RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 SLC16A6O15403 523 aa28.2■■■□□ 2.11
PABPN1-201ENST00000216727 DIRAS1O95057 198 aa28.2■■■□□ 2.11
PABPN1-201ENST00000216727 IFNA14P01570 189 aa28.2■■■□□ 2.11
PABPN1-201ENST00000216727 HIST1H1TP22492 207 aaPredicted RBP28.2■■■□□ 2.11
PABPN1-201ENST00000216727 PIGAP37287 484 aa28.2■■■□□ 2.11
PABPN1-201ENST00000216727 SMAD4Q13485 552 aaKnown RBP28.2■■■□□ 2.11
PABPN1-201ENST00000216727 ABI3BPQ7Z7G0 1075 aa28.2■■■□□ 2.11
PABPN1-201ENST00000216727 LZICQ8WZA0 190 aa28.2■■■□□ 2.11
PABPN1-201ENST00000216727 TAMM41Q96BW9 452 aa28.2■■■□□ 2.11
PABPN1-201ENST00000216727 SRMSQ9H3Y6 488 aa28.2■■■□□ 2.11
PABPN1-201ENST00000216727 POLMQ9NP87 494 aaPredicted RBP28.2■■■□□ 2.11
PABPN1-201ENST00000216727 SIRT3Q9NTG7 399 aaPredicted RBP28.2■■■□□ 2.11
PABPN1-201ENST00000216727 C5AR2Q9P296 337 aa28.2■■■□□ 2.11
PABPN1-201ENST00000216727 ANGPT4Q9Y264 503 aa28.2■■■□□ 2.11
PABPN1-201ENST00000216727 SAMHD1Q9Y3Z3 626 aaKnown RBP28.2■■■□□ 2.11
PABPN1-201ENST00000216727 ERI3O43414 337 aaKnown RBP28.19■■■□□ 2.1
PABPN1-201ENST00000216727 MBTPS2O43462 519 aa28.19■■■□□ 2.1
PABPN1-201ENST00000216727 GSTT1P30711 240 aa28.19■■■□□ 2.1
PABPN1-201ENST00000216727 RABIFP47224 123 aa28.19■■■□□ 2.1
PABPN1-201ENST00000216727 CCR5P51681 352 aa28.19■■■□□ 2.1
PABPN1-201ENST00000216727 MRM1Q6IN84 353 aaKnown RBP28.19■■■□□ 2.1
PABPN1-201ENST00000216727 PAQR7Q86WK9 346 aa28.19■■■□□ 2.1
PABPN1-201ENST00000216727 NRROSQ86YC3 692 aa28.19■■■□□ 2.1
PABPN1-201ENST00000216727 ING2Q9H160 280 aa28.19■■■□□ 2.1
PABPN1-201ENST00000216727 PRAMEF26H0Y7S4 382 aa28.19■■■□□ 2.1
PABPN1-201ENST00000216727 M0QX08 132 aa28.19■■■□□ 2.1
PABPN1-201ENST00000216727 BTN3A3O00478 584 aa28.19■■■□□ 2.1
PABPN1-201ENST00000216727 IGHV4-34P06331 123 aa28.19■■■□□ 2.1
PABPN1-201ENST00000216727 ITGAMP11215 1152 aa28.19■■■□□ 2.1
PABPN1-201ENST00000216727 IGFBP5P24593 272 aa28.19■■■□□ 2.1
PABPN1-201ENST00000216727 TCEA2Q15560 299 aa28.19■■■□□ 2.1
PABPN1-201ENST00000216727 KDM4DQ6B0I6 523 aa28.19■■■□□ 2.1
PABPN1-201ENST00000216727 CYP4Z1Q86W10 505 aa28.19■■■□□ 2.1
PABPN1-201ENST00000216727 ZC3H7AQ8IWR0 971 aaKnown RBP28.19■■■□□ 2.1
PABPN1-201ENST00000216727 EPYCQ99645 322 aa28.19■■■□□ 2.1
PABPN1-201ENST00000216727 BARD1Q99728 777 aaKnown RBP28.19■■■□□ 2.1
PABPN1-201ENST00000216727 LOC100130705A0A1B0GUX0 176 aa28.18■■■□□ 2.1
PABPN1-201ENST00000216727 C4orf51C9J302 202 aa28.18■■■□□ 2.1
PABPN1-201ENST00000216727 GUCY1B2O75343 617 aa28.18■■■□□ 2.1
PABPN1-201ENST00000216727 IL18R1Q13478 541 aa28.18■■■□□ 2.1
PABPN1-201ENST00000216727 KIR2DS3Q14952 304 aa28.18■■■□□ 2.1
PABPN1-201ENST00000216727 C6orf106Q9H6K1 298 aaPredicted RBP28.18■■■□□ 2.1
PABPN1-201ENST00000216727 DDX18Q9NVP1 670 aaKnown RBP28.18■■■□□ 2.1
PABPN1-201ENST00000216727 ASB4Q9Y574 426 aa28.18■■■□□ 2.1
PABPN1-201ENST00000216727 COMMD3-BMI1R4GMX3 469 aa28.18■■■□□ 2.1
PABPN1-201ENST00000216727 ATP5A1P25705 553 aaKnown RBP28.18■■■□□ 2.1
PABPN1-201ENST00000216727 HLCSP50747 726 aa28.18■■■□□ 2.1
PABPN1-201ENST00000216727 DGKEP52429 567 aa28.18■■■□□ 2.1
PABPN1-201ENST00000216727 HSPB3Q12988 150 aa28.18■■■□□ 2.1
PABPN1-201ENST00000216727 SLAMF1Q13291 335 aa28.18■■■□□ 2.1
PABPN1-201ENST00000216727 IFI44LQ53G44 452 aa28.18■■■□□ 2.1
PABPN1-201ENST00000216727 TOR1AIP1Q5JTV8 583 aa28.18■■■□□ 2.1
PABPN1-201ENST00000216727 CEACAM20Q6UY09 585 aa28.18■■■□□ 2.1
PABPN1-201ENST00000216727 ACOT4Q8N9L9 421 aa28.18■■■□□ 2.1
PABPN1-201ENST00000216727 PIK3C3Q8NEB9 887 aa28.18■■■□□ 2.1
PABPN1-201ENST00000216727 ZFPM2Q8WW38 1151 aa28.18■■■□□ 2.1
PABPN1-201ENST00000216727 MACROD1Q9BQ69 325 aa28.18■■■□□ 2.1
PABPN1-201ENST00000216727 A4GALTQ9NPC4 353 aa28.18■■■□□ 2.1
PABPN1-201ENST00000216727 SLC2A4RGQ9NR83 387 aa28.18■■■□□ 2.1
PABPN1-201ENST00000216727 C9P02748 559 aa28.17■■■□□ 2.1
PABPN1-201ENST00000216727 FESP07332 822 aa28.17■■■□□ 2.1
PABPN1-201ENST00000216727 DAPP51397 102 aa28.17■■■□□ 2.1
PABPN1-201ENST00000216727 RPS15AP62244 130 aaKnown RBP28.17■■■□□ 2.1
PABPN1-201ENST00000216727 ILF3Q12906 894 aaKnown RBP eCLIP28.17■■■□□ 2.1
PABPN1-201ENST00000216727 TSEN54Q7Z6J9 526 aaKnown RBP28.17■■■□□ 2.1
PABPN1-201ENST00000216727 SPPL2AQ8TCT8 520 aa28.17■■■□□ 2.1
PABPN1-201ENST00000216727 PHF7Q9BWX1 381 aaPredicted RBP28.17■■■□□ 2.1
PABPN1-201ENST00000216727 SYNPO2LQ9H987 977 aa28.17■■■□□ 2.1
PABPN1-201ENST00000216727 SLC35C2Q9NQQ7 365 aa28.17■■■□□ 2.1
PABPN1-201ENST00000216727 THUMPD1Q9NXG2 353 aaKnown RBP28.17■■■□□ 2.1
PABPN1-201ENST00000216727 NDUFAF4Q9P032 175 aa28.17■■■□□ 2.1
PABPN1-201ENST00000216727 PDP1Q9P0J1 537 aaPredicted RBP28.17■■■□□ 2.1
PABPN1-201ENST00000216727 NDRG2Q9UN36 371 aaKnown RBP28.17■■■□□ 2.1
PABPN1-201ENST00000216727 KLHL20Q9Y2M5 609 aa28.17■■■□□ 2.1
PABPN1-201ENST00000216727 PCDHGB3Q9Y5G1 929 aa28.17■■■□□ 2.1
PABPN1-201ENST00000216727 PCDHGA8Q9Y5G5 932 aa28.17■■■□□ 2.1
PABPN1-201ENST00000216727 LRP4O75096 1905 aa28.17■■■□□ 2.1
PABPN1-201ENST00000216727 MAN2B1O00754 1011 aa28.16■■■□□ 2.1
PABPN1-201ENST00000216727 KIF1CO43896 1103 aaKnown RBP28.16■■■□□ 2.1
PABPN1-201ENST00000216727 OPN1SWP03999 348 aa28.16■■■□□ 2.1
PABPN1-201ENST00000216727 STXBP1P61764 594 aaKnown RBP28.16■■■□□ 2.1
PABPN1-201ENST00000216727 KIAA0895LQ68EN5 471 aa28.16■■■□□ 2.1
PABPN1-201ENST00000216727 REEP3Q6NUK4 255 aa28.16■■■□□ 2.1
PABPN1-201ENST00000216727 C6orf120Q7Z4R8 191 aa28.16■■■□□ 2.1
PABPN1-201ENST00000216727 FLCNQ8NFG4 579 aa28.16■■■□□ 2.1
PABPN1-201ENST00000216727 OR13H1Q8NG92 308 aa28.16■■■□□ 2.1
PABPN1-201ENST00000216727 OR8K5Q8NH50 307 aa28.16■■■□□ 2.1
PABPN1-201ENST00000216727 FLVCR1-AS1Q8TAF5 88 aa28.16■■■□□ 2.1
PABPN1-201ENST00000216727 ZNF347Q96SE7 839 aa28.16■■■□□ 2.1
PABPN1-201ENST00000216727 THSD1Q9NS62 852 aa28.16■■■□□ 2.1
PABPN1-201ENST00000216727 ZSCAN32Q9NX65 697 aa28.16■■■□□ 2.1
PABPN1-201ENST00000216727 THEGQ9P2T0 379 aa28.16■■■□□ 2.1
PABPN1-201ENST00000216727 STATHP02808 62 aa28.16■■■□□ 2.1
PABPN1-201ENST00000216727 CDK9P50750 372 aaKnown RBP28.16■■■□□ 2.1
PABPN1-201ENST00000216727 TJAP1Q5JTD0 557 aa28.16■■■□□ 2.1
PABPN1-201ENST00000216727 RBM48Q5RL73 367 aaKnown RBP28.16■■■□□ 2.1
PABPN1-201ENST00000216727 Q6ZS52 159 aa28.16■■■□□ 2.1
PABPN1-201ENST00000216727 UCN3Q969E3 161 aa28.16■■■□□ 2.1
PABPN1-201ENST00000216727 RUBCNLQ9H714 662 aa28.16■■■□□ 2.1
PABPN1-201ENST00000216727 JRKO75564 520 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms