RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 LYRM4Q9HD34 91 aa21.45■■□□□ 1.03
UFD1-201ENST00000263202 SPAG4Q9NPE6 437 aa21.45■■□□□ 1.03
UFD1-201ENST00000263202 FGF21Q9NSA1 209 aa21.45■■□□□ 1.03
UFD1-201ENST00000263202 C5AR2Q9P296 337 aa21.45■■□□□ 1.03
UFD1-201ENST00000263202 BTNL2Q9UIR0 455 aa21.45■■□□□ 1.03
UFD1-201ENST00000263202 A0A096LPI6 279 aa21.45■■□□□ 1.02
UFD1-201ENST00000263202 SGK494L7N484 410 aa21.45■■□□□ 1.02
UFD1-201ENST00000263202 ERN1O75460 977 aaKnown RBP21.45■■□□□ 1.02
UFD1-201ENST00000263202 HOXB9P17482 250 aaPredicted RBP21.45■■□□□ 1.02
UFD1-201ENST00000263202 SLC6A2P23975 617 aa21.45■■□□□ 1.02
UFD1-201ENST00000263202 CDKN2CP42773 168 aa21.45■■□□□ 1.02
UFD1-201ENST00000263202 PRMT9Q6P2P2 845 aa21.45■■□□□ 1.02
UFD1-201ENST00000263202 PGM2L1Q6PCE3 622 aa21.45■■□□□ 1.02
UFD1-201ENST00000263202 SCUBE1Q8IWY4 988 aa21.45■■□□□ 1.02
UFD1-201ENST00000263202 TTC29Q8NA56 475 aaPredicted RBP21.45■■□□□ 1.02
UFD1-201ENST00000263202 OR5T3Q8NGG3 340 aa21.45■■□□□ 1.02
UFD1-201ENST00000263202 DNAJB14Q8TBM8 379 aa21.45■■□□□ 1.02
UFD1-201ENST00000263202 CCDC115Q96NT0 180 aa21.45■■□□□ 1.02
UFD1-201ENST00000263202 CGREF1Q99674 301 aa21.45■■□□□ 1.02
UFD1-201ENST00000263202 NPLQ9BXD5 320 aaPredicted RBP21.45■■□□□ 1.02
UFD1-201ENST00000263202 SLC6A13Q9NSD5 602 aa21.45■■□□□ 1.02
UFD1-201ENST00000263202 TAS2R7Q9NYW3 318 aa21.45■■□□□ 1.02
UFD1-201ENST00000263202 VAPAQ9P0L0 249 aa21.45■■□□□ 1.02
UFD1-201ENST00000263202 TMEM181Q9P2C4 612 aa21.45■■□□□ 1.02
UFD1-201ENST00000263202 ERVK-11Q9UQG0 969 aa21.45■■□□□ 1.02
UFD1-201ENST00000263202 A0A0A6YYC8 382 aaPredicted RBP21.44■■□□□ 1.02
UFD1-201ENST00000263202 GLOD5A6NK44 160 aa21.44■■□□□ 1.02
UFD1-201ENST00000263202 I3L1I5 382 aaPredicted RBP21.44■■□□□ 1.02
UFD1-201ENST00000263202 RFXANKO14593 260 aa21.44■■□□□ 1.02
UFD1-201ENST00000263202 PGRMC2O15173 223 aa21.44■■□□□ 1.02
UFD1-201ENST00000263202 CPN2P22792 545 aa21.44■■□□□ 1.02
UFD1-201ENST00000263202 PTPN6P29350 595 aa21.44■■□□□ 1.02
UFD1-201ENST00000263202 TRPC1P48995 793 aa21.44■■□□□ 1.02
UFD1-201ENST00000263202 HNRNPFP52597 415 aaKnown RBP21.44■■□□□ 1.02
UFD1-201ENST00000263202 ITGA1P56199 1179 aa21.44■■□□□ 1.02
UFD1-201ENST00000263202 TNFRSF17Q02223 184 aa21.44■■□□□ 1.02
UFD1-201ENST00000263202 DNAJC14Q6Y2X3 702 aaPredicted RBP21.44■■□□□ 1.02
UFD1-201ENST00000263202 MSRB3Q8IXL7 192 aa21.44■■□□□ 1.02
UFD1-201ENST00000263202 CA13Q8N1Q1 262 aa21.44■■□□□ 1.02
UFD1-201ENST00000263202 FANCEQ9HB96 536 aa21.44■■□□□ 1.02
UFD1-201ENST00000263202 MS4A12Q9NXJ0 267 aa21.44■■□□□ 1.02
UFD1-201ENST00000263202 SLC25A37Q9NYZ2 338 aa21.44■■□□□ 1.02
UFD1-201ENST00000263202 ADA2Q9NZK5 511 aa21.44■■□□□ 1.02
UFD1-201ENST00000263202 SERTAD3Q9UJW9 196 aa21.44■■□□□ 1.02
UFD1-201ENST00000263202 OTOGLQ3ZCN5 2332 aa21.44■■□□□ 1.02
UFD1-201ENST00000263202 NUP214P35658 2090 aaPredicted RBP21.44■■□□□ 1.02
UFD1-201ENST00000263202 SCN2AQ99250 2005 aa21.44■■□□□ 1.02
UFD1-201ENST00000263202 TRBV5-3A0A0A0MS03 114 aa21.43■■□□□ 1.02
UFD1-201ENST00000263202 WASHC1A8K0Z3 465 aa21.43■■□□□ 1.02
UFD1-201ENST00000263202 RDH16O75452 317 aa21.43■■□□□ 1.02
UFD1-201ENST00000263202 NR2F6P10588 404 aa21.43■■□□□ 1.02
UFD1-201ENST00000263202 DDX5P17844 614 aaKnown RBP21.43■■□□□ 1.02
UFD1-201ENST00000263202 BUD31P41223 144 aaPredicted RBP21.43■■□□□ 1.02
UFD1-201ENST00000263202 GCGRP47871 477 aa21.43■■□□□ 1.02
UFD1-201ENST00000263202 ZFP36L1Q07352 338 aaKnown RBP21.43■■□□□ 1.02
UFD1-201ENST00000263202 LRRC74AQ0VAA2 488 aa21.43■■□□□ 1.02
UFD1-201ENST00000263202 PHF19Q5T6S3 580 aa21.43■■□□□ 1.02
UFD1-201ENST00000263202 NANOGP8Q6NSW7 305 aa21.43■■□□□ 1.02
UFD1-201ENST00000263202 NIPAL1Q6NVV3 410 aa21.43■■□□□ 1.02
UFD1-201ENST00000263202 FAM180BQ6P0A1 224 aa21.43■■□□□ 1.02
UFD1-201ENST00000263202 EXOSC8Q96B26 276 aaKnown RBP21.43■■□□□ 1.02
UFD1-201ENST00000263202 PANX1Q96RD7 426 aa21.43■■□□□ 1.02
UFD1-201ENST00000263202 TRIM8Q9BZR9 551 aa21.43■■□□□ 1.02
UFD1-201ENST00000263202 NANOGQ9H9S0 305 aa21.43■■□□□ 1.02
UFD1-201ENST00000263202 ABCD2Q9UBJ2 740 aa21.43■■□□□ 1.02
UFD1-201ENST00000263202 PACSIN3Q9UKS6 424 aa21.43■■□□□ 1.02
UFD1-201ENST00000263202 CES1P1Q9UKY3 287 aa21.43■■□□□ 1.02
UFD1-201ENST00000263202 PCDHB14Q9Y5E9 798 aa21.43■■□□□ 1.02
UFD1-201ENST00000263202 GDF9O60383 454 aa21.43■■□□□ 1.02
UFD1-201ENST00000263202 PDE5AO76074 875 aa21.43■■□□□ 1.02
UFD1-201ENST00000263202 NSA2O95478 260 aaKnown RBP21.43■■□□□ 1.02
UFD1-201ENST00000263202 CPSF4O95639 269 aaKnown RBP21.43■■□□□ 1.02
UFD1-201ENST00000263202 SLC7A2P52569 658 aa21.43■■□□□ 1.02
UFD1-201ENST00000263202 ACY1Q03154 408 aa21.43■■□□□ 1.02
UFD1-201ENST00000263202 FAM214AQ32MH5 1076 aa21.43■■□□□ 1.02
UFD1-201ENST00000263202 GTDC1Q4AE62 458 aa21.43■■□□□ 1.02
UFD1-201ENST00000263202 PIGGQ5H8A4 983 aa21.43■■□□□ 1.02
UFD1-201ENST00000263202 SLC48A1Q6P1K1 146 aa21.43■■□□□ 1.02
UFD1-201ENST00000263202 TLDC1Q6P9B6 456 aa21.43■■□□□ 1.02
UFD1-201ENST00000263202 B3GNT8Q7Z7M8 397 aa21.43■■□□□ 1.02
UFD1-201ENST00000263202 SLC15A3Q8IY34 581 aa21.43■■□□□ 1.02
UFD1-201ENST00000263202 GPR135Q8IZ08 494 aa21.43■■□□□ 1.02
UFD1-201ENST00000263202 SHISA5Q8N114 240 aa21.43■■□□□ 1.02
UFD1-201ENST00000263202 FBXW8Q8N3Y1 598 aa21.43■■□□□ 1.02
UFD1-201ENST00000263202 NATD1Q8N6N6 113 aa21.43■■□□□ 1.02
UFD1-201ENST00000263202 TMEM125Q96AQ2 219 aa21.43■■□□□ 1.02
UFD1-201ENST00000263202 CSF3RQ99062 836 aa21.43■■□□□ 1.02
UFD1-201ENST00000263202 CDC6Q99741 560 aa21.43■■□□□ 1.02
UFD1-201ENST00000263202 CUTCQ9NTM9 273 aa21.43■■□□□ 1.02
UFD1-201ENST00000263202 UTS2RQ9UKP6 389 aa21.43■■□□□ 1.02
UFD1-201ENST00000263202 PDPK1O15530 556 aa21.42■■□□□ 1.02
UFD1-201ENST00000263202 SORBS2O94875 1100 aaKnown RBP21.42■■□□□ 1.02
UFD1-201ENST00000263202 GSNP06396 782 aa21.42■■□□□ 1.02
UFD1-201ENST00000263202 FRKP42685 505 aaPredicted RBP21.42■■□□□ 1.02
UFD1-201ENST00000263202 PCBP4P57723 403 aaKnown RBP21.42■■□□□ 1.02
UFD1-201ENST00000263202 SKP1P63208 163 aa21.42■■□□□ 1.02
UFD1-201ENST00000263202 TRA2AQ13595 282 aaKnown RBP eCLIP21.42■■□□□ 1.02
UFD1-201ENST00000263202 CEACAM7Q14002 265 aa21.42■■□□□ 1.02
UFD1-201ENST00000263202 ANKRD27Q96NW4 1050 aa21.42■■□□□ 1.02
UFD1-201ENST00000263202 SLAMF7Q9NQ25 335 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms