RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 TAS2R9Q9NYW1 312 aa14.59□□□□□ -0.07
COPS3-201ENST00000268717 USP22Q9UPT9 525 aa14.59□□□□□ -0.07
COPS3-201ENST00000268717 A0A1W2PRB8 838 aa14.58□□□□□ -0.08
COPS3-201ENST00000268717 B4DGG1 531 aa14.58□□□□□ -0.08
COPS3-201ENST00000268717 CXCR6O00574 342 aa14.58□□□□□ -0.08
COPS3-201ENST00000268717 AQP9O43315 295 aa14.58□□□□□ -0.08
COPS3-201ENST00000268717 ERI3O43414 337 aaKnown RBP14.58□□□□□ -0.08
COPS3-201ENST00000268717 BMP2P12643 396 aa14.58□□□□□ -0.08
COPS3-201ENST00000268717 HOXB3P14651 431 aaPredicted RBP14.58□□□□□ -0.08
COPS3-201ENST00000268717 NCK1P16333 377 aa14.58□□□□□ -0.08
COPS3-201ENST00000268717 ATP6V1C1P21283 382 aa14.58□□□□□ -0.08
COPS3-201ENST00000268717 ATP5A1P25705 553 aaKnown RBP14.58□□□□□ -0.08
COPS3-201ENST00000268717 PLA2G16P53816 162 aa14.58□□□□□ -0.08
COPS3-201ENST00000268717 VEZF1Q14119 521 aa14.58□□□□□ -0.08
COPS3-201ENST00000268717 TAF11Q15544 211 aa14.58□□□□□ -0.08
COPS3-201ENST00000268717 TOR1AIP1Q5JTV8 583 aa14.58□□□□□ -0.08
COPS3-201ENST00000268717 SWT1Q5T5J6 900 aaKnown RBP14.58□□□□□ -0.08
COPS3-201ENST00000268717 FBXO42Q6P3S6 717 aa14.58□□□□□ -0.08
COPS3-201ENST00000268717 ZNF793Q6ZN11 406 aa14.58□□□□□ -0.08
COPS3-201ENST00000268717 EID3Q8N140 333 aa14.58□□□□□ -0.08
COPS3-201ENST00000268717 LMX1AQ8TE12 382 aa14.58□□□□□ -0.08
COPS3-201ENST00000268717 OR5P2Q8WZ92 322 aa14.58□□□□□ -0.08
COPS3-201ENST00000268717 ZFYVE21Q9BQ24 234 aa14.58□□□□□ -0.08
COPS3-201ENST00000268717 CHST8Q9H2A9 424 aa14.58□□□□□ -0.08
COPS3-201ENST00000268717 YY1AP1Q9H869 796 aa14.58□□□□□ -0.08
COPS3-201ENST00000268717 PRDM9Q9NQV7 894 aa14.58□□□□□ -0.08
COPS3-201ENST00000268717 ACSS1Q9NUB1 689 aaPredicted RBP14.58□□□□□ -0.08
COPS3-201ENST00000268717 LYARQ9NX58 379 aaKnown RBP14.58□□□□□ -0.08
COPS3-201ENST00000268717 POMT2Q9UKY4 750 aa14.58□□□□□ -0.08
COPS3-201ENST00000268717 CROCCQ5TZA2 2017 aa14.57□□□□□ -0.08
COPS3-201ENST00000268717 H0YJX3 145 aa14.57□□□□□ -0.08
COPS3-201ENST00000268717 KCNK5O95279 499 aa14.57□□□□□ -0.08
COPS3-201ENST00000268717 CER1O95813 267 aa14.57□□□□□ -0.08
COPS3-201ENST00000268717 FAM58BPP0C7Q3 252 aa14.57□□□□□ -0.08
COPS3-201ENST00000268717 C21orf59P57076 290 aa14.57□□□□□ -0.08
COPS3-201ENST00000268717 PCBP4P57723 403 aaKnown RBP14.57□□□□□ -0.08
COPS3-201ENST00000268717 HBA1P69905 142 aa14.57□□□□□ -0.08
COPS3-201ENST00000268717 VAC14Q08AM6 782 aa14.57□□□□□ -0.08
COPS3-201ENST00000268717 FADDQ13158 208 aa14.57□□□□□ -0.08
COPS3-201ENST00000268717 GAB1Q13480 694 aa14.57□□□□□ -0.08
COPS3-201ENST00000268717 HLA-BQ31612 363 aa14.57□□□□□ -0.08
COPS3-201ENST00000268717 IZUMO2Q6UXV1 221 aa14.57□□□□□ -0.08
COPS3-201ENST00000268717 PDSS2Q86YH6 399 aa14.57□□□□□ -0.08
COPS3-201ENST00000268717 KBTBD2Q8IY47 623 aa14.57□□□□□ -0.08
COPS3-201ENST00000268717 ZNF655Q8N720 491 aaPredicted RBP14.57□□□□□ -0.08
COPS3-201ENST00000268717 ANKFN1Q8N957 763 aa14.57□□□□□ -0.08
COPS3-201ENST00000268717 ACOT4Q8N9L9 421 aa14.57□□□□□ -0.08
COPS3-201ENST00000268717 CAMKVQ8NCB2 501 aa14.57□□□□□ -0.08
COPS3-201ENST00000268717 PSMA8Q8TAA3 256 aa14.57□□□□□ -0.08
COPS3-201ENST00000268717 NAF1Q96HR8 494 aaKnown RBP14.57□□□□□ -0.08
COPS3-201ENST00000268717 UGT2B28Q9BY64 529 aa14.57□□□□□ -0.08
COPS3-201ENST00000268717 KLHL31Q9H511 634 aa14.57□□□□□ -0.08
COPS3-201ENST00000268717 PIF1Q9H611 641 aa14.57□□□□□ -0.08
COPS3-201ENST00000268717 GAREM1Q9H706 876 aa14.57□□□□□ -0.08
COPS3-201ENST00000268717 AGPAT4Q9NRZ5 378 aa14.57□□□□□ -0.08
COPS3-201ENST00000268717 DOLKQ9UPQ8 538 aa14.57□□□□□ -0.08
COPS3-201ENST00000268717 KLHL20Q9Y2M5 609 aa14.57□□□□□ -0.08
COPS3-201ENST00000268717 SNX11Q9Y5W9 270 aa14.57□□□□□ -0.08
COPS3-201ENST00000268717 MED19A0JLT2 244 aaPredicted RBP14.56□□□□□ -0.08
COPS3-201ENST00000268717 PDPK1O15530 556 aa14.56□□□□□ -0.08
COPS3-201ENST00000268717 ZSCAN9O15535 394 aaPredicted RBP14.56□□□□□ -0.08
COPS3-201ENST00000268717 NOBOXO60393 691 aa14.56□□□□□ -0.08
COPS3-201ENST00000268717 C6orf47O95873 294 aa14.56□□□□□ -0.08
COPS3-201ENST00000268717 SMIM10L1P0DMW3 83 aa14.56□□□□□ -0.08
COPS3-201ENST00000268717 CSRP1P21291 193 aaKnown RBP14.56□□□□□ -0.08
COPS3-201ENST00000268717 ZNF10P21506 573 aaPredicted RBP14.56□□□□□ -0.08
COPS3-201ENST00000268717 FASP25445 335 aa14.56□□□□□ -0.08
COPS3-201ENST00000268717 SLC14A1Q13336 389 aa14.56□□□□□ -0.08
COPS3-201ENST00000268717 VMACQ2NL98 169 aa14.56□□□□□ -0.08
COPS3-201ENST00000268717 FAM98BQ52LJ0 330 aaKnown RBP14.56□□□□□ -0.08
COPS3-201ENST00000268717 LPCAT4Q643R3 524 aa14.56□□□□□ -0.08
COPS3-201ENST00000268717 ARMC6Q6NXE6 501 aa14.56□□□□□ -0.08
COPS3-201ENST00000268717 FKBP9P1Q75LS8 142 aa14.56□□□□□ -0.08
COPS3-201ENST00000268717 ZNF551Q7Z340 670 aaPredicted RBP14.56□□□□□ -0.08
COPS3-201ENST00000268717 PIP4P1Q86T03 277 aa14.56□□□□□ -0.08
COPS3-201ENST00000268717 TRIM73Q86UV7 250 aa14.56□□□□□ -0.08
COPS3-201ENST00000268717 ARL14Q8N4G2 192 aa14.56□□□□□ -0.08
COPS3-201ENST00000268717 OR52N2Q8NGI0 321 aa14.56□□□□□ -0.08
COPS3-201ENST00000268717 LRTOMTQ8WZ04 291 aa14.56□□□□□ -0.08
COPS3-201ENST00000268717 FIG4Q92562 907 aa14.56□□□□□ -0.08
COPS3-201ENST00000268717 ZBED6CLQ96FA7 236 aaPredicted RBP14.56□□□□□ -0.08
COPS3-201ENST00000268717 SMIM10Q96HG1 83 aa14.56□□□□□ -0.08
COPS3-201ENST00000268717 BTBD9Q96Q07 612 aa14.56□□□□□ -0.08
COPS3-201ENST00000268717 VCXQ9H320 206 aa14.56□□□□□ -0.08
COPS3-201ENST00000268717 MAGIXQ9H6Y5 334 aa14.56□□□□□ -0.08
COPS3-201ENST00000268717 IL21RQ9HBE5 538 aa14.56□□□□□ -0.08
COPS3-201ENST00000268717 C8orf4Q9NR00 106 aa14.56□□□□□ -0.08
COPS3-201ENST00000268717 DCAF13Q9NV06 445 aaKnown RBP14.56□□□□□ -0.08
COPS3-201ENST00000268717 AURKCQ9UQB9 309 aa14.56□□□□□ -0.08
COPS3-201ENST00000268717 LRCH1Q9Y2L9 728 aa14.56□□□□□ -0.08
COPS3-201ENST00000268717 DTNAQ9Y4J8 743 aa14.56□□□□□ -0.08
COPS3-201ENST00000268717 ASB4Q9Y574 426 aa14.56□□□□□ -0.08
COPS3-201ENST00000268717 CSNK1G3Q9Y6M4 447 aa14.56□□□□□ -0.08
COPS3-201ENST00000268717 C4orf51C9J302 202 aa14.55□□□□□ -0.08
COPS3-201ENST00000268717 CTSVO60911 334 aa14.55□□□□□ -0.08
COPS3-201ENST00000268717 CREG1O75629 220 aa14.55□□□□□ -0.08
COPS3-201ENST00000268717 KRT75O95678 551 aa14.55□□□□□ -0.08
COPS3-201ENST00000268717 ZNF883P0CG24 379 aa14.55□□□□□ -0.08
COPS3-201ENST00000268717 RAP2AP10114 183 aa14.55□□□□□ -0.08
COPS3-201ENST00000268717 CD59P13987 128 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 407.3 ms