RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 FANCGO15287 622 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 RDH16O75452 317 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 SLC10A6Q3KNW5 377 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 BCL2L15Q5TBC7 163 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 MAP1SQ66K74 1059 aaPredicted RBP7.91□□□□□ -1.14
APOB-201ENST00000233242 TMEM135Q86UB9 458 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 LPPQ93052 612 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 FCRL3Q96P31 734 aaPredicted RBP7.91□□□□□ -1.14
APOB-201ENST00000233242 TSPAN15O95858 294 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 VIPP01282 170 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 ZNF30P17039 623 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 MC2RQ01718 297 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 PPP1R8Q12972 351 aaKnown RBP7.91□□□□□ -1.14
APOB-201ENST00000233242 TARBP2Q15633 366 aaKnown RBP7.91□□□□□ -1.14
APOB-201ENST00000233242 KRBOX4Q5JUW0 171 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 AVL9Q8NBF6 648 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 ELMOD3Q96FG2 381 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 KLHL9Q9P2J3 617 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 STBD1O95210 358 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 ALPPL2P10696 532 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 CHRNB1P11230 501 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 RPL10P27635 214 aaKnown RBP7.91□□□□□ -1.14
APOB-201ENST00000233242 KDELR2P33947 212 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 EVI2BP34910 448 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 CHRNA4P43681 627 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 SLC35F1Q5T1Q4 408 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 NOXRED1Q6NXP6 359 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 CLEC20AQ6ZU45 233 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 PTERQ96BW5 349 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 CCDC120Q96HB5 630 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 ZNF416Q9BWM5 594 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 ACSL6Q9UKU0 697 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 CACNG2Q9Y698 323 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 LOC730098B7Z3J9 87 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 C6orf47O95873 294 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 UCHL1P09936 223 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 RPL35P42766 123 aaKnown RBP7.91□□□□□ -1.14
APOB-201ENST00000233242 FXYD6P3P58550 94 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 TREX2Q9BQ50 279 aaPredicted RBP7.91□□□□□ -1.14
APOB-201ENST00000233242 NELFAQ9H3P2 528 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 C9IYK1 514 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 RPP14O95059 124 aaKnown RBP7.91□□□□□ -1.14
APOB-201ENST00000233242 CSF1P09603 554 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 HSD11B1P28845 292 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 GJA9P57773 515 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 POM121L1PQ3SYA9 428 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 CHRFAM7AQ494W8 412 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 CNIH2Q6PI25 160 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 THOC6Q86W42 341 aaKnown RBP7.91□□□□□ -1.14
APOB-201ENST00000233242 FOXRED2Q8IWF2 684 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 TMEM145Q8NBT3 493 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 DPF3Q92784 378 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 NSUN3Q9H649 340 aaKnown RBP7.91□□□□□ -1.14
APOB-201ENST00000233242 NLE1Q9NVX2 485 aaPredicted RBP7.91□□□□□ -1.14
APOB-201ENST00000233242 KLK1P06870 262 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 CDK10Q15131 360 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.91□□□□□ -1.142e-31■□□□□ 9.4
APOB-201ENST00000233242 METTL2BQ6P1Q9 378 aaKnown RBP7.91□□□□□ -1.14
APOB-201ENST00000233242 C3P1Q6ZMU1 363 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 SLC16A9Q7RTY1 509 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 C12orf40Q86WS4 652 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 L3HYPDHQ96EM0 354 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 SDK1Q7Z5N4 2213 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 PSMD9O00233 223 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 UBBP0CG47 229 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 UBCP0CG48 685 aaKnown RBP7.91□□□□□ -1.14
APOB-201ENST00000233242 OXTRP30559 389 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 RPS27AP62979 156 aaKnown RBP7.91□□□□□ -1.14
APOB-201ENST00000233242 UBA52P62987 128 aaKnown RBP7.91□□□□□ -1.14
APOB-201ENST00000233242 NKX6-1P78426 367 aaPredicted RBP7.91□□□□□ -1.14
APOB-201ENST00000233242 GRM2Q14416 872 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 GPR19Q15760 415 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 SSX2Q16385 188 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 NOL9Q5SY16 702 aaKnown RBP7.91□□□□□ -1.14
APOB-201ENST00000233242 GTF2IRD2BQ6EKJ0 949 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 TXNRD3NBQ6F5E7 133 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 ALG1LQ6GMV1 187 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 KCTD18Q6PI47 426 aaPredicted RBP7.91□□□□□ -1.14
APOB-201ENST00000233242 GTF2IRD2Q86UP8 949 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 ZNF366Q8N895 744 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 C3orf58Q8NDZ4 430 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 NDNFQ8TB73 568 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 OR10A4Q9H209 315 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 NIPAL4Q0D2K0 466 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 TBCEQ15813 527 aaPredicted RBP7.91□□□□□ -1.14
APOB-201ENST00000233242 VARS2Q5ST30 1063 aaKnown RBP7.91□□□□□ -1.14
APOB-201ENST00000233242 MPP7Q5T2T1 576 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 C16orf58Q96GQ5 468 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 MIR1-1HGQ9H1L0 117 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 C19orf12Q9NSK7 152 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 UTS2RQ9UKP6 389 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 KIDINS220Q9ULH0 1771 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 OIP5O43482 229 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 AP1G1O43747 822 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 ZNF821O75541 412 aaPredicted RBP7.91□□□□□ -1.14
APOB-201ENST00000233242 CDK5R2Q13319 367 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 ARHGAP11AQ6P4F7 1023 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 SLC24A5Q71RS6 500 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 OR13C4Q8NGS5 318 aa7.91□□□□□ -1.14
APOB-201ENST00000233242 ZFP90Q8TF47 636 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms