RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 BARD1Q99728 777 aaKnown RBP11.54□□□□□ -0.56
CHPF2-201ENST00000035307 GPATCH1Q9BRR8 931 aaKnown RBP11.54□□□□□ -0.56
CHPF2-201ENST00000035307 TMEM168Q9H0V1 697 aa11.54□□□□□ -0.56
CHPF2-201ENST00000035307 KCNH6Q9H252 994 aa11.54□□□□□ -0.56
CHPF2-201ENST00000035307 RDH14Q9HBH5 336 aa11.54□□□□□ -0.56
CHPF2-201ENST00000035307 TRPS1Q9UHF7 1281 aa11.54□□□□□ -0.56
CHPF2-201ENST00000035307 RIMKLBQ9ULI2 386 aa11.54□□□□□ -0.56
CHPF2-201ENST00000035307 PCDHGA8Q9Y5G5 932 aa11.54□□□□□ -0.56
CHPF2-201ENST00000035307 SCN3AQ9NY46 2000 aa11.54□□□□□ -0.56
CHPF2-201ENST00000035307 KRBA1A5PL33 1030 aa11.54□□□□□ -0.56
CHPF2-201ENST00000035307 FRS3O43559 492 aa11.54□□□□□ -0.56
CHPF2-201ENST00000035307 PSIP1O75475 530 aaKnown RBP11.54□□□□□ -0.56
CHPF2-201ENST00000035307 SEMA4FO95754 770 aa11.54□□□□□ -0.56
CHPF2-201ENST00000035307 DCTP40126 519 aa11.54□□□□□ -0.56
CHPF2-201ENST00000035307 BTN3A2P78410 334 aa11.54□□□□□ -0.56
CHPF2-201ENST00000035307 RGS1Q08116 209 aa11.54□□□□□ -0.56
CHPF2-201ENST00000035307 SLC35F1Q5T1Q4 408 aa11.54□□□□□ -0.56
CHPF2-201ENST00000035307 ZNF773Q6PK81 442 aa11.54□□□□□ -0.56
CHPF2-201ENST00000035307 PACRGLQ8N7B6 248 aa11.54□□□□□ -0.56
CHPF2-201ENST00000035307 ANKFN1Q8N957 763 aa11.54□□□□□ -0.56
CHPF2-201ENST00000035307 KBTBD8Q8NFY9 601 aa11.54□□□□□ -0.56
CHPF2-201ENST00000035307 NCSTNQ92542 709 aa11.54□□□□□ -0.56
CHPF2-201ENST00000035307 TAMM41Q96BW9 452 aa11.54□□□□□ -0.56
CHPF2-201ENST00000035307 DMRTB1Q96MA1 342 aa11.54□□□□□ -0.56
CHPF2-201ENST00000035307 SLC38A3Q99624 504 aa11.54□□□□□ -0.56
CHPF2-201ENST00000035307 PRRG3Q9BZD7 231 aa11.54□□□□□ -0.56
CHPF2-201ENST00000035307 CCNB1IP1Q9NPC3 277 aa11.54□□□□□ -0.56
CHPF2-201ENST00000035307 A8MUA0 341 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 OLFM2O95897 454 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 LCKP06239 509 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 FCER2P06734 321 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 PRG2P13727 222 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 GGT1P19440 569 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 CDK3Q00526 305 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 LSAMPQ13449 338 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 TEAD4Q15561 434 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 DPY19L1Q2PZI1 675 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 TMEM196Q5HYL7 178 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 NHSL2Q5HYW2 709 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 FOXB2Q5VYV0 432 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 FAAH2Q6GMR7 532 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 MACC1Q6ZN28 852 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 COMMD6Q7Z4G1 85 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 ZZZ3Q8IYH5 903 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 GTF2H4Q92759 462 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 CPEB1Q9BZB8 566 aaKnown RBP11.53□□□□□ -0.56
CHPF2-201ENST00000035307 C3orf14Q9HBI5 128 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 NKIRAS2Q9NYR9 191 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 MAFFQ9ULX9 164 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 TCRBV3S1A0A5B6 114 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 ABCB7O75027 752 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 MATN4O95460 622 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 HLA-DQA2P01906 255 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 STSP08842 583 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 OR12D1P0DN82 309 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 BMP2P12643 396 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 ZNF26P17031 533 aaPredicted RBP11.53□□□□□ -0.56
CHPF2-201ENST00000035307 SLC5A2P31639 672 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 CCT3P49368 545 aaKnown RBP11.53□□□□□ -0.56
CHPF2-201ENST00000035307 TPTEP56180 551 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 CLDN8P56748 225 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 PPP2CBP62714 309 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 PPP2CAP67775 309 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 DMPKQ09013 629 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 GALNT1Q10472 559 aaPredicted RBP11.53□□□□□ -0.56
CHPF2-201ENST00000035307 TSTQ16762 297 aaKnown RBP11.53□□□□□ -0.56
CHPF2-201ENST00000035307 TIMM50Q3ZCQ8 353 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 EOGTQ5NDL2 527 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 HMBOX1Q6NT76 420 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 FAM131AQ6UXB0 335 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 Q6ZSR6 202 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 KRT74Q7RTS7 529 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 NLGN4XQ8N0W4 816 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 ZNF671Q8TAW3 534 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 UBE2FQ969M7 185 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 ZBED6CLQ96FA7 236 aaPredicted RBP11.53□□□□□ -0.56
CHPF2-201ENST00000035307 SLC38A2Q96QD8 506 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 ALPK1Q96QP1 1244 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 LHPPQ9H008 270 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 SLC23A2Q9UGH3 650 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 SSR3Q9UNL2 185 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 SNPHO15079 494 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 KMOO15229 486 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 TNFRSF21O75509 655 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 JUPP14923 745 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 C5AR1P21730 350 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 TALDO1P37837 337 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 CCR8P51685 355 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 EXOC3L2Q2M3D2 409 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 TBPL2Q6SJ96 375 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 PMEPA1Q969W9 287 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 ISG20Q96AZ6 181 aaKnown RBP11.53□□□□□ -0.56
CHPF2-201ENST00000035307 FAM83CQ9BQN1 747 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 DPH7Q9BTV6 452 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 CUEDC1Q9NWM3 386 aaPredicted RBP11.53□□□□□ -0.56
CHPF2-201ENST00000035307 COMMD3Q9UBI1 195 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 ABCG2Q9UNQ0 655 aa11.53□□□□□ -0.56
CHPF2-201ENST00000035307 SPIN1Q9Y657 262 aaPredicted RBP11.53□□□□□ -0.56
CHPF2-201ENST00000035307 ZFHX2Q9C0A1 2572 aaPredicted RBP11.53□□□□□ -0.56
CHPF2-201ENST00000035307 OR6C74A6NCV1 312 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms