RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Zfp595Q8BIN6 625 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Cnot2Q8C5L3 540 aaKnown RBP9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Fam110bQ8C739 366 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Ptcd2Q8R3K3 381 aaKnown RBP9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Olfr63Q8VBW9 316 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Olfr847Q8VFF4 312 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Slc35b2Q91ZN5 431 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Scgb3a1Q920D7 104 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 MynnQ99MD8 610 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Tex29Q9DA77 186 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Cmpk1Q9DBP5 196 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 St6galnac4Q9R2B6 360 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Insl5Q9WUG6 135 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Aldoart2A6ZI47 364 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Olfr620E9PZ66 313 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 B020004C17RikJ3QP07 232 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Znf143O70230 638 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Slc9a3r1P70441 355 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Emx1Q04742 257 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Wdr18Q4VBE8 431 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Tgoln1Q62313 353 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 ToxQ66JW3 526 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Inppl1Q6P549 1257 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Pgm2Q7TSV4 620 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 AgmoQ8BS35 447 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Olfr1250Q8VGM3 314 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Zdhhc6Q9CPV7 413 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Slc25a46Q9CQS4 418 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Mgme1Q9CXC3 338 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Rnf11Q9QYK7 154 aa9.8□□□□□ -0.84
Ubr1-201ENSMUST00000028728 ChadlE9Q7T7 748 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Scarb2O35114 478 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Fzd1O70421 642 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Bard1O70445 765 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Ighg1P01869 393 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Sox14Q04892 240 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Prelid2Q0VBB0 177 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Arl14Q3SXC5 192 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 MroQ7TNB4 248 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Hs3st5Q8BSL4 346 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Zim1Q8C393 579 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Lrrn3Q8CBC6 707 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Hmgcs1Q8JZK9 520 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Arl6ip5Q8R5J9 188 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Cir1Q9DA19 450 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Myh2G3UW82 1942 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 PigfO09101 219 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Lrrc3P59034 257 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Adamts15P59384 950 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 CamkmtQ3U2J5 323 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Eid2Q6X7S9 236 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Kirrel2Q7TSU7 700 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Slco4a1Q8K078 723 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Vmn1r38Q8R2E1 302 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Fam122cQ9D5J5 180 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Sema4gQ9WUH7 837 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 LckP06240 509 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Laptm5Q61168 261 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Adh7Q64437 374 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 DgkbQ6NS52 802 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 GabrpQ8QZW7 440 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Adap2Q8R2V5 381 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Olfr689Q8VG18 320 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Imp4Q8VHZ7 291 aaKnown RBP9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Sapcd1Q9CY86 146 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 5330417H12RikQ9D3P2 110 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Ing5Q9D8Y8 240 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Unc13bQ9Z1N9 1602 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 HgfQ08048 728 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Garem2Q6PAJ3 880 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Clec1aQ8BWY2 269 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Frs2Q8C180 508 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Zmiz2Q8CIE2 920 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Cacng6Q8VHW3 260 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Abcg4Q91WA9 646 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Ncbp2Q9CQ49 156 aaKnown RBP9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Col14a1Q80X19 1797 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Lrr1D3YY91 422 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Ddx6P54823 483 aaKnown RBP9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 TceancQ3US16 359 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Eif1aQ60872 144 aaKnown RBP9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Dalrd3Q6PJN8 538 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Paqr3Q6TCG8 311 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Eif1axQ8BMJ3 144 aaKnown RBP9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Zbtb37Q8C3U9 504 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Blzf1Q8R2X8 403 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 CpzQ8R4V4 654 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Cd209dQ91ZW8 237 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Mdm1Q9D067 708 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Lingo1Q9D1T0 614 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 A0A1W2P799 418 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Gabrr3B2RXA8 464 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Adh6aE9Q5Z6 375 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Fmo6J3QMN6 532 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Cacng1O70578 223 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Arhgap9Q1HDU4 648 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Clec2eQ80XD9 204 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Tmem168Q91VX9 697 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Prss23Q9D6X6 382 aa9.79□□□□□ -0.84
Ubr1-201ENSMUST00000028728 Alg13Q9D8C3 1166 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 40.6 ms