RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 SPRYD4Q8WW59 207 aaPredicted RBP8.43□□□□□ -1.06
NIPBL-201ENST00000282516 FRZBQ92765 325 aa8.43□□□□□ -1.06
NIPBL-201ENST00000282516 SPIN2AQ99865 258 aa8.43□□□□□ -1.06
NIPBL-201ENST00000282516 SPIN2BQ9BPZ2 258 aa8.43□□□□□ -1.06
NIPBL-201ENST00000282516 B3GNT2Q9NY97 397 aa8.43□□□□□ -1.06
NIPBL-201ENST00000282516 ZDHHC3Q9NYG2 299 aa8.43□□□□□ -1.06
NIPBL-201ENST00000282516 A8MV72 311 aaPredicted RBP8.42□□□□□ -1.06
NIPBL-201ENST00000282516 MAP2K3P46734 347 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 LEPRP48357 1165 aaKnown RBP8.42□□□□□ -1.06
NIPBL-201ENST00000282516 KANK2Q63ZY3 851 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 HINT2Q9BX68 163 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 DDX4Q9NQI0 724 aaKnown RBP8.42□□□□□ -1.06
NIPBL-201ENST00000282516 TAS2R9Q9NYW1 312 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 KLHL21Q9UJP4 597 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 B3GALT1Q9Y5Z6 326 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 ESPL1Q14674 2120 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 H0YAE9 185 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 VSX2P58304 361 aaPredicted RBP8.42□□□□□ -1.06
NIPBL-201ENST00000282516 TAS2R20P59543 309 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 VGLL4Q14135 290 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 LIPKQ5VXJ0 399 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 KCNIP4Q6PIL6 250 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 RDH10Q8IZV5 341 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 IQCF1Q8N6M8 205 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 MAPK15Q8TD08 544 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 ISOC1Q96CN7 298 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 ZNF599Q96NL3 588 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 SLC6A16Q9GZN6 736 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 COL20A1Q9P218 1284 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 H3BSH0 61 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 MSX1P28360 303 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 NR0B1P51843 470 aaKnown RBP8.42□□□□□ -1.06
NIPBL-201ENST00000282516 ERMP1Q7Z2K6 904 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 ADGRA1Q86SQ6 560 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 NPAS3Q8IXF0 933 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 ZNF610Q8N9Z0 462 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 C7orf57Q8NEG2 295 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 PIP5K1AQ99755 562 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 MANBAO00462 879 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 OAS1P00973 400 aaKnown RBP8.42□□□□□ -1.06
NIPBL-201ENST00000282516 POU6F2P78424 691 aaPredicted RBP8.42□□□□□ -1.06
NIPBL-201ENST00000282516 GRIK5Q16478 980 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 USP50Q70EL3 339 aaPredicted RBP8.42□□□□□ -1.06
NIPBL-201ENST00000282516 TSPAN10Q9H1Z9 355 aaPredicted RBP8.42□□□□□ -1.06
NIPBL-201ENST00000282516 SULT1C2O00338 296 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 KDELC1Q6UW63 502 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 EMID1Q96A84 441 aaPredicted RBP8.42□□□□□ -1.06
NIPBL-201ENST00000282516 PWWP2AQ96N64 755 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 CNTNAP3BQ96NU0 1288 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 HERC2P3Q9BVR0 1158 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 SRA1Q9HD15 236 aaKnown RBP8.42□□□□□ -1.06
NIPBL-201ENST00000282516 IRAK2O43187 625 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 CCL23P55773 120 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 MZT1Q08AG7 82 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 PPA1Q15181 289 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 ZC3H14Q6PJT7 736 aaKnown RBP8.42□□□□□ -1.06
NIPBL-201ENST00000282516 GTPBP8Q8N3Z3 284 aaPredicted RBP8.42□□□□□ -1.06
NIPBL-201ENST00000282516 ANKK1Q8NFD2 765 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 OR5B17Q8NGF7 314 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 PGAM5Q96HS1 289 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 SHDQ96IW2 340 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 UBXN10Q96LJ8 280 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 NAA11Q9BSU3 229 aaPredicted RBP8.42□□□□□ -1.06
NIPBL-201ENST00000282516 GCM1Q9NP62 436 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 EXTL2Q9UBQ6 330 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 KIF25Q9UIL4 384 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 MMP3P08254 477 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 PRKAR1BP31321 381 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 TMPRSS12Q86WS5 348 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 TRIB2Q92519 343 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 HAPLN3Q96S86 360 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 PAPOLGQ9BWT3 736 aaKnown RBP8.42□□□□□ -1.06
NIPBL-201ENST00000282516 ZFR2Q9UPR6 939 aaKnown RBP8.42□□□□□ -1.06
NIPBL-201ENST00000282516 A0A1B0GV50 99 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 SOX14O95416 240 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 ACP5P13686 325 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 DYRK1AQ13627 763 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 ARL6IP1Q15041 203 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 SLC27A4Q6P1M0 643 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 ARHGAP11AQ6P4F7 1023 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 CATSPERGQ6ZRH7 1159 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 HSPBAP1Q96EW2 488 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 HNRNPABQ99729 332 aaKnown RBP8.42□□□□□ -1.06
NIPBL-201ENST00000282516 ACSL5Q9ULC5 683 aa8.42□□□□□ -1.06
NIPBL-201ENST00000282516 TEX51A0A1B0GUA7 166 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 PCDH17O14917 1159 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 SC5DO75845 299 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 HEXBP07686 556 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 PTPN2P17706 415 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 NETO2Q8NC67 525 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 OR6N2Q8NGY6 317 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 SLC32A1Q9H598 525 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 SERTAD3Q9UJW9 196 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 VEGFDO43915 354 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 ZNF254O75437 659 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 AK4P27144 223 aaPredicted RBP8.41□□□□□ -1.06
NIPBL-201ENST00000282516 NFATC2Q13469 925 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 MAP1SQ66K74 1059 aaPredicted RBP8.41□□□□□ -1.06
NIPBL-201ENST00000282516 NCCRP1Q6ZVX7 275 aaPredicted RBP8.41□□□□□ -1.06
NIPBL-201ENST00000282516 CEACAM19Q7Z692 300 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms