RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 RBCK1Q9BYM8 510 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 SLC27A6Q9Y2P4 619 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 GRXCR2A6NFK2 248 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 C1QTNF3-AMACRE9PGA6 284 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 CAPNS1P04632 268 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 FAM163BP0C2L3 166 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 RHCEP18577 417 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 ALAS2P22557 587 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 CFL1P23528 166 aaKnown RBP13.28□□□□□ -0.28
HCFC2-201ENST00000229330 CDK10Q15131 360 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 SPATC1Q76KD6 591 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 POGLUT1Q8NBL1 392 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 OR4K1Q8NGD4 311 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 ARNTL2Q8WYA1 636 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 GAL3ST3Q96A11 431 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.28□□□□□ -0.28
HCFC2-201ENST00000229330 SMOC2Q9H3U7 446 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 NEUROD4Q9HD90 331 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 MRPS23Q9Y3D9 190 aaKnown RBP13.28□□□□□ -0.28
HCFC2-201ENST00000229330 MEN1O00255 615 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 ACOT8O14734 319 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 GATBO75879 557 aaKnown RBP13.28□□□□□ -0.28
HCFC2-201ENST00000229330 RGS9O75916 674 aaPredicted RBP13.28□□□□□ -0.28
HCFC2-201ENST00000229330 PDYNP01213 254 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 GIMD1P0DJR0 217 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 DDX6P26196 483 aaKnown RBP eCLIP13.28□□□□□ -0.28
HCFC2-201ENST00000229330 EIF2DP41214 584 aaKnown RBP13.28□□□□□ -0.28
HCFC2-201ENST00000229330 TAS2R50P59544 299 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 BTN3A2P78410 334 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 GID4Q8IVV7 300 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 SECISBP2Q96T21 854 aaKnown RBP13.28□□□□□ -0.28
HCFC2-201ENST00000229330 MARCH4Q9P2E8 410 aaPredicted RBP13.28□□□□□ -0.28
HCFC2-201ENST00000229330 TBC1D3BA6NDS4 549 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 TMEM221A6NGB7 291 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 CDK1P06493 297 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 DBIP07108 87 aaKnown RBP13.28□□□□□ -0.28
HCFC2-201ENST00000229330 AGTR1P30556 359 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 CLDN8P56748 225 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 LRRC37A5PQ49AS3 106 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 SLC22A10Q63ZE4 541 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 BEND7Q8N7W2 519 aaPredicted RBP13.28□□□□□ -0.28
HCFC2-201ENST00000229330 OR2L2Q8NH16 312 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 LRR1Q96L50 414 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 CD180Q99467 661 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 GNG8Q9UK08 70 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 CA12O43570 354 aa13.27□□□□□ -0.28
HCFC2-201ENST00000229330 RPP14O95059 124 aaKnown RBP13.27□□□□□ -0.28
HCFC2-201ENST00000229330 POP4O95707 220 aaKnown RBP13.27□□□□□ -0.28
HCFC2-201ENST00000229330 ALPLP05186 524 aa13.27□□□□□ -0.28
HCFC2-201ENST00000229330 KCTD9Q7L273 389 aa13.27□□□□□ -0.28
HCFC2-201ENST00000229330 ZSCAN1Q8NBB4 408 aa13.27□□□□□ -0.28
HCFC2-201ENST00000229330 OR52B6Q8NGF0 335 aa13.27□□□□□ -0.28
HCFC2-201ENST00000229330 CD300LFQ8TDQ1 290 aa13.27□□□□□ -0.28
HCFC2-201ENST00000229330 IMP4Q96G21 291 aaKnown RBP13.27□□□□□ -0.28
HCFC2-201ENST00000229330 SCGB3A2Q96PL1 93 aa13.27□□□□□ -0.28
HCFC2-201ENST00000229330 TM9SF2Q99805 663 aa13.27□□□□□ -0.28
HCFC2-201ENST00000229330 PCBD2Q9H0N5 130 aa13.27□□□□□ -0.28
HCFC2-201ENST00000229330 DCAF13Q9NV06 445 aaKnown RBP13.27□□□□□ -0.28
HCFC2-201ENST00000229330 CACNG4Q9UBN1 327 aa13.27□□□□□ -0.28
HCFC2-201ENST00000229330 PCDHGB2Q9Y5G2 931 aa13.27□□□□□ -0.28
HCFC2-201ENST00000229330 NUP188Q5SRE5 1749 aa13.27□□□□□ -0.28
HCFC2-201ENST00000229330 CNR2P34972 360 aa13.27□□□□□ -0.28
HCFC2-201ENST00000229330 RGS6P49758 472 aa13.27□□□□□ -0.28
HCFC2-201ENST00000229330 S100A10P60903 97 aa13.27□□□□□ -0.28
HCFC2-201ENST00000229330 TRAM2Q15035 370 aa13.27□□□□□ -0.28
HCFC2-201ENST00000229330 OXA1LQ15070 435 aa13.27□□□□□ -0.28
HCFC2-201ENST00000229330 REM2Q8IYK8 340 aaPredicted RBP13.27□□□□□ -0.28
HCFC2-201ENST00000229330 COX18Q8N8Q8 333 aa13.27□□□□□ -0.28
HCFC2-201ENST00000229330 ZFP41Q8N8Y5 198 aa13.27□□□□□ -0.28
HCFC2-201ENST00000229330 PLD4Q96BZ4 506 aa13.27□□□□□ -0.28
HCFC2-201ENST00000229330 ELMOD3Q96FG2 381 aa13.27□□□□□ -0.28
HCFC2-201ENST00000229330 MKKSQ9NPJ1 570 aaPredicted RBP13.27□□□□□ -0.28
HCFC2-201ENST00000229330 SH2B3Q9UQQ2 575 aa13.27□□□□□ -0.28
HCFC2-201ENST00000229330 RBBP9O75884 186 aa13.27□□□□□ -0.29
HCFC2-201ENST00000229330 FCER2P06734 321 aa13.27□□□□□ -0.29
HCFC2-201ENST00000229330 PGAM2P15259 253 aa13.27□□□□□ -0.29
HCFC2-201ENST00000229330 GABRR2P28476 465 aa13.27□□□□□ -0.29
HCFC2-201ENST00000229330 RCAN2Q14206 197 aa13.27□□□□□ -0.29
HCFC2-201ENST00000229330 TATDN3Q17R31 274 aa13.27□□□□□ -0.29
HCFC2-201ENST00000229330 MSANTD1Q6ZTZ1 278 aa13.27□□□□□ -0.29
HCFC2-201ENST00000229330 REEP4Q9H6H4 257 aa13.27□□□□□ -0.29
HCFC2-201ENST00000229330 GORASP2Q9H8Y8 452 aa13.27□□□□□ -0.29
HCFC2-201ENST00000229330 MPIP34949 423 aa13.27□□□□□ -0.29
HCFC2-201ENST00000229330 RPS13P62277 151 aaKnown RBP13.27□□□□□ -0.29
HCFC2-201ENST00000229330 CRHR2Q13324 411 aa13.27□□□□□ -0.29
HCFC2-201ENST00000229330 SERINC3Q13530 473 aa13.27□□□□□ -0.29
HCFC2-201ENST00000229330 FAM214AQ32MH5 1076 aa13.27□□□□□ -0.29
HCFC2-201ENST00000229330 FAM46CQ5VWP2 391 aa13.27□□□□□ -0.29
HCFC2-201ENST00000229330 GALNT10Q86SR1 603 aa13.27□□□□□ -0.29
HCFC2-201ENST00000229330 OSTM1Q86WC4 334 aa13.27□□□□□ -0.29
HCFC2-201ENST00000229330 SLAIN1Q8ND83 568 aa13.27□□□□□ -0.29
HCFC2-201ENST00000229330 FAM83FQ8NEG4 500 aaPredicted RBP13.27□□□□□ -0.29
HCFC2-201ENST00000229330 SLC22A17Q8WUG5 538 aa13.27□□□□□ -0.29
HCFC2-201ENST00000229330 RPL3LQ92901 407 aaKnown RBP13.27□□□□□ -0.29
HCFC2-201ENST00000229330 OR10A4Q9H209 315 aa13.27□□□□□ -0.29
HCFC2-201ENST00000229330 PCTPQ9UKL6 214 aa13.27□□□□□ -0.29
HCFC2-201ENST00000229330 CXCL14O95715 111 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 PAK4O96013 591 aaPredicted RBP13.26□□□□□ -0.29
HCFC2-201ENST00000229330 SSTR4P31391 388 aa13.26□□□□□ -0.29
HCFC2-201ENST00000229330 COL28A1Q2UY09 1125 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms