RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 FDXRP22570 491 aa14.04□□□□□ -0.16
PTPRA-201ENST00000216877 AKAP5P24588 427 aa14.04□□□□□ -0.16
PTPRA-201ENST00000216877 AGFG1P52594 562 aaKnown RBP14.04□□□□□ -0.16
PTPRA-201ENST00000216877 GTF2H2Q13888 395 aa14.04□□□□□ -0.16
PTPRA-201ENST00000216877 GTF2H2CQ6P1K8 395 aa14.04□□□□□ -0.16
PTPRA-201ENST00000216877 WDR48Q8TAF3 677 aa14.04□□□□□ -0.16
PTPRA-201ENST00000216877 SHARPINQ9H0F6 387 aa14.04□□□□□ -0.16
PTPRA-201ENST00000216877 HEXA-AS1Q9H8Q6 139 aa14.04□□□□□ -0.16
PTPRA-201ENST00000216877 BPIFA1Q9NP55 256 aa14.04□□□□□ -0.16
PTPRA-201ENST00000216877 KCTD5Q9NXV2 234 aa14.04□□□□□ -0.16
PTPRA-201ENST00000216877 TVP23BQ9NYZ1 205 aa14.04□□□□□ -0.16
PTPRA-201ENST00000216877 GLS2Q9UI32 602 aa14.04□□□□□ -0.16
PTPRA-201ENST00000216877 FBXW11Q9UKB1 542 aa14.04□□□□□ -0.16
PTPRA-201ENST00000216877 TNFSF13BQ9Y275 285 aa14.04□□□□□ -0.16
PTPRA-201ENST00000216877 RAI2Q9Y5P3 530 aa14.04□□□□□ -0.16
PTPRA-201ENST00000216877 GLYATL1P3A0A0U1RQE8 302 aa14.04□□□□□ -0.16
PTPRA-201ENST00000216877 MROH6A6NGR9 719 aa14.04□□□□□ -0.16
PTPRA-201ENST00000216877 J3KTA2 159 aa14.04□□□□□ -0.16
PTPRA-201ENST00000216877 RPS17P08708 135 aaKnown RBP14.04□□□□□ -0.16
PTPRA-201ENST00000216877 PRR35P0CG20 571 aa14.04□□□□□ -0.16
PTPRA-201ENST00000216877 OGNP20774 298 aaKnown RBP14.04□□□□□ -0.16
PTPRA-201ENST00000216877 CRATP43155 626 aa14.04□□□□□ -0.16
PTPRA-201ENST00000216877 CRYBB2P43320 205 aa14.04□□□□□ -0.16
PTPRA-201ENST00000216877 CCR6P51684 374 aa14.04□□□□□ -0.16
PTPRA-201ENST00000216877 FGL1Q08830 312 aa14.04□□□□□ -0.16
PTPRA-201ENST00000216877 PAQR7Q86WK9 346 aa14.04□□□□□ -0.16
PTPRA-201ENST00000216877 MARCH9Q86YJ5 346 aa14.04□□□□□ -0.16
PTPRA-201ENST00000216877 DENND6BQ8NEG7 585 aa14.04□□□□□ -0.16
PTPRA-201ENST00000216877 MND1Q9BWT6 205 aa14.04□□□□□ -0.16
PTPRA-201ENST00000216877 CACNG6Q9BXT2 260 aa14.04□□□□□ -0.16
PTPRA-201ENST00000216877 BCL2L14Q9BZR8 327 aa14.04□□□□□ -0.16
PTPRA-201ENST00000216877 PITHD1Q9GZP4 211 aaPredicted RBP14.04□□□□□ -0.16
PTPRA-201ENST00000216877 ADARB2Q9NS39 739 aaKnown RBP14.04□□□□□ -0.16
PTPRA-201ENST00000216877 IQCMA0A1B0GVH7 501 aa14.04□□□□□ -0.16
PTPRA-201ENST00000216877 SLC28A1O00337 649 aa14.04□□□□□ -0.16
PTPRA-201ENST00000216877 INSRRP14616 1297 aa14.04□□□□□ -0.16
PTPRA-201ENST00000216877 ARF4P18085 180 aaPredicted RBP14.04□□□□□ -0.16
PTPRA-201ENST00000216877 PVALBP20472 110 aaPredicted RBP14.04□□□□□ -0.16
PTPRA-201ENST00000216877 PPP3R1P63098 170 aa14.04□□□□□ -0.16
PTPRA-201ENST00000216877 SUSD1Q6UWL2 747 aa14.04□□□□□ -0.16
PTPRA-201ENST00000216877 ADGRF3Q8IZF5 1079 aa14.04□□□□□ -0.16
PTPRA-201ENST00000216877 PGBD3Q8N328 593 aa14.04□□□□□ -0.16
PTPRA-201ENST00000216877 CELF5Q8N6W0 485 aaKnown RBP14.04□□□□□ -0.16
PTPRA-201ENST00000216877 SIGLEC11Q96RL6 698 aa14.04□□□□□ -0.16
PTPRA-201ENST00000216877 TMEM43Q9BTV4 400 aa14.04□□□□□ -0.16
PTPRA-201ENST00000216877 MRM3Q9HC36 420 aaKnown RBP14.04□□□□□ -0.16
PTPRA-201ENST00000216877 HEBP1Q9NRV9 189 aa14.04□□□□□ -0.16
PTPRA-201ENST00000216877 PLEKHB1Q9UF11 243 aaPredicted RBP14.04□□□□□ -0.16
PTPRA-201ENST00000216877 SRRDQ9UH36 339 aa14.04□□□□□ -0.16
PTPRA-201ENST00000216877 CDH10Q9Y6N8 788 aa14.04□□□□□ -0.16
PTPRA-201ENST00000216877 C4BPBP20851 252 aa14.03□□□□□ -0.16
PTPRA-201ENST00000216877 UBA1P22314 1058 aaKnown RBP14.03□□□□□ -0.16
PTPRA-201ENST00000216877 RPS14P62263 151 aaKnown RBP14.03□□□□□ -0.16
PTPRA-201ENST00000216877 RPS25P62851 125 aaKnown RBP14.03□□□□□ -0.16
PTPRA-201ENST00000216877 PLD1Q13393 1074 aa14.03□□□□□ -0.16
PTPRA-201ENST00000216877 TMEM132BQ14DG7 1078 aa14.03□□□□□ -0.16
PTPRA-201ENST00000216877 MARC1Q5VT66 337 aa14.03□□□□□ -0.16
PTPRA-201ENST00000216877 ZCCHC12Q6PEW1 402 aa14.03□□□□□ -0.16
PTPRA-201ENST00000216877 HSDL2Q6YN16 418 aa14.03□□□□□ -0.16
PTPRA-201ENST00000216877 GOLGA7Q7Z5G4 137 aa14.03□□□□□ -0.16
PTPRA-201ENST00000216877 RGL4Q8IZJ4 473 aa14.03□□□□□ -0.16
PTPRA-201ENST00000216877 ZNF527Q8NB42 609 aa14.03□□□□□ -0.16
PTPRA-201ENST00000216877 DNAJB8Q8NHS0 232 aa14.03□□□□□ -0.16
PTPRA-201ENST00000216877 TM9SF4Q92544 642 aa14.03□□□□□ -0.16
PTPRA-201ENST00000216877 UCN3Q969E3 161 aa14.03□□□□□ -0.16
PTPRA-201ENST00000216877 PITX2Q99697 317 aa14.03□□□□□ -0.16
PTPRA-201ENST00000216877 SYT17Q9BSW7 474 aa14.03□□□□□ -0.16
PTPRA-201ENST00000216877 GSDMCQ9BYG8 508 aa14.03□□□□□ -0.16
PTPRA-201ENST00000216877 DPAGT1Q9H3H5 408 aa14.03□□□□□ -0.16
PTPRA-201ENST00000216877 NSUN3Q9H649 340 aaKnown RBP14.03□□□□□ -0.16
PTPRA-201ENST00000216877 F9P00740 461 aa14.03□□□□□ -0.16
PTPRA-201ENST00000216877 IGFBP1P08833 259 aaPredicted RBP14.03□□□□□ -0.16
PTPRA-201ENST00000216877 CD3GP09693 182 aa14.03□□□□□ -0.16
PTPRA-201ENST00000216877 NR2F6P10588 404 aa14.03□□□□□ -0.16
PTPRA-201ENST00000216877 BCKDHAP12694 445 aa14.03□□□□□ -0.16
PTPRA-201ENST00000216877 HOXB3P14651 431 aaPredicted RBP14.03□□□□□ -0.16
PTPRA-201ENST00000216877 PRAMEF19Q5SWL8 479 aa14.03□□□□□ -0.16
PTPRA-201ENST00000216877 CXorf57Q6NSI4 855 aaKnown RBP14.03□□□□□ -0.16
PTPRA-201ENST00000216877 DNAJB7Q7Z6W7 309 aaPredicted RBP14.03□□□□□ -0.16
PTPRA-201ENST00000216877 KATNB1Q9BVA0 655 aa14.03□□□□□ -0.16
PTPRA-201ENST00000216877 ARHGAP39Q9C0H5 1083 aa14.03□□□□□ -0.16
PTPRA-201ENST00000216877 KLHL1Q9NR64 748 aa14.03□□□□□ -0.16
PTPRA-201ENST00000216877 FNIP2Q9P278 1114 aa14.03□□□□□ -0.16
PTPRA-201ENST00000216877 LRFN2Q9ULH4 789 aa14.03□□□□□ -0.16
PTPRA-201ENST00000216877 POFUT2Q9Y2G5 429 aa14.03□□□□□ -0.16
PTPRA-201ENST00000216877 ANXA8P13928 327 aa14.03□□□□□ -0.16
PTPRA-201ENST00000216877 CDKN1CP49918 316 aaPredicted RBP14.03□□□□□ -0.16
PTPRA-201ENST00000216877 OC90Q02509 493 aaPredicted RBP14.03□□□□□ -0.16
PTPRA-201ENST00000216877 BAMBIQ13145 260 aa14.03□□□□□ -0.16
PTPRA-201ENST00000216877 KYAT1Q16773 422 aa14.03□□□□□ -0.16
PTPRA-201ENST00000216877 ATP13A5Q4VNC0 1218 aa14.03□□□□□ -0.16
PTPRA-201ENST00000216877 TRPV1Q8NER1 839 aa14.03□□□□□ -0.16
PTPRA-201ENST00000216877 HMGB4Q8WW32 186 aa14.03□□□□□ -0.16
PTPRA-201ENST00000216877 SELENOMQ8WWX9 145 aa14.03□□□□□ -0.16
PTPRA-201ENST00000216877 RFT1Q96AA3 541 aa14.03□□□□□ -0.16
PTPRA-201ENST00000216877 CREB3L1Q96BA8 519 aa14.03□□□□□ -0.16
PTPRA-201ENST00000216877 SERPINB11Q96P15 392 aa14.03□□□□□ -0.16
PTPRA-201ENST00000216877 AARSD1Q9BTE6 412 aaKnown RBP14.03□□□□□ -0.16
PTPRA-201ENST00000216877 ARL6Q9H0F7 186 aa14.03□□□□□ -0.16
PTPRA-201ENST00000216877 LINC00597Q9H2U6 94 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms