RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 TXNRD3NBQ6F5E7 133 aa12.74□□□□□ -0.37
COL1A1-201ENST00000225964 Q6ZVL8 140 aa12.74□□□□□ -0.37
COL1A1-201ENST00000225964 AQP12AQ8IXF9 295 aa12.74□□□□□ -0.37
COL1A1-201ENST00000225964 GPR137CQ8N3F9 429 aa12.74□□□□□ -0.37
COL1A1-201ENST00000225964 DAZLQ92904 295 aaKnown RBP12.74□□□□□ -0.37
COL1A1-201ENST00000225964 TAMM41Q96BW9 452 aa12.74□□□□□ -0.37
COL1A1-201ENST00000225964 NSUN3Q9H649 340 aaKnown RBP12.74□□□□□ -0.37
COL1A1-201ENST00000225964 SLC15A1P46059 708 aa12.74□□□□□ -0.37
COL1A1-201ENST00000225964 RBM39Q14498 530 aaKnown RBP12.74□□□□□ -0.37
COL1A1-201ENST00000225964 IQCKQ8N0W5 287 aa12.74□□□□□ -0.37
COL1A1-201ENST00000225964 LMO7Q8WWI1 1683 aa12.74□□□□□ -0.37
COL1A1-201ENST00000225964 UNC119BA6NIH7 251 aa12.74□□□□□ -0.37
COL1A1-201ENST00000225964 OR6C70A6NIJ9 312 aa12.74□□□□□ -0.37
COL1A1-201ENST00000225964 FAM159BA6NKW6 160 aa12.74□□□□□ -0.37
COL1A1-201ENST00000225964 H6PDO95479 791 aa12.74□□□□□ -0.37
COL1A1-201ENST00000225964 TUBG1P23258 451 aa12.74□□□□□ -0.37
COL1A1-201ENST00000225964 STC1P52823 247 aa12.74□□□□□ -0.37
COL1A1-201ENST00000225964 CSNK1A1LQ8N752 337 aa12.74□□□□□ -0.37
COL1A1-201ENST00000225964 LRRC20Q8TCA0 184 aa12.74□□□□□ -0.37
COL1A1-201ENST00000225964 ASB15Q8WXK1 588 aa12.74□□□□□ -0.37
COL1A1-201ENST00000225964 OTUB2Q96DC9 234 aa12.74□□□□□ -0.37
COL1A1-201ENST00000225964 RARRES3Q9UL19 164 aa12.74□□□□□ -0.37
COL1A1-201ENST00000225964 DHDHQ9UQ10 334 aa12.74□□□□□ -0.37
COL1A1-201ENST00000225964 SLC22A1O15245 554 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 BRINP1O60477 761 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 DLX3O60479 287 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 GSRP00390 522 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 EPCAMP16422 314 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 ATF4P18848 351 aaPredicted RBP12.73□□□□□ -0.37
COL1A1-201ENST00000225964 MLLT6P55198 1093 aaPredicted RBP12.73□□□□□ -0.37
COL1A1-201ENST00000225964 PLGLAQ15195 96 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 KIAA0895LQ68EN5 471 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 GRHL2Q6ISB3 625 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 UBE2Q1Q7Z7E8 422 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 ASB9Q96DX5 294 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 C1orf21Q9H246 121 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 FETUBQ9UGM5 382 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 SUSD2Q9UGT4 822 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 IFT172Q9UG01 1749 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 GGT3PA6NGU5 568 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 SOCS2O14508 198 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 ATE1O95260 518 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 CNOT4O95628 575 aaKnown RBP12.73□□□□□ -0.37
COL1A1-201ENST00000225964 CD9P21926 228 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 GRPRP30550 384 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 SLC25A11Q02978 314 aaKnown RBP12.73□□□□□ -0.37
COL1A1-201ENST00000225964 UPP1Q16831 310 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 SPANXN4Q5MJ08 99 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 ZC3H14Q6PJT7 736 aaKnown RBP12.73□□□□□ -0.37
COL1A1-201ENST00000225964 BBS10Q8TAM1 723 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 CPT1CQ8TCG5 803 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 CANT1Q8WVQ1 401 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 C10orf82Q8WW14 230 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 WACQ9BTA9 647 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 C8orf33Q9H7E9 229 aaPredicted RBP12.73□□□□□ -0.37
COL1A1-201ENST00000225964 IFNGR1P15260 489 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 SLC9A3P48764 834 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 PSMA6P60900 246 aaKnown RBP12.73□□□□□ -0.37
COL1A1-201ENST00000225964 TGFBIQ15582 683 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 ALDH16A1Q8IZ83 802 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 ZBTB8BQ8NAP8 495 aaPredicted RBP12.73□□□□□ -0.37
COL1A1-201ENST00000225964 A6NL46 340 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 SOCS5O75159 536 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 FAM163BP0C2L3 166 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 MAGEA11P43364 429 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 RPS15AP62244 130 aaKnown RBP12.73□□□□□ -0.37
COL1A1-201ENST00000225964 LAPTM4AQ15012 233 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 CYP1B1Q16678 543 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 ZNF852Q6ZMS4 543 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 LTN1O94822 1766 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 ZNF821O75541 412 aaPredicted RBP12.73□□□□□ -0.37
COL1A1-201ENST00000225964 CD3GP09693 182 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 HOXB9P17482 250 aaPredicted RBP12.73□□□□□ -0.37
COL1A1-201ENST00000225964 RPL26P61254 145 aaKnown RBP12.73□□□□□ -0.37
COL1A1-201ENST00000225964 CDCA2Q69YH5 1023 aaPredicted RBP12.73□□□□□ -0.37
COL1A1-201ENST00000225964 REEP3Q6NUK4 255 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 C2CD4AQ8NCU7 369 aaPredicted RBP12.73□□□□□ -0.37
COL1A1-201ENST00000225964 KLHL15Q96M94 604 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 CREBZFQ9NS37 354 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 ICKQ9UPZ9 632 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 DPPA5A6NC42 116 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 SFTPBP07988 381 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 CREB1P16220 341 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 GRIA2P42262 883 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 DPP6P42658 865 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 GALNT2Q10471 571 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 GAS6Q14393 721 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 LIPJQ5W064 366 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 GLT8D1Q68CQ7 371 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 FCAMRQ8WWV6 532 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 GLYATL1Q969I3 302 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 HSPA12BQ96MM6 686 aa12.73□□□□□ -0.37
COL1A1-201ENST00000225964 OR5K4A6NMS3 321 aa12.72□□□□□ -0.37
COL1A1-201ENST00000225964 TCEANCQ8N8B7 351 aa12.72□□□□□ -0.37
COL1A1-201ENST00000225964 STOML3Q8TAV4 291 aa12.72□□□□□ -0.37
COL1A1-201ENST00000225964 DCSTAMPQ9H295 470 aa12.72□□□□□ -0.37
COL1A1-201ENST00000225964 MTMR10Q9NXD2 777 aa12.72□□□□□ -0.37
COL1A1-201ENST00000225964 EXOSC1Q9Y3B2 195 aaKnown RBP12.72□□□□□ -0.37
COL1A1-201ENST00000225964 C2orf78A6NCI8 922 aa12.72□□□□□ -0.37
COL1A1-201ENST00000225964 ADORA3P0DMS8 318 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms