RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 CADM1Q9BY67 442 aaKnown RBP4.33□□□□□ -1.72
CD44-202ENST00000278385 TKTL2Q9H0I9 626 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 MAGT1Q9H0U3 335 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 DNTTIP1Q9H147 329 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 UPF3AQ9H1J1 476 aaKnown RBP4.33□□□□□ -1.72
CD44-202ENST00000278385 BLZF1Q9H2G9 400 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 RGCCQ9H4X1 137 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 PCDH9Q9HC56 1237 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 ZFP14Q9HCL3 533 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 YAE1D1Q9NRH1 226 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 TMEM248Q9NWD8 314 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 C11orf21Q9P2W6 132 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 ONECUT1Q9UBC0 465 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 NLKQ9UBE8 527 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 DKK2Q9UBU2 259 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 PACSIN2Q9UNF0 486 aaPredicted RBP4.33□□□□□ -1.72
CD44-202ENST00000278385 KCNJ14Q9UNX9 436 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 PKP3Q9Y446 797 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 INSL6Q9Y581 213 aa4.33□□□□□ -1.72
CD44-202ENST00000278385 NAV1Q8NEY1 1877 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 MYO5AQ9Y4I1 1855 aaKnown RBP4.32□□□□□ -1.72
CD44-202ENST00000278385 RBBP6Q7Z6E9 1792 aaKnown RBP4.32□□□□□ -1.72
CD44-202ENST00000278385 KIAA0100Q14667 2235 aaKnown RBP4.32□□□□□ -1.72
CD44-202ENST00000278385 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.32□□□□□ -1.72
CD44-202ENST00000278385 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.32□□□□□ -1.72
CD44-202ENST00000278385 C1orf226A1L170 272 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 DUXAA6NLW8 204 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 OR2AG2A6NM03 316 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 LRRIQ3A6PVS8 624 aaPredicted RBP4.32□□□□□ -1.72
CD44-202ENST00000278385 E7EWF7 191 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 H0YHG0 523 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 SLC28A1O00337 649 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 DSCR3O14972 297 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 HDAC3O15379 428 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 FCMRO60667 390 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 ATP6V1G1O75348 118 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 CDK14O94921 469 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 KRT6AP02538 564 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 MT-ND1P03886 318 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 KRT19P08727 400 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 GOLGA8HP0CJ92 632 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 STAG3L1P0CL83 205 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 STAG3L2P0CL84 134 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 PTNP21246 168 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 PAICSP22234 425 aaKnown RBP4.32□□□□□ -1.72
CD44-202ENST00000278385 TUBG1P23258 451 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 ZFP36P26651 326 aaKnown RBP4.32□□□□□ -1.72
CD44-202ENST00000278385 CALML3P27482 149 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 AXLP30530 894 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 RRM2P31350 389 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 RORAP35398 523 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 DLSTP36957 453 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 SLC1A6P48664 564 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 RGS7P49802 495 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 ASCL1P50553 236 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 CLDN2P57739 230 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 SELENOVP59797 346 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 YWHAEP62258 255 aaKnown RBP4.32□□□□□ -1.72
CD44-202ENST00000278385 RPS6P62753 249 aaKnown RBP4.32□□□□□ -1.72
CD44-202ENST00000278385 BNC1Q01954 994 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 LY6KQ17RY6 165 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 ADPRMQ3LIE5 342 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 TMEM119Q4V9L6 283 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 FAM98BQ52LJ0 330 aaKnown RBP4.32□□□□□ -1.72
CD44-202ENST00000278385 ZNF311Q5JNZ3 666 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 RABGAP1LQ5R372 815 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 C6orf141Q5SZD1 244 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 WLSQ5T9L3 541 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 ATF7IP2Q5U623 682 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 TRILQ7L0X0 811 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 GRASPQ7Z6J2 395 aaPredicted RBP4.32□□□□□ -1.72
CD44-202ENST00000278385 ADGRD2Q7Z7M1 963 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 TMEM173Q86WV6 379 aaPredicted RBP4.32□□□□□ -1.72
CD44-202ENST00000278385 UBQLNLQ8IYU4 475 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 ADGRF4Q8IZF3 695 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 LRRC75A-AS1Q8N1F1 130 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 ASCC1Q8N9N2 400 aaKnown RBP4.32□□□□□ -1.72
CD44-202ENST00000278385 SRFBP1Q8NEF9 429 aaKnown RBP4.32□□□□□ -1.72
CD44-202ENST00000278385 EXD1Q8NHP7 514 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 ERMNQ8TAM6 284 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 CD300LFQ8TDQ1 290 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 OSCP1Q8WVF1 389 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 PIBF1Q8WXW3 757 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 FUBP1Q96AE4 644 aaKnown RBP4.32□□□□□ -1.72
CD44-202ENST00000278385 PRRC1Q96M27 445 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 FYTTD1Q96QD9 318 aaKnown RBP4.32□□□□□ -1.72
CD44-202ENST00000278385 TAAR6Q96RI8 345 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 CPNE1Q99829 537 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 SPATA16Q9BXB7 569 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 BBS2Q9BXC9 721 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 NUSAP1Q9BXS6 441 aaKnown RBP4.32□□□□□ -1.72
CD44-202ENST00000278385 FTHL17Q9BXU8 183 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 NUF2Q9BZD4 464 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 IL25Q9H293 177 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 LRRC19Q9H756 370 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 SAP30LQ9HAJ7 183 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 MED4Q9NPJ6 270 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 TUBG2Q9NRH3 451 aa4.32□□□□□ -1.72
CD44-202ENST00000278385 TAS2R14Q9NYV8 317 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms