RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 RNF111Q6ZNA4 994 aa16.56■□□□□ 0.24
SRSF1-201ENST00000258962 PTRH1Q86Y79 214 aaKnown RBP16.56■□□□□ 0.24
SRSF1-201ENST00000258962 TM4SF18Q96CE8 201 aa16.56■□□□□ 0.24
SRSF1-201ENST00000258962 AURKBQ96GD4 344 aaPredicted RBP16.56■□□□□ 0.24
SRSF1-201ENST00000258962 CCDC115Q96NT0 180 aa16.56■□□□□ 0.24
SRSF1-201ENST00000258962 QRFPRQ96P65 431 aa16.56■□□□□ 0.24
SRSF1-201ENST00000258962 OR2A5Q96R48 311 aa16.56■□□□□ 0.24
SRSF1-201ENST00000258962 PRPF18Q99633 342 aaKnown RBP16.56■□□□□ 0.24
SRSF1-201ENST00000258962 KCTD14Q9BQ13 255 aaPredicted RBP16.56■□□□□ 0.24
SRSF1-201ENST00000258962 C17orf62Q9BQA9 187 aa16.56■□□□□ 0.24
SRSF1-201ENST00000258962 BHLHE41Q9C0J9 482 aaPredicted RBP16.56■□□□□ 0.24
SRSF1-201ENST00000258962 SLC6A16Q9GZN6 736 aa16.56■□□□□ 0.24
SRSF1-201ENST00000258962 CCDC86Q9H6F5 360 aaKnown RBP16.56■□□□□ 0.24
SRSF1-201ENST00000258962 UCK1Q9HA47 277 aa16.56■□□□□ 0.24
SRSF1-201ENST00000258962 EGFL7Q9UHF1 273 aa16.56■□□□□ 0.24
SRSF1-201ENST00000258962 BTNL2Q9UIR0 455 aa16.56■□□□□ 0.24
SRSF1-201ENST00000258962 POMT2Q9UKY4 750 aa16.56■□□□□ 0.24
SRSF1-201ENST00000258962 IGHV1OR21-1A0A087WYE8 117 aa16.55■□□□□ 0.24
SRSF1-201ENST00000258962 TMEM8BA6NDV4 472 aa16.55■□□□□ 0.24
SRSF1-201ENST00000258962 C8BP07358 591 aa16.55■□□□□ 0.24
SRSF1-201ENST00000258962 CD1CP29017 333 aa16.55■□□□□ 0.24
SRSF1-201ENST00000258962 MRPS22P82650 360 aaKnown RBP16.55■□□□□ 0.24
SRSF1-201ENST00000258962 KLC1Q07866 573 aa16.55■□□□□ 0.24
SRSF1-201ENST00000258962 ZFP1Q6P2D0 407 aa16.55■□□□□ 0.24
SRSF1-201ENST00000258962 ABHD17CQ6PCB6 329 aa16.55■□□□□ 0.24
SRSF1-201ENST00000258962 R3HCC1LQ7Z5L2 792 aaKnown RBP16.55■□□□□ 0.24
SRSF1-201ENST00000258962 IFNEQ86WN2 208 aa16.55■□□□□ 0.24
SRSF1-201ENST00000258962 OR2L5Q8NG80 312 aa16.55■□□□□ 0.24
SRSF1-201ENST00000258962 NT5CQ8TCD5 201 aa16.55■□□□□ 0.24
SRSF1-201ENST00000258962 PPCDCQ96CD2 204 aa16.55■□□□□ 0.24
SRSF1-201ENST00000258962 TM4SF19Q96DZ7 209 aa16.55■□□□□ 0.24
SRSF1-201ENST00000258962 MTERF3Q96E29 417 aa16.55■□□□□ 0.24
SRSF1-201ENST00000258962 DPYSL5Q9BPU6 564 aa16.55■□□□□ 0.24
SRSF1-201ENST00000258962 TMEM121BQ9BXQ6 578 aaPredicted RBP16.55■□□□□ 0.24
SRSF1-201ENST00000258962 PRDM7Q9NQW5 492 aa16.55■□□□□ 0.24
SRSF1-201ENST00000258962 SH3BP4Q9P0V3 963 aa16.55■□□□□ 0.24
SRSF1-201ENST00000258962 PRSS51A0A1B0GVH4 220 aa16.55■□□□□ 0.24
SRSF1-201ENST00000258962 ARHGAP10A1A4S6 786 aa16.55■□□□□ 0.24
SRSF1-201ENST00000258962 LILRA5A6NI73 299 aa16.55■□□□□ 0.24
SRSF1-201ENST00000258962 ERI3O43414 337 aaKnown RBP16.55■□□□□ 0.24
SRSF1-201ENST00000258962 DUX1O43812 170 aa16.55■□□□□ 0.24
SRSF1-201ENST00000258962 C1QCP02747 245 aa16.55■□□□□ 0.24
SRSF1-201ENST00000258962 PROS1P07225 676 aa16.55■□□□□ 0.24
SRSF1-201ENST00000258962 HTR1EP28566 365 aa16.55■□□□□ 0.24
SRSF1-201ENST00000258962 RPL3P39023 403 aaKnown RBP16.55■□□□□ 0.24
SRSF1-201ENST00000258962 SSR2P43308 183 aa16.55■□□□□ 0.24
SRSF1-201ENST00000258962 EPHA4P54764 986 aa16.55■□□□□ 0.24
SRSF1-201ENST00000258962 OR4D2P58180 307 aa16.55■□□□□ 0.24
SRSF1-201ENST00000258962 RELAQ04206 551 aa16.55■□□□□ 0.24
SRSF1-201ENST00000258962 SQSTM1Q13501 440 aa16.55■□□□□ 0.24
SRSF1-201ENST00000258962 ANXA8L1Q5VT79 327 aa16.55■□□□□ 0.24
SRSF1-201ENST00000258962 NKAIN2Q5VXU1 208 aa16.55■□□□□ 0.24
SRSF1-201ENST00000258962 LCN8Q6JVE9 175 aa16.55■□□□□ 0.24
SRSF1-201ENST00000258962 CYP2R1Q6VVX0 501 aa16.55■□□□□ 0.24
SRSF1-201ENST00000258962 ASPGQ86U10 573 aa16.55■□□□□ 0.24
SRSF1-201ENST00000258962 SPATA24Q86W54 205 aa16.55■□□□□ 0.24
SRSF1-201ENST00000258962 DHFR2Q86XF0 187 aa16.55■□□□□ 0.24
SRSF1-201ENST00000258962 ZUFSPQ96AP4 578 aa16.55■□□□□ 0.24
SRSF1-201ENST00000258962 ZNF583Q96ND8 569 aa16.55■□□□□ 0.24
SRSF1-201ENST00000258962 GBP5Q96PP8 586 aa16.55■□□□□ 0.24
SRSF1-201ENST00000258962 PANX1Q96RD7 426 aa16.55■□□□□ 0.24
SRSF1-201ENST00000258962 EPB41L1Q9H4G0 881 aa16.55■□□□□ 0.24
SRSF1-201ENST00000258962 PIF1Q9H611 641 aa16.55■□□□□ 0.24
SRSF1-201ENST00000258962 ACTR3BQ9P1U1 418 aa16.55■□□□□ 0.24
SRSF1-201ENST00000258962 WBP11Q9Y2W2 641 aaKnown RBP16.55■□□□□ 0.24
SRSF1-201ENST00000258962 SPEGQ15772 3267 aa16.54■□□□□ 0.24
SRSF1-201ENST00000258962 A0A0J9YVX5 310 aa16.54■□□□□ 0.24
SRSF1-201ENST00000258962 TCRBV3S1A0A5B6 114 aa16.54■□□□□ 0.24
SRSF1-201ENST00000258962 RNASET2O00584 256 aaKnown RBP16.54■□□□□ 0.24
SRSF1-201ENST00000258962 ARPC2O15144 300 aa16.54■□□□□ 0.24
SRSF1-201ENST00000258962 P2RX6O15547 441 aa16.54■□□□□ 0.24
SRSF1-201ENST00000258962 UBXN7O94888 489 aa16.54■□□□□ 0.24
SRSF1-201ENST00000258962 ANP32DO95626 131 aa16.54■□□□□ 0.24
SRSF1-201ENST00000258962 CPSF4O95639 269 aaKnown RBP16.54■□□□□ 0.24
SRSF1-201ENST00000258962 ARFIP1P53367 373 aa16.54■□□□□ 0.24
SRSF1-201ENST00000258962 SNRPNP63162 240 aaKnown RBP16.54■□□□□ 0.24
SRSF1-201ENST00000258962 RTP5Q14D33 572 aa16.54■□□□□ 0.24
SRSF1-201ENST00000258962 PHF19Q5T6S3 580 aa16.54■□□□□ 0.24
SRSF1-201ENST00000258962 GPR155Q7Z3F1 870 aa16.54■□□□□ 0.24
SRSF1-201ENST00000258962 B3GNT8Q7Z7M8 397 aa16.54■□□□□ 0.24
SRSF1-201ENST00000258962 TICAM1Q8IUC6 712 aa16.54■□□□□ 0.24
SRSF1-201ENST00000258962 C10orf111Q8N326 155 aa16.54■□□□□ 0.24
SRSF1-201ENST00000258962 KCT2Q8NC54 265 aa16.54■□□□□ 0.24
SRSF1-201ENST00000258962 WDR36Q8NI36 951 aaKnown RBP16.54■□□□□ 0.24
SRSF1-201ENST00000258962 NRG4Q8WWG1 115 aa16.54■□□□□ 0.24
SRSF1-201ENST00000258962 CIDECQ96AQ7 238 aaPredicted RBP16.54■□□□□ 0.24
SRSF1-201ENST00000258962 THUMPD3Q9BV44 507 aaKnown RBP16.54■□□□□ 0.24
SRSF1-201ENST00000258962 VCX3BQ9H321 246 aa16.54■□□□□ 0.24
SRSF1-201ENST00000258962 KAT8Q9H7Z6 458 aaKnown RBP16.54■□□□□ 0.24
SRSF1-201ENST00000258962 POLR1BQ9H9Y6 1135 aa16.54■□□□□ 0.24
SRSF1-201ENST00000258962 ATAD3AQ9NVI7 634 aa16.54■□□□□ 0.24
SRSF1-201ENST00000258962 TEX10Q9NXF1 929 aaPredicted RBP16.54■□□□□ 0.24
SRSF1-201ENST00000258962 SNX13Q9Y5W8 968 aa16.54■□□□□ 0.24
SRSF1-201ENST00000258962 CCDC187A0A096LP49 1063 aa16.53■□□□□ 0.24
SRSF1-201ENST00000258962 TBX19O60806 448 aa16.53■□□□□ 0.24
SRSF1-201ENST00000258962 DDCP20711 480 aa16.53■□□□□ 0.24
SRSF1-201ENST00000258962 ATP5A1P25705 553 aaKnown RBP16.53■□□□□ 0.24
SRSF1-201ENST00000258962 CCKBRP32239 447 aa16.53■□□□□ 0.24
SRSF1-201ENST00000258962 VHLP40337 213 aa16.53■□□□□ 0.24
SRSF1-201ENST00000258962 GSTM5P46439 218 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms