.29□□□□□ -0.44
VAT1L-201ENST00000302536 JUNBP17275 347 aaPredicted RBP12.29□□□□□ -0.44
VAT1L-201ENST00000302536 TIE1P35590 1138 aa12.29□□□□□ -0.44
VAT1L-201ENST00000302536 DBPQ10586 325 aaPredicted RBP12.29□□□□□ -0.44
VAT1L-201ENST00000302536 HNRNPA0Q13151 305 aaKnown RBP12.29□□□□□ -0.44
VAT1L-201ENST00000302536 FLYWCH1Q4VC44 716 aa12.29□□□□□ -0.44
VAT1L-201ENST00000302536 TANGO2Q6ICL3 276 aa12.29□□□□□ -0.44
VAT1L-201ENST00000302536 SHFQ7M4L6 423 aa12.29□□□□□ -0.44
VAT1L-201ENST00000302536 TMPRSS11BQ86T26 416 aa12.29□□□□□ -0.44
VAT1L-201ENST00000302536 LSMEM1Q8N8F7 131 aa12.29□□□□□ -0.44
VAT1L-201ENST00000302536 RIT1Q92963 219 aa12.29□□□□□ -0.44
VAT1L-201ENST00000302536 SH3KBP1Q96B97 665 aa12.29□□□□□ -0.44
VAT1L-201ENST00000302536 RHBDF1Q96CC6 855 aa12.29□□□□□ -0.44
VAT1L-201ENST00000302536 CHFRQ96EP1 664 aa12.29□□□□□ -0.44
VAT1L-201ENST00000302536 HSH2DQ96JZ2 352 aa12.29□□□□□ -0.44
VAT1L-201ENST00000302536 SNX18Q96RF0 628 aa12.29□□□□□ -0.44
VAT1L-201ENST00000302536 INPP5KQ9BT40 448 aa12.29□□□□□ -0.44
VAT1L-201ENST00000302536 PBX4Q9BYU1 374 aa12.29□□□□□ -0.44
VAT1L-201ENST00000302536 TTTY10Q9BZA0 68 aa12.29□□□□□ -0.44
VAT1L-201ENST00000302536 CD244Q9BZW8 370 aa12.29□□□□□ -0.44
VAT1L-201ENST00000302536 CDCP1Q9H5V8 836 aa12.29□□□□□ -0.44
VAT1L-201ENST00000302536 CACYBPQ9HB71 228 aaKnown RBP12.29□□□□□ -0.44
VAT1L-201ENST00000302536 CLN6Q9NWW5 311 aa12.29□□□□□ -0.44
VAT1L-201ENST00000302536 ISM1B1AKI9 464 aa12.29□□□□□ -0.44
VAT1L-201ENST00000302536 LINC01565O15544 149 aa12.29□□□□□ -0.44
VAT1L-201ENST00000302536 WISP3O95389 354 aaPredicted RBP12.29□□□□□ -0.44
VAT1L-201ENST00000302536 CH25HO95992 272 aa12.29□□□□□ -0.44
VAT1L-201ENST00000302536 HSD17B1P14061 328 aa12.29□□□□□ -0.44
VAT1L-201ENST00000302536 MYL12AP19105 171 aa12.29□□□□□ -0.44
VAT1L-201ENST00000302536 LIPAP38571 399 aa12.29□□□□□ -0.44
VAT1L-201ENST00000302536 SUZ12Q15022 739 aaKnown RBP12.29□□□□□ -0.44
VAT1L-201ENST00000302536 POU4F3Q15319 338 aa12.29□□□□□ -0.44
VAT1L-201ENST00000302536 CDONQ4KMG0 1287 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms