RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 SNX8Q9Y5X2 465 aa15.78■□□□□ 0.12
CCDC40-201ENST00000269318 U3KQV3 271 aa15.78■□□□□ 0.12
CCDC40-201ENST00000269318 TRIM64A6NGJ6 449 aa15.78■□□□□ 0.12
CCDC40-201ENST00000269318 AXIN1O15169 862 aa15.78■□□□□ 0.12
CCDC40-201ENST00000269318 TNFSF14O43557 240 aa15.78■□□□□ 0.12
CCDC40-201ENST00000269318 B4GALT2O60909 372 aa15.78■□□□□ 0.12
CCDC40-201ENST00000269318 E2F6O75461 281 aa15.78■□□□□ 0.12
CCDC40-201ENST00000269318 TSFMP43897 325 aaKnown RBP15.78■□□□□ 0.12
CCDC40-201ENST00000269318 RPL5P46777 297 aaKnown RBP15.78■□□□□ 0.12
CCDC40-201ENST00000269318 PRIM2P49643 509 aa15.78■□□□□ 0.12
CCDC40-201ENST00000269318 PCBP3P57721 371 aaKnown RBP15.78■□□□□ 0.12
CCDC40-201ENST00000269318 RPS15AP62244 130 aaKnown RBP15.78■□□□□ 0.12
CCDC40-201ENST00000269318 UBE2IP63279 158 aaKnown RBP15.78■□□□□ 0.12
CCDC40-201ENST00000269318 SELENOWP63302 87 aa15.78■□□□□ 0.12
CCDC40-201ENST00000269318 CDK6Q00534 326 aa15.78■□□□□ 0.12
CCDC40-201ENST00000269318 SLAMF1Q13291 335 aa15.78■□□□□ 0.12
CCDC40-201ENST00000269318 ELOAQ14241 798 aaKnown RBP15.78■□□□□ 0.12
CCDC40-201ENST00000269318 FZD2Q14332 565 aa15.78■□□□□ 0.12
CCDC40-201ENST00000269318 PLCL1Q15111 1095 aa15.78■□□□□ 0.12
CCDC40-201ENST00000269318 SKIV2LQ15477 1246 aaKnown RBP15.78■□□□□ 0.12
CCDC40-201ENST00000269318 TJAP1Q5JTD0 557 aa15.78■□□□□ 0.12
CCDC40-201ENST00000269318 OFCC1Q8IZS5 231 aa15.78■□□□□ 0.12
CCDC40-201ENST00000269318 METTL25Q8N6Q8 603 aa15.78■□□□□ 0.12
CCDC40-201ENST00000269318 TSTD1Q8NFU3 115 aa15.78■□□□□ 0.12
CCDC40-201ENST00000269318 TSPAN14Q8NG11 270 aa15.78■□□□□ 0.12
CCDC40-201ENST00000269318 PATE1Q8WXA2 126 aa15.78■□□□□ 0.12
CCDC40-201ENST00000269318 TPD52L3Q96J77 140 aa15.78■□□□□ 0.12
CCDC40-201ENST00000269318 MBOAT4Q96T53 435 aa15.78■□□□□ 0.12
CCDC40-201ENST00000269318 GABARAPL1Q9H0R8 117 aa15.78■□□□□ 0.12
CCDC40-201ENST00000269318 TOR3AQ9H497 397 aa15.78■□□□□ 0.12
CCDC40-201ENST00000269318 CLK4Q9HAZ1 481 aaKnown RBP15.78■□□□□ 0.12
CCDC40-201ENST00000269318 IFT80Q9P2H3 777 aaPredicted RBP15.78■□□□□ 0.12
CCDC40-201ENST00000269318 SLCO1B1Q9Y6L6 691 aa15.78■□□□□ 0.12
CCDC40-201ENST00000269318 A0A1W2PPC4 97 aa15.77■□□□□ 0.12
CCDC40-201ENST00000269318 A0A1W2PR48 441 aa15.77■□□□□ 0.12
CCDC40-201ENST00000269318 ZW10O43264 779 aa15.77■□□□□ 0.12
CCDC40-201ENST00000269318 DPM1O60762 260 aa15.77■□□□□ 0.12
CCDC40-201ENST00000269318 CELA2BP08218 269 aaPredicted RBP15.77■□□□□ 0.12
CCDC40-201ENST00000269318 THEGLP0DJG4 465 aa15.77■□□□□ 0.12
CCDC40-201ENST00000269318 ATP6V1B1P15313 513 aa15.77■□□□□ 0.12
CCDC40-201ENST00000269318 UGT2B7P16662 529 aa15.77■□□□□ 0.12
CCDC40-201ENST00000269318 PRKACGP22612 351 aa15.77■□□□□ 0.12
CCDC40-201ENST00000269318 NUDT1P36639 197 aa15.77■□□□□ 0.12
CCDC40-201ENST00000269318 CDK9P50750 372 aaKnown RBP15.77■□□□□ 0.12
CCDC40-201ENST00000269318 ITGA1P56199 1179 aa15.77■□□□□ 0.12
CCDC40-201ENST00000269318 HSPB3Q12988 150 aa15.77■□□□□ 0.12
CCDC40-201ENST00000269318 KCTD21Q4G0X4 260 aa15.77■□□□□ 0.12
CCDC40-201ENST00000269318 CEP68Q76N32 757 aa15.77■□□□□ 0.12
CCDC40-201ENST00000269318 TSEN54Q7Z6J9 526 aaKnown RBP15.77■□□□□ 0.12
CCDC40-201ENST00000269318 TRIM73Q86UV7 250 aa15.77■□□□□ 0.12
CCDC40-201ENST00000269318 SATL1Q86VE3 508 aa15.77■□□□□ 0.12
CCDC40-201ENST00000269318 SRFBP1Q8NEF9 429 aaKnown RBP15.77■□□□□ 0.12
CCDC40-201ENST00000269318 TAMM41Q96BW9 452 aa15.77■□□□□ 0.12
CCDC40-201ENST00000269318 FCRL4Q96PJ5 515 aa15.77■□□□□ 0.12
CCDC40-201ENST00000269318 MYCBPQ99417 103 aaPredicted RBP15.77■□□□□ 0.12
CCDC40-201ENST00000269318 BARD1Q99728 777 aaKnown RBP15.77■□□□□ 0.12
CCDC40-201ENST00000269318 FAIM2Q9BWQ8 316 aa15.77■□□□□ 0.12
CCDC40-201ENST00000269318 GSDMCQ9BYG8 508 aa15.77■□□□□ 0.12
CCDC40-201ENST00000269318 POT1Q9NUX5 634 aa15.77■□□□□ 0.12
CCDC40-201ENST00000269318 TMEFF2Q9UIK5 374 aaPredicted RBP15.77■□□□□ 0.12
CCDC40-201ENST00000269318 PADI2Q9Y2J8 665 aa15.77■□□□□ 0.12
CCDC40-201ENST00000269318 ATG4BQ9Y4P1 393 aa15.77■□□□□ 0.12
CCDC40-201ENST00000269318 WASHC1A8K0Z3 465 aa15.76■□□□□ 0.11
CCDC40-201ENST00000269318 PRKRAO75569 313 aaKnown RBP15.76■□□□□ 0.11
CCDC40-201ENST00000269318 DIRAS1O95057 198 aa15.76■□□□□ 0.11
CCDC40-201ENST00000269318 DSTNP60981 165 aa15.76■□□□□ 0.11
CCDC40-201ENST00000269318 STXBP1P61764 594 aaKnown RBP15.76■□□□□ 0.11
CCDC40-201ENST00000269318 EPS8Q12929 822 aa15.76■□□□□ 0.11
CCDC40-201ENST00000269318 ZNF542PQ5EBM4 170 aa15.76■□□□□ 0.11
CCDC40-201ENST00000269318 CRB2Q5IJ48 1285 aa15.76■□□□□ 0.11
CCDC40-201ENST00000269318 FBXO42Q6P3S6 717 aa15.76■□□□□ 0.11
CCDC40-201ENST00000269318 TTC33Q6PID6 262 aaPredicted RBP15.76■□□□□ 0.11
CCDC40-201ENST00000269318 SFTPA2Q8IWL1 248 aa15.76■□□□□ 0.11
CCDC40-201ENST00000269318 TRIM48Q8IWZ4 208 aa15.76■□□□□ 0.11
CCDC40-201ENST00000269318 FAM160A2Q8N612 972 aaPredicted RBP15.76■□□□□ 0.11
CCDC40-201ENST00000269318 NT5CQ8TCD5 201 aa15.76■□□□□ 0.11
CCDC40-201ENST00000269318 RLN3Q8WXF3 142 aa15.76■□□□□ 0.11
CCDC40-201ENST00000269318 AMBRA1Q9C0C7 1298 aa15.76■□□□□ 0.11
CCDC40-201ENST00000269318 EPB41L1Q9H4G0 881 aa15.76■□□□□ 0.11
CCDC40-201ENST00000269318 SLC35C2Q9NQQ7 365 aa15.76■□□□□ 0.11
CCDC40-201ENST00000269318 ACTR10Q9NZ32 417 aa15.76■□□□□ 0.11
CCDC40-201ENST00000269318 CPNE7Q9UBL6 633 aa15.76■□□□□ 0.11
CCDC40-201ENST00000269318 TRIOO75962 3097 aa15.76■□□□□ 0.11
CCDC40-201ENST00000269318 MDC1Q14676 2089 aaKnown RBP15.76■□□□□ 0.11
CCDC40-201ENST00000269318 IGHV1OR15-9A0A0B4J2B8 117 aa15.76■□□□□ 0.11
CCDC40-201ENST00000269318 OR6C74A6NCV1 312 aa15.76■□□□□ 0.11
CCDC40-201ENST00000269318 VIPP01282 170 aa15.76■□□□□ 0.11
CCDC40-201ENST00000269318 POLR2CP19387 275 aaPredicted RBP15.76■□□□□ 0.11
CCDC40-201ENST00000269318 MAGP20916 626 aa15.76■□□□□ 0.11
CCDC40-201ENST00000269318 CERS1P27544 350 aa15.76■□□□□ 0.11
CCDC40-201ENST00000269318 RAB8AP61006 207 aa15.76■□□□□ 0.11
CCDC40-201ENST00000269318 ZNF786Q8N393 782 aa15.76■□□□□ 0.11
CCDC40-201ENST00000269318 HORMAD2Q8N7B1 307 aa15.76■□□□□ 0.11
CCDC40-201ENST00000269318 ZFP28Q8NHY6 868 aa15.76■□□□□ 0.11
CCDC40-201ENST00000269318 TM4SF19Q96DZ7 209 aa15.76■□□□□ 0.11
CCDC40-201ENST00000269318 AMDHD1Q96NU7 426 aa15.76■□□□□ 0.11
CCDC40-201ENST00000269318 MUS81Q96NY9 551 aa15.76■□□□□ 0.11
CCDC40-201ENST00000269318 GLIPR2Q9H4G4 154 aa15.76■□□□□ 0.11
CCDC40-201ENST00000269318 FAM118AQ9NWS6 357 aa15.76■□□□□ 0.11
CCDC40-201ENST00000269318 KIR2DS5A0A0G2JLQ3 304 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms