RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 PCCBP05166 539 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 BMP4P12644 408 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 CCND3P30281 292 aaPredicted RBP10.06□□□□□ -0.8
VCL-201ENST00000211998 SLC25A11Q02978 314 aaKnown RBP10.06□□□□□ -0.8
VCL-201ENST00000211998 NPY5RQ15761 445 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 FLYWCH1Q4VC44 716 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 ZNF425Q6IV72 752 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 HSDL2Q6YN16 418 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 OR4N4Q8N0Y3 316 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 JAGN1Q8N5M9 183 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 SGCDQ92629 289 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 HMCESQ96FZ2 354 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 ADAD1Q96M93 576 aaKnown RBP10.06□□□□□ -0.8
VCL-201ENST00000211998 RAB11FIP5Q9BXF6 653 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 HDHD5Q9BXW7 423 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 OR51E2Q9H255 320 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 KCNK13Q9HB14 408 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 OSER1Q9NX31 292 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 VPS29Q9UBQ0 182 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 CDC7O00311 574 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 SAP18O00422 153 aaKnown RBP10.06□□□□□ -0.8
VCL-201ENST00000211998 SFTPBP07988 381 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 TFPIP10646 304 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 HSD17B1P14061 328 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 PCSK6P29122 969 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 MCCD1P59942 119 aaPredicted RBP10.06□□□□□ -0.8
VCL-201ENST00000211998 SELPLGQ14242 412 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 SF3A2Q15428 464 aaKnown RBP10.06□□□□□ -0.8
VCL-201ENST00000211998 GFOD2Q3B7J2 385 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 CYP27C1Q4G0S4 372 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 SLC22A10Q63ZE4 541 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 CNIH2Q6PI25 160 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 ACDQ96AP0 544 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 C5orf34Q96MH7 638 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 OR5B12Q96R08 314 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 FCRL5Q96RD9 977 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 PBDC1Q9BVG4 233 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 GPR88Q9GZN0 384 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 RIMS3Q9UJD0 308 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 A0A1W2PPK0 400 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 KRBOX1C9JBD0 128 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 NIPSNAP2O75323 286 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 OGDHQ02218 1023 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 ATG9BQ674R7 924 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 TPGS2Q68CL5 300 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 WDR53Q7Z5U6 358 aaPredicted RBP10.06□□□□□ -0.8
VCL-201ENST00000211998 NRARPQ7Z6K4 114 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 CADM3Q8N126 398 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 SLC44A3Q8N4M1 653 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 ZFP41Q8N8Y5 198 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 OR51G2Q8NGK0 314 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 DDX1Q92499 740 aaKnown RBP10.06□□□□□ -0.8
VCL-201ENST00000211998 NUBP2Q9Y5Y2 271 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 CAMTA1Q9Y6Y1 1673 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 SOWAHBA6NEL2 793 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 SLC33A1O00400 549 aaPredicted RBP10.06□□□□□ -0.8
VCL-201ENST00000211998 MSR1P21757 451 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 UGT2B10P36537 528 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 ADH7P40394 386 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 INHBCP55103 352 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 PON3Q15166 354 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 SLC36A3Q495N2 470 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 GOLGA7Q7Z5G4 137 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 OR5T2Q8NGG2 359 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 OR13C4Q8NGS5 318 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 ZBED6CLQ96FA7 236 aaPredicted RBP10.06□□□□□ -0.8
VCL-201ENST00000211998 A0A1B0GV50 99 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 TMEM221A6NGB7 291 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 NME4O00746 187 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 GMFGO60234 142 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 EEDO75530 441 aaKnown RBP10.06□□□□□ -0.8
VCL-201ENST00000211998 HOXD11P31277 338 aaPredicted RBP10.06□□□□□ -0.8
VCL-201ENST00000211998 GRK6P43250 576 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 ERVFC1P60507 584 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 RFPL4BQ6ZWI9 263 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 SVBPQ8N300 66 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 ZDHHC1Q8WTX9 485 aa10.06□□□□□ -0.8
VCL-201ENST00000211998 SECISBP2Q96T21 854 aaKnown RBP10.06□□□□□ -0.8
VCL-201ENST00000211998 IGKV6D-41A0A0C4DH26 115 aa10.05□□□□□ -0.8
VCL-201ENST00000211998 LOC102723532A0A0G2JNH3 316 aa10.05□□□□□ -0.8
VCL-201ENST00000211998 WASHC1A8K0Z3 465 aa10.05□□□□□ -0.8
VCL-201ENST00000211998 EEF1E1-BLOC1S5C9J1V9 151 aa10.05□□□□□ -0.8
VCL-201ENST00000211998 PMM2O15305 246 aa10.05□□□□□ -0.8
VCL-201ENST00000211998 SC5DO75845 299 aa10.05□□□□□ -0.8
VCL-201ENST00000211998 NT5EP21589 574 aa10.05□□□□□ -0.8
VCL-201ENST00000211998 NSG1P42857 185 aa10.05□□□□□ -0.8
VCL-201ENST00000211998 ALDH3B1P43353 468 aa10.05□□□□□ -0.8
VCL-201ENST00000211998 ZNF280AP59817 542 aaPredicted RBP10.05□□□□□ -0.8
VCL-201ENST00000211998 EMX1Q04741 257 aaPredicted RBP10.05□□□□□ -0.8
VCL-201ENST00000211998 NIPAL4Q0D2K0 466 aa10.05□□□□□ -0.8
VCL-201ENST00000211998 GRM2Q14416 872 aa10.05□□□□□ -0.8
VCL-201ENST00000211998 MCEMP1Q8IX19 187 aa10.05□□□□□ -0.8
VCL-201ENST00000211998 TTTY10Q9BZA0 68 aa10.05□□□□□ -0.8
VCL-201ENST00000211998 PCDHGC4Q9Y5F7 938 aa10.05□□□□□ -0.8
VCL-201ENST00000211998 CACNG2Q9Y698 323 aa10.05□□□□□ -0.8
VCL-201ENST00000211998 E7ESA3 106 aa10.05□□□□□ -0.8
VCL-201ENST00000211998 MANBAO00462 879 aa10.05□□□□□ -0.8
VCL-201ENST00000211998 VNN1O95497 513 aa10.05□□□□□ -0.8
VCL-201ENST00000211998 FAM163BP0C2L3 166 aa10.05□□□□□ -0.8
VCL-201ENST00000211998 RPS5P46782 204 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms