RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 ZNF283Q8N7M2 679 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 ZFP41Q8N8Y5 198 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 OR2T35Q8NGX2 323 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 OR6N2Q8NGY6 317 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 SECISBP2Q96T21 854 aaKnown RBP14.32□□□□□ -0.12
SCN3B-201ENST00000299333 GPR22Q99680 433 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 ORAI3Q9BRQ5 295 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 SLC29A3Q9BZD2 475 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 FZD3Q9NPG1 666 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 FAM118AQ9NWS6 357 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 KIDINS220Q9ULH0 1771 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 ARHGAP23Q9P227 1491 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 ATRNO75882 1429 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 A0A0G2JMP0 313 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 ARPC5O15511 151 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 OR8U9P0C7N5 309 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 C8orf89P0DMQ9 161 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 LRRC32Q14392 662 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 GK2Q14410 553 aaPredicted RBP14.32□□□□□ -0.12
SCN3B-201ENST00000299333 C10orf62Q5T681 223 aaPredicted RBP14.32□□□□□ -0.12
SCN3B-201ENST00000299333 TMPRSS12Q86WS5 348 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 NATD1Q8N6N6 113 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 OR4M2Q8NGB6 313 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 BORCS8Q96FH0 119 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 CDKN2AIPNLQ96HQ2 116 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 CD300AQ9UGN4 299 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 TMEM59LQ9UK28 342 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 MAGED1Q9Y5V3 778 aaPredicted RBP14.32□□□□□ -0.12
SCN3B-201ENST00000299333 WTIPA6NIX2 430 aaPredicted RBP14.32□□□□□ -0.12
SCN3B-201ENST00000299333 NDUFS4O43181 175 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 MTX2O75431 263 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 FGF3P11487 239 aaPredicted RBP14.32□□□□□ -0.12
SCN3B-201ENST00000299333 ACVR1BP36896 505 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 RHBDL3P58872 404 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 NDUFAF5Q5TEU4 345 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 NOXA1Q86UR1 476 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 OR13J1Q8NGT2 312 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 PTERQ96BW5 349 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 EPYCQ99645 322 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.32□□□□□ -0.12
SCN3B-201ENST00000299333 REEP4Q9H6H4 257 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 GRXCR1A8MXD5 290 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 DIO3P55073 304 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 GAS6Q14393 721 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 SPHARQ15513 63 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 PRAMEF14Q5SWL7 426 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 PRAMEF13Q5VWM6 474 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 DESI1Q6ICB0 168 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 THOC6Q86W42 341 aaKnown RBP14.32□□□□□ -0.12
SCN3B-201ENST00000299333 VGLL2Q8N8G2 317 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 NR4A3Q92570 626 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 SLC45A3Q96JT2 553 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 P2RY13Q9BPV8 354 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 LHPPQ9H008 270 aa14.32□□□□□ -0.12
SCN3B-201ENST00000299333 ALPIP09923 528 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 GNB3P16520 340 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 OPRL1P41146 370 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 NRIP1P48552 1158 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 ETV1P50549 477 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 HK3P52790 923 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 FKBP1AP62942 108 aaKnown RBP14.31□□□□□ -0.12
SCN3B-201ENST00000299333 RNF4P78317 190 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 SNTA1Q13424 505 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 ZSWIM9Q86XI8 627 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 GID4Q8IVV7 300 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 ABHD11Q8NFV4 315 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 ELMOD3Q96FG2 381 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 SERINC1Q9NRX5 453 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 SPATA31A6Q5VVP1 1343 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 GPR25O00155 361 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 GRID2O43424 1007 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 CD34P28906 385 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 AQP2P41181 271 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 ASPAP45381 313 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 ZNF792Q3KQV3 632 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 DACT2Q5SW24 774 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 GSG1LQ6UXU4 331 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 BAIAP2L2Q6UXY1 529 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 TTLQ8NG68 377 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 RAB8BQ92930 207 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 CMTM7Q96FZ5 175 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 SULT4A1Q9BR01 284 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 HDHD5Q9BXW7 423 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 CXCL14O95715 111 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 SCGB1D1O95968 90 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 ABRAXAS2Q15018 415 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 CARD16Q5EG05 197 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 ATG9BQ674R7 924 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 KLBQ86Z14 1044 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 LAS2Q8IYD9 372 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 FIBCD1Q8N539 461 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 OR7G1Q8NGA0 311 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 TMIGD2Q96BF3 282 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 MCCC2Q9HCC0 563 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 LRFN1Q9P244 771 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 PRSS51A0A1B0GVH4 220 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 SLC1A7O00341 560 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 PPP1R11O60927 126 aaPredicted RBP14.31□□□□□ -0.12
SCN3B-201ENST00000299333 BDKRB1P46663 353 aa14.31□□□□□ -0.12
SCN3B-201ENST00000299333 ATP4BP51164 291 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms