RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 LSM11P83369 360 aaKnown RBP eCLIP16.12■□□□□ 0.17
RTN1-201ENST00000267484 C19orf48Q6RUI8 117 aa16.12■□□□□ 0.17
RTN1-201ENST00000267484 MEX3DQ86XN8 651 aaKnown RBP16.12■□□□□ 0.17
RTN1-201ENST00000267484 CYB5D2Q8WUJ1 264 aa16.12■□□□□ 0.17
RTN1-201ENST00000267484 PIK3R3Q92569 461 aa16.12■□□□□ 0.17
RTN1-201ENST00000267484 ACAT2Q9BWD1 397 aa16.12■□□□□ 0.17
RTN1-201ENST00000267484 PPIL1Q9Y3C6 166 aa16.12■□□□□ 0.17
RTN1-201ENST00000267484 V9GYH0 126 aa16.12■□□□□ 0.17
RTN1-201ENST00000267484 A0A1W2PRB8 838 aa16.12■□□□□ 0.17
RTN1-201ENST00000267484 IFNW1P05000 195 aa16.12■□□□□ 0.17
RTN1-201ENST00000267484 BCHEP06276 602 aa16.12■□□□□ 0.17
RTN1-201ENST00000267484 HBQ1P09105 142 aa16.12■□□□□ 0.17
RTN1-201ENST00000267484 TRIM40Q6P9F5 258 aa16.12■□□□□ 0.17
RTN1-201ENST00000267484 TMEM220Q6QAJ8 160 aa16.12■□□□□ 0.17
RTN1-201ENST00000267484 TMIGD1Q6UXZ0 262 aa16.12■□□□□ 0.17
RTN1-201ENST00000267484 GDPD4Q6W3E5 623 aa16.12■□□□□ 0.17
RTN1-201ENST00000267484 ZNF517Q6ZMY9 492 aaPredicted RBP16.12■□□□□ 0.17
RTN1-201ENST00000267484 NLRP8Q86W28 1048 aa16.12■□□□□ 0.17
RTN1-201ENST00000267484 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.12■□□□□ 0.17
RTN1-201ENST00000267484 C19orf43Q9BQ61 176 aa16.12■□□□□ 0.17
RTN1-201ENST00000267484 SLC6A16Q9GZN6 736 aa16.12■□□□□ 0.17
RTN1-201ENST00000267484 MOV10Q9HCE1 1003 aaKnown RBP16.12■□□□□ 0.17
RTN1-201ENST00000267484 ATP6V1HQ9UI12 483 aa16.12■□□□□ 0.17
RTN1-201ENST00000267484 SNX11Q9Y5W9 270 aa16.12■□□□□ 0.17
RTN1-201ENST00000267484 A0A1W2PQ09 198 aa16.12■□□□□ 0.17
RTN1-201ENST00000267484 NEDD8-MDP1E9PL57 170 aa16.12■□□□□ 0.17
RTN1-201ENST00000267484 RTCAO00442 366 aaKnown RBP16.12■□□□□ 0.17
RTN1-201ENST00000267484 PLD2O14939 933 aa16.12■□□□□ 0.17
RTN1-201ENST00000267484 KRT75O95678 551 aa16.12■□□□□ 0.17
RTN1-201ENST00000267484 EFEMP2O95967 443 aa16.12■□□□□ 0.17
RTN1-201ENST00000267484 CYP17A1P05093 508 aa16.12■□□□□ 0.17
RTN1-201ENST00000267484 DEF8Q6ZN54 512 aa16.12■□□□□ 0.17
RTN1-201ENST00000267484 C11orf74Q86VG3 221 aa16.12■□□□□ 0.17
RTN1-201ENST00000267484 OR56A3Q8NH54 315 aa16.12■□□□□ 0.17
RTN1-201ENST00000267484 SLC6A18Q96N87 628 aa16.12■□□□□ 0.17
RTN1-201ENST00000267484 CXorf36Q9H7Y0 433 aa16.12■□□□□ 0.17
RTN1-201ENST00000267484 YARS2Q9Y2Z4 477 aaKnown RBP16.12■□□□□ 0.17
RTN1-201ENST00000267484 PLXND1Q9Y4D7 1925 aa16.11■□□□□ 0.17
RTN1-201ENST00000267484 OR10H3O60404 316 aa16.11■□□□□ 0.17
RTN1-201ENST00000267484 GPR37L1O60883 481 aa16.11■□□□□ 0.17
RTN1-201ENST00000267484 GUCY1B2O75343 617 aa16.11■□□□□ 0.17
RTN1-201ENST00000267484 LEFTY1O75610 366 aa16.11■□□□□ 0.17
RTN1-201ENST00000267484 CSF2P04141 144 aa16.11■□□□□ 0.17
RTN1-201ENST00000267484 NPPBP16860 134 aa16.11■□□□□ 0.17
RTN1-201ENST00000267484 WEE1P30291 646 aa16.11■□□□□ 0.17
RTN1-201ENST00000267484 ETV6P41212 452 aa16.11■□□□□ 0.17
RTN1-201ENST00000267484 FCHO2Q0JRZ9 810 aa16.11■□□□□ 0.17
RTN1-201ENST00000267484 TMPRSS11AQ6ZMR5 421 aa16.11■□□□□ 0.17
RTN1-201ENST00000267484 LAS2Q8IYD9 372 aa16.11■□□□□ 0.17
RTN1-201ENST00000267484 OXR1Q8N573 874 aa16.11■□□□□ 0.17
RTN1-201ENST00000267484 TCEANCQ8N8B7 351 aa16.11■□□□□ 0.17
RTN1-201ENST00000267484 OR2A12Q8NGT7 310 aa16.11■□□□□ 0.17
RTN1-201ENST00000267484 HS3ST2Q9Y278 367 aa16.11■□□□□ 0.17
RTN1-201ENST00000267484 HOXC11O43248 304 aaPredicted RBP16.11■□□□□ 0.17
RTN1-201ENST00000267484 OLFM2O95897 454 aa16.11■□□□□ 0.17
RTN1-201ENST00000267484 HSD3B1P14060 373 aa16.11■□□□□ 0.17
RTN1-201ENST00000267484 TNNI3P19429 210 aa16.11■□□□□ 0.17
RTN1-201ENST00000267484 HSD3B2P26439 372 aa16.11■□□□□ 0.17
RTN1-201ENST00000267484 GPR50Q13585 617 aa16.11■□□□□ 0.17
RTN1-201ENST00000267484 SPHARQ15513 63 aa16.11■□□□□ 0.17
RTN1-201ENST00000267484 FAM214AQ32MH5 1076 aa16.11■□□□□ 0.17
RTN1-201ENST00000267484 TIMM50Q3ZCQ8 353 aa16.11■□□□□ 0.17
RTN1-201ENST00000267484 ARSIQ5FYB1 569 aa16.11■□□□□ 0.17
RTN1-201ENST00000267484 ZNF770Q6IQ21 691 aaPredicted RBP16.11■□□□□ 0.17
RTN1-201ENST00000267484 ZNF544Q6NX49 715 aa16.11■□□□□ 0.17
RTN1-201ENST00000267484 CEACAM20Q6UY09 585 aa16.11■□□□□ 0.17
RTN1-201ENST00000267484 FAM46DQ8NEK8 389 aa16.11■□□□□ 0.17
RTN1-201ENST00000267484 C9orf43Q8TAL5 461 aaPredicted RBP16.11■□□□□ 0.17
RTN1-201ENST00000267484 OTUB1Q96FW1 271 aaPredicted RBP16.11■□□□□ 0.17
RTN1-201ENST00000267484 ST6GAL2Q96JF0 529 aa16.11■□□□□ 0.17
RTN1-201ENST00000267484 IL17FQ96PD4 163 aa16.11■□□□□ 0.17
RTN1-201ENST00000267484 MAPKAP1Q9BPZ7 522 aa16.11■□□□□ 0.17
RTN1-201ENST00000267484 POLR2J2Q9GZM3 115 aaKnown RBP16.11■□□□□ 0.17
RTN1-201ENST00000267484 RC3H2Q9HBD1 1191 aaKnown RBP16.11■□□□□ 0.17
RTN1-201ENST00000267484 DYRK4Q9NR20 520 aa16.11■□□□□ 0.17
RTN1-201ENST00000267484 MN1Q10571 1320 aaPredicted RBP16.11■□□□□ 0.17
RTN1-201ENST00000267484 SNX4O95219 450 aa16.1■□□□□ 0.17
RTN1-201ENST00000267484 CRYBB2P43320 205 aa16.1■□□□□ 0.17
RTN1-201ENST00000267484 KCNC3Q14003 757 aa16.1■□□□□ 0.17
RTN1-201ENST00000267484 TBRG1Q3YBR2 411 aa16.1■□□□□ 0.17
RTN1-201ENST00000267484 CRB2Q5IJ48 1285 aa16.1■□□□□ 0.17
RTN1-201ENST00000267484 THOC7Q6I9Y2 204 aaKnown RBP16.1■□□□□ 0.17
RTN1-201ENST00000267484 CCDC80Q76M96 950 aa16.1■□□□□ 0.17
RTN1-201ENST00000267484 RASGRP3Q8IV61 690 aa16.1■□□□□ 0.17
RTN1-201ENST00000267484 MAGEB10Q96LZ2 347 aaPredicted RBP16.1■□□□□ 0.17
RTN1-201ENST00000267484 DMRT3Q9NQL9 472 aa16.1■□□□□ 0.17
RTN1-201ENST00000267484 CTPS2Q9NRF8 586 aa16.1■□□□□ 0.17
RTN1-201ENST00000267484 GULP1Q9UBP9 304 aa16.1■□□□□ 0.17
RTN1-201ENST00000267484 PLAGL1Q9UM63 463 aa16.1■□□□□ 0.17
RTN1-201ENST00000267484 PIPSLA2A3N6 862 aa16.1■□□□□ 0.17
RTN1-201ENST00000267484 ANKRD34BA5PLL1 514 aa16.1■□□□□ 0.17
RTN1-201ENST00000267484 LEFTY2O00292 366 aa16.1■□□□□ 0.17
RTN1-201ENST00000267484 PQBP1O60828 265 aaKnown RBP16.1■□□□□ 0.17
RTN1-201ENST00000267484 SOD2P04179 222 aa16.1■□□□□ 0.17
RTN1-201ENST00000267484 SCG5P05408 212 aa16.1■□□□□ 0.17
RTN1-201ENST00000267484 CTSAP10619 480 aa16.1■□□□□ 0.17
RTN1-201ENST00000267484 CD72P21854 359 aa16.1■□□□□ 0.17
RTN1-201ENST00000267484 PCBP3P57721 371 aaKnown RBP16.1■□□□□ 0.17
RTN1-201ENST00000267484 TLE2Q04725 743 aa16.1■□□□□ 0.17
RTN1-201ENST00000267484 KRR1Q13601 381 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms