RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 CTSLP07711 333 aa13.21□□□□□ -0.29
PHGDH-233ENST00000642021 ZNF30P17039 623 aa13.21□□□□□ -0.29
PHGDH-233ENST00000642021 FEN1P39748 380 aaKnown RBP13.21□□□□□ -0.29
PHGDH-233ENST00000642021 PCBP3P57721 371 aaKnown RBP13.21□□□□□ -0.29
PHGDH-233ENST00000642021 FCHO2Q0JRZ9 810 aa13.21□□□□□ -0.29
PHGDH-233ENST00000642021 FRMPD2BQ6IN97 320 aa13.21□□□□□ -0.29
PHGDH-233ENST00000642021 CCDC190Q86UF4 302 aa13.21□□□□□ -0.29
PHGDH-233ENST00000642021 ADIPOR2Q86V24 386 aa13.21□□□□□ -0.29
PHGDH-233ENST00000642021 KLHDC8AQ8IYD2 350 aa13.21□□□□□ -0.29
PHGDH-233ENST00000642021 CYB5D2Q8WUJ1 264 aa13.21□□□□□ -0.29
PHGDH-233ENST00000642021 EFHD2Q96C19 240 aaPredicted RBP13.21□□□□□ -0.29
PHGDH-233ENST00000642021 PPCDCQ96CD2 204 aa13.21□□□□□ -0.29
PHGDH-233ENST00000642021 CRELD1Q96HD1 420 aa13.21□□□□□ -0.29
PHGDH-233ENST00000642021 IL4I1Q96RQ9 567 aa13.21□□□□□ -0.29
PHGDH-233ENST00000642021 NMNAT1Q9HAN9 279 aaPredicted RBP13.21□□□□□ -0.29
PHGDH-233ENST00000642021 PEX16Q9Y5Y5 336 aa13.21□□□□□ -0.29
PHGDH-233ENST00000642021 PCM1Q15154 2024 aa13.21□□□□□ -0.29
PHGDH-233ENST00000642021 ZAR1LA6NP61 321 aa13.21□□□□□ -0.29
PHGDH-233ENST00000642021 H3BM21 787 aa13.21□□□□□ -0.29
PHGDH-233ENST00000642021 PSMD11O00231 422 aa13.21□□□□□ -0.29
PHGDH-233ENST00000642021 TGM5O43548 720 aa13.21□□□□□ -0.29
PHGDH-233ENST00000642021 SEMA7AO75326 666 aa13.21□□□□□ -0.29
PHGDH-233ENST00000642021 CCNB2O95067 398 aa13.21□□□□□ -0.29
PHGDH-233ENST00000642021 MED26O95402 600 aa13.21□□□□□ -0.29
PHGDH-233ENST00000642021 MYCP01106 439 aaPredicted RBP13.21□□□□□ -0.29
PHGDH-233ENST00000642021 CHI3L1P36222 383 aaPredicted RBP13.21□□□□□ -0.29
PHGDH-233ENST00000642021 BMPR1AP36894 532 aa13.21□□□□□ -0.29
PHGDH-233ENST00000642021 LIM2P55344 173 aa13.21□□□□□ -0.29
PHGDH-233ENST00000642021 IFITM2Q01629 132 aa13.21□□□□□ -0.29
PHGDH-233ENST00000642021 RBBP4Q09028 425 aa13.21□□□□□ -0.29
PHGDH-233ENST00000642021 PDE7AQ13946 482 aa13.21□□□□□ -0.29
PHGDH-233ENST00000642021 FAM71E1Q6IPT2 247 aa13.21□□□□□ -0.29
PHGDH-233ENST00000642021 ZNF770Q6IQ21 691 aaPredicted RBP13.21□□□□□ -0.29
PHGDH-233ENST00000642021 PTCHD4Q6ZW05 846 aa13.21□□□□□ -0.29
PHGDH-233ENST00000642021 GEMIN6Q8WXD5 167 aaKnown RBP13.21□□□□□ -0.29
PHGDH-233ENST00000642021 LINC00597Q9H2U6 94 aa13.21□□□□□ -0.29
PHGDH-233ENST00000642021 HMX1Q9NP08 348 aaPredicted RBP13.21□□□□□ -0.29
PHGDH-233ENST00000642021 TAS2R9Q9NYW1 312 aa13.21□□□□□ -0.29
PHGDH-233ENST00000642021 ENPP4Q9Y6X5 453 aa13.21□□□□□ -0.29
PHGDH-233ENST00000642021 TRBV4-1A0A0J9YWV2 114 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 ATG13O75143 517 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 C1orf105O95561 183 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 CXCL10P02778 98 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 CKMT1AP12532 417 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 ITGA2P17301 1181 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 PTX3P26022 381 aaPredicted RBP13.2□□□□□ -0.3
PHGDH-233ENST00000642021 CCR2P41597 374 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 CASP3P42574 277 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 CRISP1P54107 249 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 DCDC1P59894 354 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 CDC42P60953 191 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 RPS26P62854 115 aaKnown RBP13.2□□□□□ -0.3
PHGDH-233ENST00000642021 TEKQ02763 1124 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 RPS26P11Q5JNZ5 115 aaPredicted RBP13.2□□□□□ -0.3
PHGDH-233ENST00000642021 BRAT1Q6PJG6 821 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 IL17RDQ8NFM7 739 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 WDR36Q8NI36 951 aaKnown RBP13.2□□□□□ -0.3
PHGDH-233ENST00000642021 GLYATL1Q969I3 302 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 ZNF558Q96NG5 402 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 FAM83CQ9BQN1 747 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 SLC6A16Q9GZN6 736 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 DMRT3Q9NQL9 472 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 CLEC2DQ9UHP7 191 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 OBSL1O75147 1896 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 TRAV19A0A0A6YYK7 116 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 ENTPD6O75354 484 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 SOAT1P35610 550 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 OPRD1P41143 372 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 PRLHRP49683 370 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 ATN1P54259 1190 aaPredicted RBP13.2□□□□□ -0.3
PHGDH-233ENST00000642021 OLR1P78380 273 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 STARD3Q14849 445 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 GRIN2CQ14957 1233 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 TRIM40Q6P9F5 258 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 ZNF367Q7RTV3 350 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 BCDIN3DQ7Z5W3 292 aaKnown RBP13.2□□□□□ -0.3
PHGDH-233ENST00000642021 TECPR1Q7Z6L1 1165 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 OXR1Q8N573 874 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 ZNF366Q8N895 744 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 VANGL1Q8TAA9 524 aaPredicted RBP13.2□□□□□ -0.3
PHGDH-233ENST00000642021 CXorf40BQ96DE9 158 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 OPALINQ96PE5 141 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 NUAK2Q9H093 628 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 ITGB1BP2Q9UKP3 347 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 A0A1W2PRB8 838 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 PIPSLA2A3N6 862 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 A8MVJ9 347 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 WASH3PC4AMC7 463 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 PLK4O00444 970 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 ASNA1O43681 348 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 ARAFP10398 606 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 CYP2A6P11509 494 aaPredicted RBP13.2□□□□□ -0.3
PHGDH-233ENST00000642021 SLC15A1P46059 708 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 PLAG1Q6DJT9 500 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 VPS35Q96QK1 796 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 WFDC6Q9BQY6 131 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 ZSCAN5AQ9BUG6 496 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 TAPBPLQ9BX59 468 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 BARHL1Q9BZE3 327 aa13.2□□□□□ -0.3
PHGDH-233ENST00000642021 HHATLQ9HCP6 504 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms