RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 KCTD21Q4G0X4 260 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 CRB2Q5IJ48 1285 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 TJAP1Q5JTD0 557 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 NDUFAF5Q5TEU4 345 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 TTC23Q5W5X9 447 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 TMEM26Q6ZUK4 368 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 C6orf120Q7Z4R8 191 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 SATL1Q86VE3 508 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 DCP2Q8IU60 420 aaKnown RBP9.1□□□□□ -0.95
TRIM55-201ENST00000276573 OFCC1Q8IZS5 231 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 ZNF786Q8N393 782 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 FRMD1Q8N878 549 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 ACOT4Q8N9L9 421 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 OR8K5Q8NH50 307 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 PSMA8Q8TAA3 256 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 ZBED6CLQ96FA7 236 aaPredicted RBP9.1□□□□□ -0.95
TRIM55-201ENST00000276573 MUS81Q96NY9 551 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 OR2A14Q96R47 310 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 FAIM2Q9BWQ8 316 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 YTHDF1Q9BYJ9 559 aaKnown RBP9.1□□□□□ -0.95
TRIM55-201ENST00000276573 TCEAL2Q9H3H9 227 aaPredicted RBP9.1□□□□□ -0.95
TRIM55-201ENST00000276573 EPB41L1Q9H4G0 881 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 SIRT3Q9NTG7 399 aaPredicted RBP9.1□□□□□ -0.95
TRIM55-201ENST00000276573 SNX11Q9Y5W9 270 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 SPTY2D1-AS1A0A0U1RR47 76 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 SMIM31A0A1B0GVY4 71 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 A0A1W2PR48 441 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 OR2A25A4D2G3 310 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 OR6C74A6NCV1 312 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 TRIM64A6NGJ6 449 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 WASHC1A8K0Z3 465 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 HS6ST1O60243 411 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 GUCY1B2O75343 617 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 DIRAS1O95057 198 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 VIPP01282 170 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 THEGLP0DJG4 465 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 POLR2CP19387 275 aaPredicted RBP9.1□□□□□ -0.95
TRIM55-201ENST00000276573 CD6P30203 668 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 DNAJA1P31689 397 aaKnown RBP9.1□□□□□ -0.95
TRIM55-201ENST00000276573 NUDT1P36639 197 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 TSFMP43897 325 aaKnown RBP9.1□□□□□ -0.95
TRIM55-201ENST00000276573 RXRGP48443 463 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 CCT3P49368 545 aaKnown RBP9.1□□□□□ -0.95
TRIM55-201ENST00000276573 CDK9P50750 372 aaKnown RBP9.1□□□□□ -0.95
TRIM55-201ENST00000276573 ARHGDIAP52565 204 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 NR1H2P55055 460 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 DSTNP60981 165 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 STXBP1P61764 594 aaKnown RBP9.1□□□□□ -0.95
TRIM55-201ENST00000276573 GPR18Q14330 331 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 FZD2Q14332 565 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 GAS6Q14393 721 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 PLCL1Q15111 1095 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 CEP68Q76N32 757 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 VN1R4Q7Z5H5 301 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 SLC30A8Q8IWU4 369 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 TRIM48Q8IWZ4 208 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 METTL25Q8N6Q8 603 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 ARL10Q8N8L6 244 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 ZFP28Q8NHY6 868 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 NRBF2Q96F24 287 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 MBOAT4Q96T53 435 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 BARD1Q99728 777 aaKnown RBP9.1□□□□□ -0.95
TRIM55-201ENST00000276573 GSDMCQ9BYG8 508 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 NEUROD4Q9HD90 331 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 SLC35C2Q9NQQ7 365 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 GPR27Q9NS67 375 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 TMEFF2Q9UIK5 374 aaPredicted RBP9.1□□□□□ -0.95
TRIM55-201ENST00000276573 CA14Q9ULX7 337 aa9.1□□□□□ -0.95
TRIM55-201ENST00000276573 A0A1W2PPC4 97 aa9.09□□□□□ -0.95
TRIM55-201ENST00000276573 TRIM64CA6NLI5 447 aa9.09□□□□□ -0.95
TRIM55-201ENST00000276573 OR5K4A6NMS3 321 aa9.09□□□□□ -0.95
TRIM55-201ENST00000276573 MYO1GB0I1T2 1018 aa9.09□□□□□ -0.95
TRIM55-201ENST00000276573 PGRMC2O15173 223 aa9.09□□□□□ -0.95
TRIM55-201ENST00000276573 B4GALT2O60909 372 aa9.09□□□□□ -0.95
TRIM55-201ENST00000276573 IFNA14P01570 189 aa9.09□□□□□ -0.95
TRIM55-201ENST00000276573 UGT2B7P16662 529 aa9.09□□□□□ -0.95
TRIM55-201ENST00000276573 FPR1P21462 350 aa9.09□□□□□ -0.95
TRIM55-201ENST00000276573 DAPP51397 102 aa9.09□□□□□ -0.95
TRIM55-201ENST00000276573 RAD23AP54725 363 aa9.09□□□□□ -0.95
TRIM55-201ENST00000276573 PCBP3P57721 371 aaKnown RBP9.09□□□□□ -0.95
TRIM55-201ENST00000276573 RAB8AP61006 207 aa9.09□□□□□ -0.95
TRIM55-201ENST00000276573 TUBA4AP68366 448 aa9.09□□□□□ -0.95
TRIM55-201ENST00000276573 TGM3Q08188 693 aa9.09□□□□□ -0.95
TRIM55-201ENST00000276573 HSPB3Q12988 150 aa9.09□□□□□ -0.95
TRIM55-201ENST00000276573 FZD5Q13467 585 aa9.09□□□□□ -0.95
TRIM55-201ENST00000276573 RFX4Q33E94 735 aa9.09□□□□□ -0.95
TRIM55-201ENST00000276573 NADK2Q4G0N4 442 aa9.09□□□□□ -0.95
TRIM55-201ENST00000276573 ZNF542PQ5EBM4 170 aa9.09□□□□□ -0.95
TRIM55-201ENST00000276573 ZC3H12BQ5HYM0 836 aaKnown RBP9.09□□□□□ -0.95
TRIM55-201ENST00000276573 FIGLAQ6QHK4 219 aa9.09□□□□□ -0.95
TRIM55-201ENST00000276573 CEACAM20Q6UY09 585 aa9.09□□□□□ -0.95
TRIM55-201ENST00000276573 TSEN54Q7Z6J9 526 aaKnown RBP9.09□□□□□ -0.95
TRIM55-201ENST00000276573 HORMAD2Q8N7B1 307 aa9.09□□□□□ -0.95
TRIM55-201ENST00000276573 ZNF555Q8NEP9 628 aa9.09□□□□□ -0.95
TRIM55-201ENST00000276573 TSTD1Q8NFU3 115 aa9.09□□□□□ -0.95
TRIM55-201ENST00000276573 NT5CQ8TCD5 201 aa9.09□□□□□ -0.95
TRIM55-201ENST00000276573 PATE1Q8WXA2 126 aa9.09□□□□□ -0.95
TRIM55-201ENST00000276573 TAMM41Q96BW9 452 aa9.09□□□□□ -0.95
TRIM55-201ENST00000276573 TM4SF19Q96DZ7 209 aa9.09□□□□□ -0.95
TRIM55-201ENST00000276573 AMDHD1Q96NU7 426 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms