RNA–Protein interactions for RNA: ENST00000641944.1

CASC19-267, Transcript of cancer susceptibility 19, human

Gene CASC19, Length 1,117 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-267	ENST00000641944	HERC4	Q5GLZ8	1057 aa	Predicted RBP	4.38	□□□□□ -1.71
CASC19-267	ENST00000641944	C12orf60	Q5U649	245 aa		4.38	□□□□□ -1.71
CASC19-267	ENST00000641944	FAM53A	Q6NSI3	398 aa	Predicted RBP	4.38	□□□□□ -1.71
CASC19-267	ENST00000641944	HOGA1	Q86XE5	327 aa		4.38	□□□□□ -1.71
CASC19-267	ENST00000641944	RAB42	Q8N4Z0	105 aa		4.38	□□□□□ -1.71
CASC19-267	ENST00000641944	TRIM58	Q8NG06	486 aa		4.38	□□□□□ -1.71
CASC19-267	ENST00000641944	OR4D10	Q8NGI6	311 aa		4.38	□□□□□ -1.71
CASC19-267	ENST00000641944	SMAP2	Q8WU79	429 aa	Predicted RBP	4.38	□□□□□ -1.71
CASC19-267	ENST00000641944	MRPL38	Q96DV4	380 aa	Known RBP	4.38	□□□□□ -1.71
CASC19-267	ENST00000641944	PRAC1	Q96KF2	57 aa		4.38	□□□□□ -1.71
CASC19-267	ENST00000641944	C16orf45	Q96MC5	204 aa	Predicted RBP	4.38	□□□□□ -1.71
CASC19-267	ENST00000641944	INPP4A	Q96PE3	977 aa	Predicted RBP	4.38	□□□□□ -1.71
CASC19-267	ENST00000641944	S1PR3	Q99500	378 aa		4.38	□□□□□ -1.71
CASC19-267	ENST00000641944	FUCA2	Q9BTY2	467 aa		4.38	□□□□□ -1.71
CASC19-267	ENST00000641944	C3orf14	Q9HBI5	128 aa		4.38	□□□□□ -1.71
CASC19-267	ENST00000641944	NARF	Q9UHQ1	456 aa		4.38	□□□□□ -1.71
CASC19-267	ENST00000641944	PLCL2	Q9UPR0	1127 aa		4.38	□□□□□ -1.71
CASC19-267	ENST00000641944	PLEKHA6	Q9Y2H5	1048 aa		4.38	□□□□□ -1.71
CASC19-267	ENST00000641944	MRPS2	Q9Y399	296 aa	Known RBP	4.38	□□□□□ -1.71
CASC19-267	ENST00000641944	OR1A2	Q9Y585	309 aa		4.38	□□□□□ -1.71
CASC19-267	ENST00000641944	UMODL1	Q5DID0	1318 aa		4.38	□□□□□ -1.71
CASC19-267	ENST00000641944	MYH14	Q7Z406	1995 aa	Known RBP	4.38	□□□□□ -1.71
CASC19-267	ENST00000641944	FAM72C	H0Y354	149 aa		4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	ZNF195	O14628	629 aa		4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	P2RX6	O15547	441 aa		4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	KCNAB3	O43448	404 aa		4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	NME2P1	O60361	137 aa		4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	OR6A2	O95222	327 aa		4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	PTBP3	O95758	552 aa	Known RBP	4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	SERPINF2	P08697	491 aa		4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	CHRNB4	P30926	498 aa		4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	CHRNA3	P32297	505 aa		4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	FEN1	P39748	380 aa	Known RBP	4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	TNFRSF4	P43489	277 aa		4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	SLC6A12	P48065	614 aa		4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	CCR4	P51679	360 aa		4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	GEM	P55040	296 aa		4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	PAX9	P55771	341 aa		4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	HNRNPD	Q14103	355 aa	Known RBP	4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	TAB1	Q15750	504 aa		4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	FAM72A	Q5TYM5	149 aa		4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	NKAIN2	Q5VXU1	208 aa		4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	FAM72D	Q6L9T8	149 aa		4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	PTAR1	Q7Z6K3	402 aa	Predicted RBP	4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	NLRP14	Q86W24	1093 aa		4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	FAM72B	Q86X60	149 aa		4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	APLF	Q8IW19	511 aa	Predicted RBP	4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	DCUN1D3	Q8IWE4	304 aa		4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	CCDC197	Q8NCU1	140 aa		4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	OR6S1	Q8NH40	331 aa		4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	OR4L1	Q8NH43	312 aa		4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	MAPK15	Q8TD08	544 aa		4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	GPR148	Q8TDV2	347 aa		4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	AZIN2	Q96A70	460 aa		4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	MRPL53	Q96EL3	112 aa	Known RBP	4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	CXorf58	Q96LI9	332 aa		4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	GPR137	Q96N19	417 aa		4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	ERGIC2	Q96RQ1	377 aa		4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	NODAL	Q96S42	347 aa		4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	COQ7	Q99807	217 aa		4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	AGPAT1	Q99943	283 aa		4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	SIRPD	Q9H106	197 aa		4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	S100A14	Q9HCY8	104 aa		4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	HOMER3	Q9NSC5	361 aa		4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	FAM212B	Q9NTI7	297 aa	Predicted RBP	4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	SOHLH2	Q9NX45	425 aa		4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	MRTO4	Q9UKD2	239 aa	Known RBP	4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	PLA2G4C	Q9UP65	541 aa		4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	ATP8B3	O60423	1300 aa		4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	NEDD4	P46934	1319 aa		4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	RNF123	Q5XPI4	1314 aa		4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	BAZ1B	Q9UIG0	1483 aa	Known RBP	4.37	□□□□□ -1.71
CASC19-267	ENST00000641944	SMCHD1	A6NHR9	2005 aa		4.36	□□□□□ -1.71
CASC19-267	ENST00000641944		A0A087WW49	117 aa		4.36	□□□□□ -1.71
CASC19-267	ENST00000641944		A0A0U1RRA0	63 aa		4.36	□□□□□ -1.71
CASC19-267	ENST00000641944	hCG_38984	A0A1B0GV85	526 aa		4.36	□□□□□ -1.71
CASC19-267	ENST00000641944		A0A1W2PR80	420 aa		4.36	□□□□□ -1.71
CASC19-267	ENST00000641944	SRRM4	A7MD48	611 aa	Known RBP	4.36	□□□□□ -1.71
CASC19-267	ENST00000641944	TCP10L2	B9ZVM9	353 aa		4.36	□□□□□ -1.71
CASC19-267	ENST00000641944	CHEK1	O14757	476 aa		4.36	□□□□□ -1.71
CASC19-267	ENST00000641944	B4GAT1	O43505	415 aa		4.36	□□□□□ -1.71
CASC19-267	ENST00000641944	LRCH4	O75427	683 aa		4.36	□□□□□ -1.71
CASC19-267	ENST00000641944	PDGFB	P01127	241 aa	Predicted RBP	4.36	□□□□□ -1.71
CASC19-267	ENST00000641944	UMOD	P07911	640 aa		4.36	□□□□□ -1.71
CASC19-267	ENST00000641944	TPBGL	P0DKB5	382 aa		4.36	□□□□□ -1.71
CASC19-267	ENST00000641944	CEACAM1	P13688	526 aa		4.36	□□□□□ -1.71
CASC19-267	ENST00000641944	GIF	P27352	417 aa		4.36	□□□□□ -1.71
CASC19-267	ENST00000641944	AKT2	P31751	481 aa		4.36	□□□□□ -1.71
CASC19-267	ENST00000641944	GUCY2D	Q02846	1103 aa		4.36	□□□□□ -1.71
CASC19-267	ENST00000641944	C3AR1	Q16581	482 aa		4.36	□□□□□ -1.71
CASC19-267	ENST00000641944	SPANXN4	Q5MJ08	99 aa		4.36	□□□□□ -1.71
CASC19-267	ENST00000641944	RAET1G	Q6H3X3	334 aa		4.36	□□□□□ -1.71
CASC19-267	ENST00000641944	CAPN13	Q6MZZ7	669 aa	Predicted RBP	4.36	□□□□□ -1.71
CASC19-267	ENST00000641944	DCLK2	Q8N568	766 aa		4.36	□□□□□ -1.71
CASC19-267	ENST00000641944	OR5T2	Q8NGG2	359 aa		4.36	□□□□□ -1.71
CASC19-267	ENST00000641944	OR6M1	Q8NGM8	313 aa		4.36	□□□□□ -1.71
CASC19-267	ENST00000641944	CCDC110	Q8TBZ0	833 aa		4.36	□□□□□ -1.71
CASC19-267	ENST00000641944	RAB39B	Q96DA2	213 aa		4.36	□□□□□ -1.71
CASC19-267	ENST00000641944	C14orf79	Q96F83	325 aa		4.36	□□□□□ -1.71
CASC19-267	ENST00000641944	ZNF486	Q96H40	463 aa	Predicted RBP	4.36	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms