RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 SNX6Q9UNH7 406 aa12.61□□□□□ -0.39
SGCA-201ENST00000262018 ASF1AQ9Y294 204 aa12.61□□□□□ -0.39
SGCA-201ENST00000262018 COLEC10Q9Y6Z7 277 aa12.61□□□□□ -0.39
SGCA-201ENST00000262018 NPIPB8E9PQR5 432 aa12.6□□□□□ -0.39
SGCA-201ENST00000262018 CLGNO14967 610 aa12.6□□□□□ -0.39
SGCA-201ENST00000262018 ERGP11308 486 aa12.6□□□□□ -0.39
SGCA-201ENST00000262018 RAP1GDS1P52306 607 aa12.6□□□□□ -0.39
SGCA-201ENST00000262018 PNLIPRP1P54315 467 aa12.6□□□□□ -0.39
SGCA-201ENST00000262018 KCNK10P57789 538 aa12.6□□□□□ -0.39
SGCA-201ENST00000262018 IRF8Q02556 426 aa12.6□□□□□ -0.39
SGCA-201ENST00000262018 ZNF33BQ06732 778 aa12.6□□□□□ -0.39
SGCA-201ENST00000262018 STX5Q13190 355 aa12.6□□□□□ -0.39
SGCA-201ENST00000262018 KRT33BQ14525 404 aa12.6□□□□□ -0.39
SGCA-201ENST00000262018 PDCD4Q53EL6 469 aaKnown RBP12.6□□□□□ -0.39
SGCA-201ENST00000262018 DCAF10Q5QP82 559 aa12.6□□□□□ -0.39
SGCA-201ENST00000262018 CAPN13Q6MZZ7 669 aaPredicted RBP12.6□□□□□ -0.39
SGCA-201ENST00000262018 PAOXQ6QHF9 649 aa12.6□□□□□ -0.39
SGCA-201ENST00000262018 FAM198BQ6UWH4 519 aa12.6□□□□□ -0.39
SGCA-201ENST00000262018 KMT5CQ86Y97 462 aa12.6□□□□□ -0.39
SGCA-201ENST00000262018 FUNDC1Q8IVP5 155 aa12.6□□□□□ -0.39
SGCA-201ENST00000262018 FAM13CQ8NE31 585 aa12.6□□□□□ -0.39
SGCA-201ENST00000262018 OR5AR1Q8NGP9 310 aa12.6□□□□□ -0.39
SGCA-201ENST00000262018 OR8K5Q8NH50 307 aa12.6□□□□□ -0.39
SGCA-201ENST00000262018 OR5K2Q8NHB8 316 aa12.6□□□□□ -0.39
SGCA-201ENST00000262018 ZNF501Q96CX3 271 aaPredicted RBP12.6□□□□□ -0.39
SGCA-201ENST00000262018 MVB12BQ9H7P6 319 aa12.6□□□□□ -0.39
SGCA-201ENST00000262018 CIDEBQ9UHD4 219 aa12.6□□□□□ -0.39
SGCA-201ENST00000262018 ZNF490Q9ULM2 529 aaPredicted RBP12.6□□□□□ -0.39
SGCA-201ENST00000262018 CFAP20Q9Y6A4 193 aaKnown RBP12.6□□□□□ -0.39
SGCA-201ENST00000262018 E7ENX8 843 aa12.59□□□□□ -0.39
SGCA-201ENST00000262018 MASP2O00187 686 aa12.59□□□□□ -0.39
SGCA-201ENST00000262018 PEX12O00623 359 aa12.59□□□□□ -0.39
SGCA-201ENST00000262018 JRKO75564 520 aa12.59□□□□□ -0.39
SGCA-201ENST00000262018 CD99P14209 185 aa12.59□□□□□ -0.39
SGCA-201ENST00000262018 DRD2P14416 443 aa12.59□□□□□ -0.39
SGCA-201ENST00000262018 PRPH2P23942 346 aa12.59□□□□□ -0.39
SGCA-201ENST00000262018 HSD17B2P37059 387 aa12.59□□□□□ -0.39
SGCA-201ENST00000262018 HNF4AP41235 474 aa12.59□□□□□ -0.39
SGCA-201ENST00000262018 TSFMP43897 325 aaKnown RBP12.59□□□□□ -0.39
SGCA-201ENST00000262018 DIO3P55073 304 aa12.59□□□□□ -0.39
SGCA-201ENST00000262018 TBPL1P62380 186 aa12.59□□□□□ -0.39
SGCA-201ENST00000262018 HSD11B2P80365 405 aa12.59□□□□□ -0.39
SGCA-201ENST00000262018 TAP2Q03519 686 aa12.59□□□□□ -0.39
SGCA-201ENST00000262018 ARHGAP19Q14CB8 494 aa12.59□□□□□ -0.39
SGCA-201ENST00000262018 NCF4Q15080 339 aa12.59□□□□□ -0.39
SGCA-201ENST00000262018 CPSF6Q16630 551 aaKnown RBP eCLIP12.59□□□□□ -0.39
SGCA-201ENST00000262018 AP5B1Q2VPB7 878 aa12.59□□□□□ -0.39
SGCA-201ENST00000262018 GRHL2Q6ISB3 625 aa12.59□□□□□ -0.39
SGCA-201ENST00000262018 DUS1LQ6P1R4 473 aaKnown RBP12.59□□□□□ -0.39
SGCA-201ENST00000262018 C16orf89Q6UX73 402 aa12.59□□□□□ -0.39
SGCA-201ENST00000262018 MYLK4Q86YV6 388 aaPredicted RBP12.59□□□□□ -0.39
SGCA-201ENST00000262018 SYTL1Q8IYJ3 562 aa12.59□□□□□ -0.39
SGCA-201ENST00000262018 TBC1D21Q8IYX1 336 aa12.59□□□□□ -0.39
SGCA-201ENST00000262018 D2HGDHQ8N465 521 aa12.59□□□□□ -0.39
SGCA-201ENST00000262018 FNDC5Q8NAU1 212 aa12.59□□□□□ -0.39
SGCA-201ENST00000262018 PPFIBP2Q8ND30 876 aa12.59□□□□□ -0.39
SGCA-201ENST00000262018 PHC3Q8NDX5 983 aa12.59□□□□□ -0.39
SGCA-201ENST00000262018 DNAJB14Q8TBM8 379 aa12.59□□□□□ -0.39
SGCA-201ENST00000262018 TSPEARQ8WU66 669 aa12.59□□□□□ -0.39
SGCA-201ENST00000262018 SELENOMQ8WWX9 145 aa12.59□□□□□ -0.39
SGCA-201ENST00000262018 RCN3Q96D15 328 aa12.59□□□□□ -0.39
SGCA-201ENST00000262018 WDR34Q96EX3 536 aa12.59□□□□□ -0.39
SGCA-201ENST00000262018 CCDC120Q96HB5 630 aa12.59□□□□□ -0.39
SGCA-201ENST00000262018 IP6K3Q96PC2 410 aa12.59□□□□□ -0.39
SGCA-201ENST00000262018 THTPAQ9BU02 230 aa12.59□□□□□ -0.39
SGCA-201ENST00000262018 KIR3DX1Q9H7L2 352 aa12.59□□□□□ -0.39
SGCA-201ENST00000262018 EFCAB1Q9HAE3 211 aa12.59□□□□□ -0.39
SGCA-201ENST00000262018 FARSBQ9NSD9 589 aaKnown RBP12.59□□□□□ -0.39
SGCA-201ENST00000262018 ASIC5Q9NY37 505 aa12.59□□□□□ -0.39
SGCA-201ENST00000262018 ZIM2Q9NZV7 527 aa12.59□□□□□ -0.39
SGCA-201ENST00000262018 CCDC167Q9P0B6 97 aa12.59□□□□□ -0.39
SGCA-201ENST00000262018 SPATA7Q9P0W8 599 aa12.59□□□□□ -0.39
SGCA-201ENST00000262018 KCNE2Q9Y6J6 123 aa12.59□□□□□ -0.39
SGCA-201ENST00000262018 A0A088AWK7 358 aa12.58□□□□□ -0.4
SGCA-201ENST00000262018 TRGV8A0A0C4DH27 118 aa12.58□□□□□ -0.4
SGCA-201ENST00000262018 BBIP1A8MTZ0 92 aa12.58□□□□□ -0.4
SGCA-201ENST00000262018 A8MUI8 341 aa12.58□□□□□ -0.4
SGCA-201ENST00000262018 E7EQ34 232 aa12.58□□□□□ -0.4
SGCA-201ENST00000262018 AIM2O14862 343 aa12.58□□□□□ -0.4
SGCA-201ENST00000262018 PDYNP01213 254 aa12.58□□□□□ -0.4
SGCA-201ENST00000262018 NPPBP16860 134 aa12.58□□□□□ -0.4
SGCA-201ENST00000262018 GNAZP19086 355 aa12.58□□□□□ -0.4
SGCA-201ENST00000262018 CD22P20273 847 aa12.58□□□□□ -0.4
SGCA-201ENST00000262018 RORAP35398 523 aa12.58□□□□□ -0.4
SGCA-201ENST00000262018 NUDT2P50583 147 aa12.58□□□□□ -0.4
SGCA-201ENST00000262018 MAD2L1Q13257 205 aaPredicted RBP12.58□□□□□ -0.4
SGCA-201ENST00000262018 DOC2AQ14183 400 aa12.58□□□□□ -0.4
SGCA-201ENST00000262018 RPS6KA2Q15349 733 aa12.58□□□□□ -0.4
SGCA-201ENST00000262018 CYP2A13Q16696 494 aa12.58□□□□□ -0.4
SGCA-201ENST00000262018 XKR6Q5GH73 641 aa12.58□□□□□ -0.4
SGCA-201ENST00000262018 SWT1Q5T5J6 900 aaKnown RBP12.58□□□□□ -0.4
SGCA-201ENST00000262018 PGM2L1Q6PCE3 622 aa12.58□□□□□ -0.4
SGCA-201ENST00000262018 FAM180AQ6UWF9 173 aa12.58□□□□□ -0.4
SGCA-201ENST00000262018 SCUBE1Q8IWY4 988 aa12.58□□□□□ -0.4
SGCA-201ENST00000262018 DEFB107AQ8IZN7 70 aa12.58□□□□□ -0.4
SGCA-201ENST00000262018 OR9I1Q8NGQ6 314 aa12.58□□□□□ -0.4
SGCA-201ENST00000262018 FERD3LQ96RJ6 166 aa12.58□□□□□ -0.4
SGCA-201ENST00000262018 HBEGFQ99075 208 aa12.58□□□□□ -0.4
SGCA-201ENST00000262018 SLX1AQ9BQ83 275 aa12.58□□□□□ -0.4
SGCA-201ENST00000262018 EHD1Q9H4M9 534 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms