RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 AQP9O43315 295 aa12.54□□□□□ -0.4
SLIRP-201ENST00000238688 HNRNPRO43390 633 aaKnown RBP12.54□□□□□ -0.4
SLIRP-201ENST00000238688 EML2O95834 649 aa12.54□□□□□ -0.4
SLIRP-201ENST00000238688 MT-CO3P00414 261 aa12.54□□□□□ -0.4
SLIRP-201ENST00000238688 KLK1P06870 262 aa12.54□□□□□ -0.4
SLIRP-201ENST00000238688 CELA2BP08218 269 aaPredicted RBP12.54□□□□□ -0.4
SLIRP-201ENST00000238688 UGT2B7P16662 529 aa12.54□□□□□ -0.4
SLIRP-201ENST00000238688 TPP2P29144 1249 aaPredicted RBP12.54□□□□□ -0.4
SLIRP-201ENST00000238688 BCL6P41182 706 aa12.54□□□□□ -0.4
SLIRP-201ENST00000238688 WNT3P56703 355 aa12.54□□□□□ -0.4
SLIRP-201ENST00000238688 PHC1P78364 1004 aa12.54□□□□□ -0.4
SLIRP-201ENST00000238688 E2F1Q01094 437 aa12.54□□□□□ -0.4
SLIRP-201ENST00000238688 MEF2AQ02078 507 aaPredicted RBP12.54□□□□□ -0.4
SLIRP-201ENST00000238688 VAC14Q08AM6 782 aa12.54□□□□□ -0.4
SLIRP-201ENST00000238688 ELOAQ14241 798 aaKnown RBP12.54□□□□□ -0.4
SLIRP-201ENST00000238688 CAPRIN1Q14444 709 aaKnown RBP12.54□□□□□ -0.4
SLIRP-201ENST00000238688 FAM219BQ5XKK7 198 aa12.54□□□□□ -0.4
SLIRP-201ENST00000238688 OR4C11Q6IEV9 310 aa12.54□□□□□ -0.4
SLIRP-201ENST00000238688 OGFOD3Q6PK18 319 aa12.54□□□□□ -0.4
SLIRP-201ENST00000238688 CALHM3Q86XJ0 350 aa12.54□□□□□ -0.4
SLIRP-201ENST00000238688 CLHC1Q8NHS4 586 aa12.54□□□□□ -0.4
SLIRP-201ENST00000238688 FLVCR1-AS1Q8TAF5 88 aa12.54□□□□□ -0.4
SLIRP-201ENST00000238688 CRELD1Q96HD1 420 aa12.54□□□□□ -0.4
SLIRP-201ENST00000238688 EGLN2Q96KS0 407 aa12.54□□□□□ -0.4
SLIRP-201ENST00000238688 OR2A14Q96R47 310 aa12.54□□□□□ -0.4
SLIRP-201ENST00000238688 CD180Q99467 661 aa12.54□□□□□ -0.4
SLIRP-201ENST00000238688 THUMPD3Q9BV44 507 aaKnown RBP12.54□□□□□ -0.4
SLIRP-201ENST00000238688 NLNQ9BYT8 704 aa12.54□□□□□ -0.4
SLIRP-201ENST00000238688 CCM2LQ9NUG4 571 aaPredicted RBP12.54□□□□□ -0.4
SLIRP-201ENST00000238688 THUMPD1Q9NXG2 353 aaKnown RBP12.54□□□□□ -0.4
SLIRP-201ENST00000238688 NKX1-2Q9UD57 310 aaPredicted RBP12.54□□□□□ -0.4
SLIRP-201ENST00000238688 CNOT11Q9UKZ1 510 aaKnown RBP12.54□□□□□ -0.4
SLIRP-201ENST00000238688 DOLKQ9UPQ8 538 aa12.54□□□□□ -0.4
SLIRP-201ENST00000238688 CLCA2Q9UQC9 943 aa12.54□□□□□ -0.4
SLIRP-201ENST00000238688 ZNF451Q9Y4E5 1061 aa12.54□□□□□ -0.4
SLIRP-201ENST00000238688 AP4S1Q9Y587 144 aa12.54□□□□□ -0.4
SLIRP-201ENST00000238688 PCDHB14Q9Y5E9 798 aa12.54□□□□□ -0.4
SLIRP-201ENST00000238688 A0A0A6YYD5 115 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 DHRS12A0PJE2 317 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 ELOVL7A1L3X0 281 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 BTN3A3O00478 584 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 NVLO15381 856 aaKnown RBP12.53□□□□□ -0.4
SLIRP-201ENST00000238688 KRT75O95678 551 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 TBX6O95947 436 aaPredicted RBP12.53□□□□□ -0.4
SLIRP-201ENST00000238688 GP1BAP07359 652 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 ANXA6P08133 673 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 GGT1P19440 569 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 HIST1H1TP22492 207 aaPredicted RBP12.53□□□□□ -0.4
SLIRP-201ENST00000238688 FRKP42685 505 aaPredicted RBP12.53□□□□□ -0.4
SLIRP-201ENST00000238688 SSR2P43308 183 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 POLE2P56282 527 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 TAS2R50P59544 299 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 C2orf80Q0P641 193 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 C1orf61Q13536 156 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 VEZF1Q14119 521 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 SLC9A5Q14940 896 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 HKDC1Q2TB90 917 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 DEFB133Q30KQ1 61 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 RABL3Q5HYI8 236 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 WLSQ5T9L3 541 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 KIAA1614Q5VZ46 1190 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 OR4F3Q6IEY1 312 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 ZCCHC8Q6NZY4 707 aaKnown RBP12.53□□□□□ -0.4
SLIRP-201ENST00000238688 ABHD17CQ6PCB6 329 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 RNF44Q7L0R7 432 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 ASPGQ86U10 573 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 C2orf73Q8N5S3 287 aaPredicted RBP12.53□□□□□ -0.4
SLIRP-201ENST00000238688 FAM47BQ8NA70 645 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 PAPD5Q8NDF8 572 aaKnown RBP12.53□□□□□ -0.4
SLIRP-201ENST00000238688 FAM46DQ8NEK8 389 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 ADCY4Q8NFM4 1077 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 OR7A2PQ8NGA2 310 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 ZFP28Q8NHY6 868 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 PSMA8Q8TAA3 256 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 LMX1AQ8TE12 382 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 PYDC1Q8WXC3 89 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 NXPE2Q96DL1 559 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 MS4A6EQ96DS6 147 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 TM4SF19Q96DZ7 209 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 FAM120BQ96EK7 910 aaKnown RBP12.53□□□□□ -0.4
SLIRP-201ENST00000238688 ZBED6CLQ96FA7 236 aaPredicted RBP12.53□□□□□ -0.4
SLIRP-201ENST00000238688 NSMCE2Q96MF7 247 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 RNF145Q96MT1 663 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 ZNF583Q96ND8 569 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 ZFYVE21Q9BQ24 234 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 DUSP23Q9BVJ7 150 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 CLK4Q9HAZ1 481 aaKnown RBP12.53□□□□□ -0.4
SLIRP-201ENST00000238688 OLAHQ9NV23 265 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 MS4A12Q9NXJ0 267 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 SPHK1Q9NYA1 384 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 TAS2R9Q9NYW1 312 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 SLC25A37Q9NYZ2 338 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 EPHA6Q9UF33 1036 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 PHF11Q9UIL8 331 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 POMT2Q9UKY4 750 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 C15orf41Q9Y2V0 281 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 LRRC42Q9Y546 428 aa12.53□□□□□ -0.4
SLIRP-201ENST00000238688 LOC400499M0QZD8 3231 aa12.52□□□□□ -0.4
SLIRP-201ENST00000238688 A0A1W2PNU3 283 aaPredicted RBP12.52□□□□□ -0.41
SLIRP-201ENST00000238688 C1orf226A1L170 272 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms