RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 TBC1D19Q8N5T2 526 aa17.55■□□□□ 0.4
HOXC11-201ENST00000243082 OR13H1Q8NG92 308 aa17.55■□□□□ 0.4
HOXC11-201ENST00000243082 ADAMTS16Q8TE57 1224 aa17.55■□□□□ 0.4
HOXC11-201ENST00000243082 NCSTNQ92542 709 aa17.55■□□□□ 0.4
HOXC11-201ENST00000243082 MSANTD3Q96H12 275 aa17.55■□□□□ 0.4
HOXC11-201ENST00000243082 TWSG1Q9GZX9 223 aa17.55■□□□□ 0.4
HOXC11-201ENST00000243082 SRMSQ9H3Y6 488 aa17.55■□□□□ 0.4
HOXC11-201ENST00000243082 NEUROD4Q9HD90 331 aa17.55■□□□□ 0.4
HOXC11-201ENST00000243082 ACSS1Q9NUB1 689 aaPredicted RBP17.55■□□□□ 0.4
HOXC11-201ENST00000243082 WASHC1A8K0Z3 465 aa17.55■□□□□ 0.4
HOXC11-201ENST00000243082 IGLV3-19P01714 112 aa17.55■□□□□ 0.4
HOXC11-201ENST00000243082 HIST1H1TP22492 207 aaPredicted RBP17.55■□□□□ 0.4
HOXC11-201ENST00000243082 ELK4P28324 431 aa17.55■□□□□ 0.4
HOXC11-201ENST00000243082 CDK9P50750 372 aaKnown RBP17.55■□□□□ 0.4
HOXC11-201ENST00000243082 DAPP51397 102 aa17.55■□□□□ 0.4
HOXC11-201ENST00000243082 ARHGDIAP52565 204 aa17.55■□□□□ 0.4
HOXC11-201ENST00000243082 DSTNP60981 165 aa17.55■□□□□ 0.4
HOXC11-201ENST00000243082 HSPB3Q12988 150 aa17.55■□□□□ 0.4
HOXC11-201ENST00000243082 SLAMF1Q13291 335 aa17.55■□□□□ 0.4
HOXC11-201ENST00000243082 RFX4Q33E94 735 aa17.55■□□□□ 0.4
HOXC11-201ENST00000243082 TOR1AIP1Q5JTV8 583 aa17.55■□□□□ 0.4
HOXC11-201ENST00000243082 MRM1Q6IN84 353 aaKnown RBP17.55■□□□□ 0.4
HOXC11-201ENST00000243082 THAP5Q7Z6K1 395 aa17.55■□□□□ 0.4
HOXC11-201ENST00000243082 ABI3BPQ7Z7G0 1075 aa17.55■□□□□ 0.4
HOXC11-201ENST00000243082 SLC22A18ASQ8N1D0 253 aa17.55■□□□□ 0.4
HOXC11-201ENST00000243082 ZNF555Q8NEP9 628 aa17.55■□□□□ 0.4
HOXC11-201ENST00000243082 OR2L5Q8NG80 312 aa17.55■□□□□ 0.4
HOXC11-201ENST00000243082 OR8K5Q8NH50 307 aa17.55■□□□□ 0.4
HOXC11-201ENST00000243082 PSMA8Q8TAA3 256 aa17.55■□□□□ 0.4
HOXC11-201ENST00000243082 FLVCR1-AS1Q8TAF5 88 aa17.55■□□□□ 0.4
HOXC11-201ENST00000243082 TMIGD2Q96BF3 282 aa17.55■□□□□ 0.4
HOXC11-201ENST00000243082 NRBF2Q96F24 287 aa17.55■□□□□ 0.4
HOXC11-201ENST00000243082 ZBED6CLQ96FA7 236 aaPredicted RBP17.55■□□□□ 0.4
HOXC11-201ENST00000243082 KCNC2Q96PR1 638 aa17.55■□□□□ 0.4
HOXC11-201ENST00000243082 APOBEC3BQ9UH17 382 aaKnown RBP17.55■□□□□ 0.4
HOXC11-201ENST00000243082 ASB4Q9Y574 426 aa17.55■□□□□ 0.4
HOXC11-201ENST00000243082 TNRC18O15417 2968 aaPredicted RBP17.54■□□□□ 0.4
HOXC11-201ENST00000243082 MITFO75030 526 aaPredicted RBP17.54■□□□□ 0.4
HOXC11-201ENST00000243082 ATP5A1P25705 553 aaKnown RBP17.54■□□□□ 0.4
HOXC11-201ENST00000243082 GSTT1P30711 240 aa17.54■□□□□ 0.4
HOXC11-201ENST00000243082 POLR2IP36954 125 aaKnown RBP17.54■□□□□ 0.4
HOXC11-201ENST00000243082 ARFIP1P53367 373 aa17.54■□□□□ 0.4
HOXC11-201ENST00000243082 SMAD4Q13485 552 aaKnown RBP17.54■□□□□ 0.4
HOXC11-201ENST00000243082 SLC9A5Q14940 896 aa17.54■□□□□ 0.4
HOXC11-201ENST00000243082 MLC1Q15049 377 aa17.54■□□□□ 0.4
HOXC11-201ENST00000243082 KDM4DQ6B0I6 523 aa17.54■□□□□ 0.4
HOXC11-201ENST00000243082 BORAQ6PGQ7 559 aa17.54■□□□□ 0.4
HOXC11-201ENST00000243082 C8orf59Q8N0T1 100 aaPredicted RBP17.54■□□□□ 0.4
HOXC11-201ENST00000243082 HORMAD2Q8N7B1 307 aa17.54■□□□□ 0.4
HOXC11-201ENST00000243082 ACOT4Q8N9L9 421 aa17.54■□□□□ 0.4
HOXC11-201ENST00000243082 POLMQ9NP87 494 aaPredicted RBP17.54■□□□□ 0.4
HOXC11-201ENST00000243082 EHD3Q9NZN3 535 aa17.54■□□□□ 0.4
HOXC11-201ENST00000243082 SAMHD1Q9Y3Z3 626 aaKnown RBP17.54■□□□□ 0.4
HOXC11-201ENST00000243082 PCDHGA8Q9Y5G5 932 aa17.54■□□□□ 0.4
HOXC11-201ENST00000243082 LOC100130705A0A1B0GUX0 176 aa17.54■□□□□ 0.4
HOXC11-201ENST00000243082 PRAMEF26H0Y7S4 382 aa17.54■□□□□ 0.4
HOXC11-201ENST00000243082 SLC16A6O15403 523 aa17.54■□□□□ 0.4
HOXC11-201ENST00000243082 PRKRAO75569 313 aaKnown RBP17.54■□□□□ 0.4
HOXC11-201ENST00000243082 TNFRSF1BP20333 461 aa17.54■□□□□ 0.4
HOXC11-201ENST00000243082 YAP1P46937 504 aaKnown RBP17.54■□□□□ 0.4
HOXC11-201ENST00000243082 RAD23AP54725 363 aa17.54■□□□□ 0.4
HOXC11-201ENST00000243082 RPS26P62854 115 aaKnown RBP17.54■□□□□ 0.4
HOXC11-201ENST00000243082 PRRT3Q5FWE3 981 aa17.54■□□□□ 0.4
HOXC11-201ENST00000243082 CEACAM20Q6UY09 585 aa17.54■□□□□ 0.4
HOXC11-201ENST00000243082 C6orf120Q7Z4R8 191 aa17.54■□□□□ 0.4
HOXC11-201ENST00000243082 SPPL2AQ8TCT8 520 aa17.54■□□□□ 0.4
HOXC11-201ENST00000243082 PHF7Q9BWX1 381 aaPredicted RBP17.54■□□□□ 0.4
HOXC11-201ENST00000243082 PRO3102Q9H379 93 aa17.54■□□□□ 0.4
HOXC11-201ENST00000243082 REEP1Q9H902 201 aa17.54■□□□□ 0.4
HOXC11-201ENST00000243082 NDUFAF4Q9P032 175 aa17.54■□□□□ 0.4
HOXC11-201ENST00000243082 PDP1Q9P0J1 537 aaPredicted RBP17.54■□□□□ 0.4
HOXC11-201ENST00000243082 CYP8B1Q9UNU6 501 aa17.54■□□□□ 0.4
HOXC11-201ENST00000243082 ATG4BQ9Y4P1 393 aa17.54■□□□□ 0.4
HOXC11-201ENST00000243082 MDC1Q14676 2089 aaKnown RBP17.53■□□□□ 0.4
HOXC11-201ENST00000243082 GOLGA4Q13439 2230 aaKnown RBP17.53■□□□□ 0.4
HOXC11-201ENST00000243082 A0A1W2PR48 441 aa17.53■□□□□ 0.4
HOXC11-201ENST00000243082 PRAMEF25A6NGN4 478 aa17.53■□□□□ 0.4
HOXC11-201ENST00000243082 MAN2B1O00754 1011 aa17.53■□□□□ 0.4
HOXC11-201ENST00000243082 TOR1BO14657 336 aa17.53■□□□□ 0.4
HOXC11-201ENST00000243082 IGFBP5P24593 272 aa17.53■□□□□ 0.4
HOXC11-201ENST00000243082 RABIFP47224 123 aa17.53■□□□□ 0.4
HOXC11-201ENST00000243082 CCR5P51681 352 aa17.53■□□□□ 0.4
HOXC11-201ENST00000243082 KIAA0895LQ68EN5 471 aa17.53■□□□□ 0.4
HOXC11-201ENST00000243082 CHRDL2Q6WN34 429 aa17.53■□□□□ 0.4
HOXC11-201ENST00000243082 FRMD1Q8N878 549 aa17.53■□□□□ 0.4
HOXC11-201ENST00000243082 SLC22A18Q96BI1 424 aa17.53■□□□□ 0.4
HOXC11-201ENST00000243082 TOE1Q96GM8 510 aaKnown RBP17.53■□□□□ 0.4
HOXC11-201ENST00000243082 FCRL4Q96PJ5 515 aa17.53■□□□□ 0.4
HOXC11-201ENST00000243082 FAIM2Q9BWQ8 316 aa17.53■□□□□ 0.4
HOXC11-201ENST00000243082 GLIPR2Q9H4G4 154 aa17.53■□□□□ 0.4
HOXC11-201ENST00000243082 SLC35C2Q9NQQ7 365 aa17.53■□□□□ 0.4
HOXC11-201ENST00000243082 C2orf42Q9NWW7 574 aa17.53■□□□□ 0.4
HOXC11-201ENST00000243082 THUMPD1Q9NXG2 353 aaKnown RBP17.53■□□□□ 0.4
HOXC11-201ENST00000243082 THEGQ9P2T0 379 aa17.53■□□□□ 0.4
HOXC11-201ENST00000243082 ANGPT4Q9Y264 503 aa17.53■□□□□ 0.4
HOXC11-201ENST00000243082 ORC6Q9Y5N6 252 aa17.53■□□□□ 0.4
HOXC11-201ENST00000243082 CEPT1Q9Y6K0 416 aa17.53■□□□□ 0.4
HOXC11-201ENST00000243082 TRIOO75962 3097 aa17.53■□□□□ 0.4
HOXC11-201ENST00000243082 LRP4O75096 1905 aa17.53■□□□□ 0.4
HOXC11-201ENST00000243082 DNAH14Q0VDD8 3507 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms