RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 GGT1P19440 569 aa10.42□□□□□ -0.74
GGPS1-201ENST00000282841 TNFRSF1BP20333 461 aa10.42□□□□□ -0.74
GGPS1-201ENST00000282841 PSMA4P25789 261 aaKnown RBP10.42□□□□□ -0.74
GGPS1-201ENST00000282841 HTR1EP28566 365 aa10.42□□□□□ -0.74
GGPS1-201ENST00000282841 SLC7A1P30825 629 aa10.42□□□□□ -0.74
GGPS1-201ENST00000282841 CDK9P50750 372 aaKnown RBP10.42□□□□□ -0.74
GGPS1-201ENST00000282841 GZMMP51124 257 aa10.42□□□□□ -0.74
GGPS1-201ENST00000282841 BLKP51451 505 aa10.42□□□□□ -0.74
GGPS1-201ENST00000282841 MANFP55145 182 aaKnown RBP10.42□□□□□ -0.74
GGPS1-201ENST00000282841 ZNF33BQ06732 778 aa10.42□□□□□ -0.74
GGPS1-201ENST00000282841 LAPTM4AQ15012 233 aa10.42□□□□□ -0.74
GGPS1-201ENST00000282841 ADRM1Q16186 407 aa10.42□□□□□ -0.74
GGPS1-201ENST00000282841 ANKRD34AQ69YU3 496 aa10.42□□□□□ -0.74
GGPS1-201ENST00000282841 TNFAIP8L2Q6P589 184 aaPredicted RBP10.42□□□□□ -0.74
GGPS1-201ENST00000282841 VTCN1Q7Z7D3 282 aa10.42□□□□□ -0.74
GGPS1-201ENST00000282841 NAF1Q96HR8 494 aaKnown RBP10.42□□□□□ -0.74
GGPS1-201ENST00000282841 OR2A5Q96R48 311 aa10.42□□□□□ -0.74
GGPS1-201ENST00000282841 ZNF184Q99676 751 aaPredicted RBP10.42□□□□□ -0.74
GGPS1-201ENST00000282841 MAP3K3Q99759 626 aa10.42□□□□□ -0.74
GGPS1-201ENST00000282841 KLHL4Q9C0H6 718 aa10.42□□□□□ -0.74
GGPS1-201ENST00000282841 FAM120CQ9NX05 1096 aaKnown RBP10.42□□□□□ -0.74
GGPS1-201ENST00000282841 AP1M2Q9Y6Q5 423 aa10.42□□□□□ -0.74
GGPS1-201ENST00000282841 C15orf38-AP3S2A0A0A6YYH1 394 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 EVPLLA8MZ36 301 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 H0YGG7 62 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 CLEC3AO75596 197 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 NPPAP01160 153 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 NELFEP18615 380 aaKnown RBP10.41□□□□□ -0.74
GGPS1-201ENST00000282841 HIST1H1TP22492 207 aaPredicted RBP10.41□□□□□ -0.74
GGPS1-201ENST00000282841 ATP5A1P25705 553 aaKnown RBP10.41□□□□□ -0.74
GGPS1-201ENST00000282841 CHI3L1P36222 383 aaPredicted RBP10.41□□□□□ -0.74
GGPS1-201ENST00000282841 C21orf59P57076 290 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 ARF3P61204 181 aaPredicted RBP10.41□□□□□ -0.74
GGPS1-201ENST00000282841 CSTF1Q05048 431 aaKnown RBP10.41□□□□□ -0.74
GGPS1-201ENST00000282841 KLC1Q07866 573 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 KCNAB1Q14722 419 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 ARPINQ7Z6K5 226 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 PTRH1Q86Y79 214 aaKnown RBP10.41□□□□□ -0.74
GGPS1-201ENST00000282841 UBALD2Q8IYN6 164 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 MICU2Q8IYU8 434 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 CCDC116Q8IYX3 515 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 HS3ST5Q8IZT8 346 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 LSM14AQ8ND56 463 aaKnown RBP10.41□□□□□ -0.74
GGPS1-201ENST00000282841 SIMC1Q8NDZ2 872 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 VPS37AQ8NEZ2 397 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 NCSTNQ92542 709 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 RAB8BQ92930 207 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 COL26A1Q96A83 441 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 TGM7Q96PF1 710 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 CHID1Q9BWS9 393 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 POT1Q9NUX5 634 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 DLGAP2Q9P1A6 1054 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 BCAP29Q9UHQ4 241 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 DTNAQ9Y4J8 743 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 U3KQV3 271 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 EP300Q09472 2414 aaPredicted RBP10.41□□□□□ -0.74
GGPS1-201ENST00000282841 C1orf226A1L170 272 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 A8MU76 341 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 PATE3B3GLJ2 98 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 FAM227AF5H4B4 570 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 B4GALT2O60909 372 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 CREG1O75629 220 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 ANXA6P08133 673 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 DDCP20711 480 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 ENDOUP21128 410 aaKnown RBP10.41□□□□□ -0.74
GGPS1-201ENST00000282841 CDH3P22223 829 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 NXPH1P58417 271 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 ABATP80404 500 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 KIR2DS3Q14952 304 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 ELOCQ15369 112 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 C6orf52Q5T4I8 152 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 PTOV1Q86YD1 416 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 ANKRD13BQ86YJ7 626 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.41□□□□□ -0.74
GGPS1-201ENST00000282841 FAM9CQ8IZT9 166 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 SLC25A45Q8N413 288 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 CAMKK1Q8N5S9 505 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 MFSD9Q8NBP5 474 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 CADM4Q8NFZ8 388 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 VPS50Q96JG6 964 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 CCDC115Q96NT0 180 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 CSF3RQ99062 836 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 SLC38A3Q99624 504 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 SMOC1Q9H4F8 434 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 CCM2LQ9NUG4 571 aaPredicted RBP10.41□□□□□ -0.74
GGPS1-201ENST00000282841 ATP6V1HQ9UI12 483 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 LRRC42Q9Y546 428 aa10.41□□□□□ -0.74
GGPS1-201ENST00000282841 ASCC3Q8N3C0 2202 aaKnown RBP10.41□□□□□ -0.74
GGPS1-201ENST00000282841 A0A0A6YYD5 115 aa10.4□□□□□ -0.74
GGPS1-201ENST00000282841 KIR2DS5A0A0G2JLQ3 304 aa10.4□□□□□ -0.74
GGPS1-201ENST00000282841 A0A0G2JNG1 304 aa10.4□□□□□ -0.74
GGPS1-201ENST00000282841 OR2A25A4D2G3 310 aa10.4□□□□□ -0.74
GGPS1-201ENST00000282841 C2orf74A8MZ97 194 aa10.4□□□□□ -0.74
GGPS1-201ENST00000282841 KIR2DS3K7RE56 304 aa10.4□□□□□ -0.74
GGPS1-201ENST00000282841 SOCS2O14508 198 aa10.4□□□□□ -0.74
GGPS1-201ENST00000282841 NOBOXO60393 691 aa10.4□□□□□ -0.74
GGPS1-201ENST00000282841 UBXN7O94888 489 aa10.4□□□□□ -0.74
GGPS1-201ENST00000282841 AIFM1O95831 613 aa10.4□□□□□ -0.74
GGPS1-201ENST00000282841 UBTFL6P0CB48 400 aaPredicted RBP10.4□□□□□ -0.74
GGPS1-201ENST00000282841 SEPHS1P49903 392 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms