RNA–Protein interactions for RNA: ENST00000215794.7

USP18-201, Transcript of ubiquitin specific peptidase 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP18, Length 2,129 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP18-201ENST00000215794 BCKDKO14874 412 aa17.25■□□□□ 0.35
USP18-201ENST00000215794 TMPRSS11DO60235 418 aa17.25■□□□□ 0.35
USP18-201ENST00000215794 SEMA3DO95025 777 aa17.25■□□□□ 0.35
USP18-201ENST00000215794 SERPIND1P05546 499 aa17.25■□□□□ 0.35
USP18-201ENST00000215794 HOXB3P14651 431 aaPredicted RBP17.25■□□□□ 0.35
USP18-201ENST00000215794 CXCR2P25025 360 aa17.25■□□□□ 0.35
USP18-201ENST00000215794 RAD23AP54725 363 aa17.25■□□□□ 0.35
USP18-201ENST00000215794 RAPSNQ13702 412 aa17.25■□□□□ 0.35
USP18-201ENST00000215794 SIM2Q14190 667 aaPredicted RBP17.25■□□□□ 0.35
USP18-201ENST00000215794 TEAD4Q15561 434 aa17.25■□□□□ 0.35
USP18-201ENST00000215794 C6orf141Q5SZD1 244 aa17.25■□□□□ 0.35
USP18-201ENST00000215794 KDM4DQ6B0I6 523 aa17.25■□□□□ 0.35
USP18-201ENST00000215794 ZNF773Q6PK81 442 aa17.25■□□□□ 0.35
USP18-201ENST00000215794 PIWIL3Q7Z3Z3 882 aaKnown RBP17.25■□□□□ 0.35
USP18-201ENST00000215794 UBE3DQ7Z6J8 389 aa17.25■□□□□ 0.35
USP18-201ENST00000215794 PIK3C3Q8NEB9 887 aa17.25■□□□□ 0.35
USP18-201ENST00000215794 TAMM41Q96BW9 452 aa17.25■□□□□ 0.35
USP18-201ENST00000215794 ISOC1Q96CN7 298 aa17.25■□□□□ 0.35
USP18-201ENST00000215794 TIMM29Q9BSF4 260 aa17.25■□□□□ 0.35
USP18-201ENST00000215794 DOHHQ9BU89 302 aa17.25■□□□□ 0.35
USP18-201ENST00000215794 APOOQ9BUR5 198 aa17.25■□□□□ 0.35
USP18-201ENST00000215794 PCBD2Q9H0N5 130 aa17.25■□□□□ 0.35
USP18-201ENST00000215794 C6orf106Q9H6K1 298 aaPredicted RBP17.25■□□□□ 0.35
USP18-201ENST00000215794 THUMPD1Q9NXG2 353 aaKnown RBP17.25■□□□□ 0.35
USP18-201ENST00000215794 SCHIP1Q9P0W5 487 aaPredicted RBP17.25■□□□□ 0.35
USP18-201ENST00000215794 AASSQ9UDR5 926 aa17.25■□□□□ 0.35
USP18-201ENST00000215794 PDZK1P1A8MUH7 402 aa17.24■□□□□ 0.35
USP18-201ENST00000215794 SLC16A6O15403 523 aa17.24■□□□□ 0.35
USP18-201ENST00000215794 NDUFS4O43181 175 aa17.24■□□□□ 0.35
USP18-201ENST00000215794 TRMUO75648 421 aaKnown RBP17.24■□□□□ 0.35
USP18-201ENST00000215794 DDCP20711 480 aa17.24■□□□□ 0.35
USP18-201ENST00000215794 OR1E2P47887 323 aa17.24■□□□□ 0.35
USP18-201ENST00000215794 PRIM2P49643 509 aa17.24■□□□□ 0.35
USP18-201ENST00000215794 RAB28P51157 221 aa17.24■□□□□ 0.35
USP18-201ENST00000215794 ARHGDIAP52565 204 aa17.24■□□□□ 0.35
USP18-201ENST00000215794 KIAA1161Q6NSJ0 714 aa17.24■□□□□ 0.35
USP18-201ENST00000215794 USP30Q70CQ3 517 aa17.24■□□□□ 0.35
USP18-201ENST00000215794 ZC3H7AQ8IWR0 971 aaKnown RBP17.24■□□□□ 0.35
USP18-201ENST00000215794 OR52E1Q8NGJ3 308 aa17.24■□□□□ 0.35
USP18-201ENST00000215794 OR2A1Q8NGT9 310 aa17.24■□□□□ 0.35
USP18-201ENST00000215794 CNIH3Q8TBE1 160 aa17.24■□□□□ 0.35
USP18-201ENST00000215794 SPPL2AQ8TCT8 520 aa17.24■□□□□ 0.35
USP18-201ENST00000215794 HDAC2Q92769 488 aaKnown RBP17.24■□□□□ 0.35
USP18-201ENST00000215794 MACROD1Q9BQ69 325 aa17.24■□□□□ 0.35
USP18-201ENST00000215794 AICDAQ9GZX7 198 aa17.24■□□□□ 0.35
USP18-201ENST00000215794 REEP1Q9H902 201 aa17.24■□□□□ 0.35
USP18-201ENST00000215794 CXorf21Q9HAI6 301 aa17.24■□□□□ 0.35
USP18-201ENST00000215794 FGF22Q9HCT0 170 aa17.24■□□□□ 0.35
USP18-201ENST00000215794 IRAK4Q9NWZ3 460 aa17.24■□□□□ 0.35
USP18-201ENST00000215794 SCML1Q9UN30 329 aa17.24■□□□□ 0.35
USP18-201ENST00000215794 SNX11Q9Y5W9 270 aa17.24■□□□□ 0.35
USP18-201ENST00000215794 CAPN5O15484 640 aaPredicted RBP17.24■□□□□ 0.35
USP18-201ENST00000215794 ITGAMP11215 1152 aa17.24■□□□□ 0.35
USP18-201ENST00000215794 EPHA2P29317 976 aa17.24■□□□□ 0.35
USP18-201ENST00000215794 CLK3P49761 638 aaKnown RBP17.24■□□□□ 0.35
USP18-201ENST00000215794 CLDN2P57739 230 aa17.24■□□□□ 0.35
USP18-201ENST00000215794 RPS26P62854 115 aaKnown RBP17.24■□□□□ 0.35
USP18-201ENST00000215794 SELENOWP63302 87 aa17.24■□□□□ 0.35
USP18-201ENST00000215794 EEF1A2Q05639 463 aaKnown RBP17.24■□□□□ 0.35
USP18-201ENST00000215794 RBM48Q5RL73 367 aaKnown RBP17.24■□□□□ 0.35
USP18-201ENST00000215794 GPR174Q9BXC1 333 aa17.24■□□□□ 0.35
USP18-201ENST00000215794 NAA50Q9GZZ1 169 aaKnown RBP17.24■□□□□ 0.35
USP18-201ENST00000215794 TEX10Q9NXF1 929 aaPredicted RBP17.24■□□□□ 0.35
USP18-201ENST00000215794 ICKQ9UPZ9 632 aa17.24■□□□□ 0.35
USP18-201ENST00000215794 ZNF451Q9Y4E5 1061 aa17.24■□□□□ 0.35
USP18-201ENST00000215794 POM121BA6NF01 834 aa17.23■□□□□ 0.35
USP18-201ENST00000215794 PRAMEF25A6NGN4 478 aa17.23■□□□□ 0.35
USP18-201ENST00000215794 PRR19A6NJB7 356 aa17.23■□□□□ 0.35
USP18-201ENST00000215794 TMX2-CTNND1H3BSU7 103 aa17.23■□□□□ 0.35
USP18-201ENST00000215794 SEMA4FO95754 770 aa17.23■□□□□ 0.35
USP18-201ENST00000215794 HTR1AP08908 422 aa17.23■□□□□ 0.35
USP18-201ENST00000215794 PKLRP30613 574 aa17.23■□□□□ 0.35
USP18-201ENST00000215794 RRM2P31350 389 aa17.23■□□□□ 0.35
USP18-201ENST00000215794 CXCL12P48061 93 aa17.23■□□□□ 0.35
USP18-201ENST00000215794 PLA2G16P53816 162 aa17.23■□□□□ 0.35
USP18-201ENST00000215794 PRDX1Q06830 199 aaKnown RBP17.23■□□□□ 0.35
USP18-201ENST00000215794 KRT33BQ14525 404 aa17.23■□□□□ 0.35
USP18-201ENST00000215794 RFX4Q33E94 735 aa17.23■□□□□ 0.35
USP18-201ENST00000215794 TBC1D25Q3MII6 688 aa17.23■□□□□ 0.35
USP18-201ENST00000215794 ZC3H12BQ5HYM0 836 aaKnown RBP17.23■□□□□ 0.35
USP18-201ENST00000215794 EPS8L2Q9H6S3 715 aa17.23■□□□□ 0.35
USP18-201ENST00000215794 FANCEQ9HB96 536 aa17.23■□□□□ 0.35
USP18-201ENST00000215794 TMEM184CQ9NVA4 438 aa17.23■□□□□ 0.35
USP18-201ENST00000215794 SLCO1B1Q9Y6L6 691 aa17.23■□□□□ 0.35
USP18-201ENST00000215794 ABCA7Q8IZY2 2146 aa17.23■□□□□ 0.35
USP18-201ENST00000215794 TMEM221A6NGB7 291 aa17.23■□□□□ 0.35
USP18-201ENST00000215794 H0Y8X5 98 aa17.23■□□□□ 0.35
USP18-201ENST00000215794 K7ESF4 209 aa17.23■□□□□ 0.35
USP18-201ENST00000215794 M0QX08 132 aa17.23■□□□□ 0.35
USP18-201ENST00000215794 M0R296 226 aa17.23■□□□□ 0.35
USP18-201ENST00000215794 APBB3O95704 486 aa17.23■□□□□ 0.35
USP18-201ENST00000215794 CDK6Q00534 326 aa17.23■□□□□ 0.35
USP18-201ENST00000215794 IL5RAQ01344 420 aa17.23■□□□□ 0.35
USP18-201ENST00000215794 FADDQ13158 208 aa17.23■□□□□ 0.35
USP18-201ENST00000215794 GPR107Q5VW38 600 aa17.23■□□□□ 0.35
USP18-201ENST00000215794 TRIM40Q6P9F5 258 aa17.23■□□□□ 0.35
USP18-201ENST00000215794 RAB42Q8N4Z0 105 aa17.23■□□□□ 0.35
USP18-201ENST00000215794 ATG16L2Q8NAA4 619 aa17.23■□□□□ 0.35
USP18-201ENST00000215794 EXOSC8Q96B26 276 aaKnown RBP17.23■□□□□ 0.35
USP18-201ENST00000215794 C12orf43Q96C57 262 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms