RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 C11orf16Q9NQ32 467 aa21.67■■□□□ 1.06
SMARCB1-201ENST00000263121 SOHLH2Q9NX45 425 aa21.67■■□□□ 1.06
SMARCB1-201ENST00000263121 TAS2R9Q9NYW1 312 aa21.67■■□□□ 1.06
SMARCB1-201ENST00000263121 KCMF1Q9P0J7 381 aa21.67■■□□□ 1.06
SMARCB1-201ENST00000263121 TMEM9Q9P0T7 183 aa21.67■■□□□ 1.06
SMARCB1-201ENST00000263121 KLHL3Q9UH77 587 aa21.67■■□□□ 1.06
SMARCB1-201ENST00000263121 PCDHGB4Q9UN71 923 aa21.67■■□□□ 1.06
SMARCB1-201ENST00000263121 PCDHGA5Q9Y5G8 931 aa21.67■■□□□ 1.06
SMARCB1-201ENST00000263121 SNX13Q9Y5W8 968 aa21.67■■□□□ 1.06
SMARCB1-201ENST00000263121 EME2A4GXA9 379 aaPredicted RBP21.66■■□□□ 1.06
SMARCB1-201ENST00000263121 B3GALT2O43825 422 aa21.66■■□□□ 1.06
SMARCB1-201ENST00000263121 PRKRAO75569 313 aaKnown RBP21.66■■□□□ 1.06
SMARCB1-201ENST00000263121 C1QCP02747 245 aa21.66■■□□□ 1.06
SMARCB1-201ENST00000263121 ENGP17813 658 aa21.66■■□□□ 1.06
SMARCB1-201ENST00000263121 ATP6V1B2P21281 511 aa21.66■■□□□ 1.06
SMARCB1-201ENST00000263121 SQSTM1Q13501 440 aa21.66■■□□□ 1.06
SMARCB1-201ENST00000263121 RUNX2Q13950 521 aa21.66■■□□□ 1.06
SMARCB1-201ENST00000263121 C18orf63Q68DL7 685 aa21.66■■□□□ 1.06
SMARCB1-201ENST00000263121 LCN8Q6JVE9 175 aa21.66■■□□□ 1.06
SMARCB1-201ENST00000263121 FAM180BQ6P0A1 224 aa21.66■■□□□ 1.06
SMARCB1-201ENST00000263121 USP53Q70EK8 1073 aa21.66■■□□□ 1.06
SMARCB1-201ENST00000263121 PDSS2Q86YH6 399 aa21.66■■□□□ 1.06
SMARCB1-201ENST00000263121 C10orf111Q8N326 155 aa21.66■■□□□ 1.06
SMARCB1-201ENST00000263121 ZFP90Q8TF47 636 aa21.66■■□□□ 1.06
SMARCB1-201ENST00000263121 ARRDC1-AS1Q9H2J1 176 aa21.66■■□□□ 1.06
SMARCB1-201ENST00000263121 SMOC1Q9H4F8 434 aa21.66■■□□□ 1.06
SMARCB1-201ENST00000263121 PIF1Q9H611 641 aa21.66■■□□□ 1.06
SMARCB1-201ENST00000263121 PHF11Q9UIL8 331 aa21.66■■□□□ 1.06
SMARCB1-201ENST00000263121 CES1P1Q9UKY3 287 aa21.66■■□□□ 1.06
SMARCB1-201ENST00000263121 ARPC2O15144 300 aa21.66■■□□□ 1.06
SMARCB1-201ENST00000263121 PGRMC2O15173 223 aa21.66■■□□□ 1.06
SMARCB1-201ENST00000263121 GALR3O60755 368 aaPredicted RBP21.66■■□□□ 1.06
SMARCB1-201ENST00000263121 C8BP07358 591 aa21.66■■□□□ 1.06
SMARCB1-201ENST00000263121 ABCB1P08183 1280 aaPredicted RBP21.66■■□□□ 1.06
SMARCB1-201ENST00000263121 GPX2P18283 190 aa21.66■■□□□ 1.06
SMARCB1-201ENST00000263121 PERM1Q5SV97 790 aa21.66■■□□□ 1.06
SMARCB1-201ENST00000263121 SLC48A1Q6P1K1 146 aa21.66■■□□□ 1.06
SMARCB1-201ENST00000263121 PRSS41Q7RTY9 318 aa21.66■■□□□ 1.06
SMARCB1-201ENST00000263121 PRSS42Q7Z5A4 293 aa21.66■■□□□ 1.06
SMARCB1-201ENST00000263121 OR2T12Q8NG77 320 aa21.66■■□□□ 1.06
SMARCB1-201ENST00000263121 PYDC1Q8WXC3 89 aa21.66■■□□□ 1.06
SMARCB1-201ENST00000263121 OR5P2Q8WZ92 322 aa21.66■■□□□ 1.06
SMARCB1-201ENST00000263121 GTPBP2Q9BX10 602 aaKnown RBP21.66■■□□□ 1.06
SMARCB1-201ENST00000263121 ZMYND15Q9H091 742 aa21.66■■□□□ 1.06
SMARCB1-201ENST00000263121 TPT1P8Q9HAU6 139 aa21.66■■□□□ 1.06
SMARCB1-201ENST00000263121 LYRM4Q9HD34 91 aa21.66■■□□□ 1.06
SMARCB1-201ENST00000263121 SLC35C2Q9NQQ7 365 aa21.66■■□□□ 1.06
SMARCB1-201ENST00000263121 ACSS1Q9NUB1 689 aaPredicted RBP21.66■■□□□ 1.06
SMARCB1-201ENST00000263121 UTS2RQ9UKP6 389 aa21.66■■□□□ 1.06
SMARCB1-201ENST00000263121 DAPP1Q9UN19 280 aa21.66■■□□□ 1.06
SMARCB1-201ENST00000263121 EVPLLA8MZ36 301 aa21.65■■□□□ 1.06
SMARCB1-201ENST00000263121 FAM220BPB1ANY3 271 aa21.65■■□□□ 1.06
SMARCB1-201ENST00000263121 CASC3O15234 703 aaKnown RBP21.65■■□□□ 1.06
SMARCB1-201ENST00000263121 STAMBPO95630 424 aa21.65■■□□□ 1.06
SMARCB1-201ENST00000263121 PPIBP23284 216 aaKnown RBP21.65■■□□□ 1.06
SMARCB1-201ENST00000263121 LIM2P55344 173 aa21.65■■□□□ 1.06
SMARCB1-201ENST00000263121 TNFRSF17Q02223 184 aa21.65■■□□□ 1.06
SMARCB1-201ENST00000263121 ABHD18Q0P651 414 aa21.65■■□□□ 1.06
SMARCB1-201ENST00000263121 MLC1Q15049 377 aa21.65■■□□□ 1.06
SMARCB1-201ENST00000263121 ZC3H14Q6PJT7 736 aaKnown RBP21.65■■□□□ 1.06
SMARCB1-201ENST00000263121 CYP2R1Q6VVX0 501 aa21.65■■□□□ 1.06
SMARCB1-201ENST00000263121 ZNF551Q7Z340 670 aaPredicted RBP21.65■■□□□ 1.06
SMARCB1-201ENST00000263121 SPATA24Q86W54 205 aa21.65■■□□□ 1.06
SMARCB1-201ENST00000263121 STX18Q9P2W9 335 aaKnown RBP21.65■■□□□ 1.06
SMARCB1-201ENST00000263121 TTC28Q96AY4 2481 aa21.65■■□□□ 1.06
SMARCB1-201ENST00000263121 TCRBV3S1A0A5B6 114 aa21.64■■□□□ 1.05
SMARCB1-201ENST00000263121 CPED1A4D0V7 1026 aa21.64■■□□□ 1.05
SMARCB1-201ENST00000263121 GLOD5A6NK44 160 aa21.64■■□□□ 1.05
SMARCB1-201ENST00000263121 WASHC1A8K0Z3 465 aa21.64■■□□□ 1.05
SMARCB1-201ENST00000263121 DNAJB6O75190 326 aa21.64■■□□□ 1.05
SMARCB1-201ENST00000263121 NR2F6P10588 404 aa21.64■■□□□ 1.05
SMARCB1-201ENST00000263121 AP2B1P63010 937 aa21.64■■□□□ 1.05
SMARCB1-201ENST00000263121 MRPS22P82650 360 aaKnown RBP21.64■■□□□ 1.05
SMARCB1-201ENST00000263121 PACS2Q86VP3 889 aa21.64■■□□□ 1.05
SMARCB1-201ENST00000263121 TRIML2Q8N7C3 387 aa21.64■■□□□ 1.05
SMARCB1-201ENST00000263121 NAT6Q93015 286 aa21.64■■□□□ 1.05
SMARCB1-201ENST00000263121 FAM120BQ96EK7 910 aaKnown RBP21.64■■□□□ 1.05
SMARCB1-201ENST00000263121 ZBED6CLQ96FA7 236 aaPredicted RBP21.64■■□□□ 1.05
SMARCB1-201ENST00000263121 NUDT22Q9BRQ3 303 aa21.64■■□□□ 1.05
SMARCB1-201ENST00000263121 TRIM15Q9C019 465 aa21.64■■□□□ 1.05
SMARCB1-201ENST00000263121 ENAMQ9NRM1 1142 aa21.64■■□□□ 1.05
SMARCB1-201ENST00000263121 NAALAD2Q9Y3Q0 740 aa21.64■■□□□ 1.05
SMARCB1-201ENST00000263121 R4GN57 208 aa21.64■■□□□ 1.05
SMARCB1-201ENST00000263121 ZNF860A6NHJ4 632 aa21.63■■□□□ 1.05
SMARCB1-201ENST00000263121 H3BNX3 289 aa21.63■■□□□ 1.05
SMARCB1-201ENST00000263121 BUD31P41223 144 aaPredicted RBP21.63■■□□□ 1.05
SMARCB1-201ENST00000263121 HSD11B2P80365 405 aa21.63■■□□□ 1.05
SMARCB1-201ENST00000263121 RHDQ02161 417 aa21.63■■□□□ 1.05
SMARCB1-201ENST00000263121 PROX2Q3B8N5 592 aa21.63■■□□□ 1.05
SMARCB1-201ENST00000263121 SERPINA11Q86U17 422 aa21.63■■□□□ 1.05
SMARCB1-201ENST00000263121 CLEC4FQ8N1N0 589 aa21.63■■□□□ 1.05
SMARCB1-201ENST00000263121 TNIP2Q8NFZ5 429 aa21.63■■□□□ 1.05
SMARCB1-201ENST00000263121 SLC41A2Q96JW4 573 aa21.63■■□□□ 1.05
SMARCB1-201ENST00000263121 C10orf90Q96M02 699 aa21.63■■□□□ 1.05
SMARCB1-201ENST00000263121 LRGUKQ96M69 825 aa21.63■■□□□ 1.05
SMARCB1-201ENST00000263121 NEUROD4Q9HD90 331 aa21.63■■□□□ 1.05
SMARCB1-201ENST00000263121 PRDM9Q9NQV7 894 aa21.63■■□□□ 1.05
SMARCB1-201ENST00000263121 MS4A12Q9NXJ0 267 aa21.63■■□□□ 1.05
SMARCB1-201ENST00000263121 MAGEL2Q9UJ55 1249 aa21.63■■□□□ 1.05
SMARCB1-201ENST00000263121 SCN3AQ9NY46 2000 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms