RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 DGKGP49619 791 aa16.06■□□□□ 0.16
PHGDH-223ENST00000641597 LRRC74AQ0VAA2 488 aa16.06■□□□□ 0.16
PHGDH-223ENST00000641597 PTGES3Q15185 160 aaKnown RBP16.06■□□□□ 0.16
PHGDH-223ENST00000641597 TEAD4Q15561 434 aa16.06■□□□□ 0.16
PHGDH-223ENST00000641597 ERAP2Q6P179 960 aa16.06■□□□□ 0.16
PHGDH-223ENST00000641597 FAM20CQ8IXL6 584 aa16.06■□□□□ 0.16
PHGDH-223ENST00000641597 FAM83FQ8NEG4 500 aaPredicted RBP16.06■□□□□ 0.16
PHGDH-223ENST00000641597 OR9A1PQ8NGU1 263 aa16.06■□□□□ 0.16
PHGDH-223ENST00000641597 ZNF675Q8TD23 568 aa16.06■□□□□ 0.16
PHGDH-223ENST00000641597 HTRA1Q92743 480 aa16.06■□□□□ 0.16
PHGDH-223ENST00000641597 MAGEB10Q96LZ2 347 aaPredicted RBP16.06■□□□□ 0.16
PHGDH-223ENST00000641597 COQ10AQ96MF6 247 aa16.06■□□□□ 0.16
PHGDH-223ENST00000641597 TOX2Q96NM4 488 aa16.06■□□□□ 0.16
PHGDH-223ENST00000641597 F2RL3Q96RI0 385 aa16.06■□□□□ 0.16
PHGDH-223ENST00000641597 SGPP1Q9BX95 441 aa16.06■□□□□ 0.16
PHGDH-223ENST00000641597 CCNB1IP1Q9NPC3 277 aa16.06■□□□□ 0.16
PHGDH-223ENST00000641597 ASF1AQ9Y294 204 aa16.06■□□□□ 0.16
PHGDH-223ENST00000641597 KIAA1549LQ6ZVL6 1849 aa16.06■□□□□ 0.16
PHGDH-223ENST00000641597 TRBV4-1A0A0J9YWV2 114 aa16.06■□□□□ 0.16
PHGDH-223ENST00000641597 KPNA4O00629 521 aaPredicted RBP16.06■□□□□ 0.16
PHGDH-223ENST00000641597 CDK1P06493 297 aa16.06■□□□□ 0.16
PHGDH-223ENST00000641597 C6P13671 934 aa16.06■□□□□ 0.16
PHGDH-223ENST00000641597 GTF2E2P29084 291 aaKnown RBP16.06■□□□□ 0.16
PHGDH-223ENST00000641597 TPP2P29144 1249 aaPredicted RBP16.06■□□□□ 0.16
PHGDH-223ENST00000641597 CTSKP43235 329 aa16.06■□□□□ 0.16
PHGDH-223ENST00000641597 LSM11P83369 360 aaKnown RBP eCLIP16.06■□□□□ 0.16
PHGDH-223ENST00000641597 NXPE4Q6UWF7 544 aa16.06■□□□□ 0.16
PHGDH-223ENST00000641597 AMER3Q8N944 861 aa16.06■□□□□ 0.16
PHGDH-223ENST00000641597 B3GNT7Q8NFL0 401 aa16.06■□□□□ 0.16
PHGDH-223ENST00000641597 FAM83CQ9BQN1 747 aa16.06■□□□□ 0.16
PHGDH-223ENST00000641597 ZNF197O14709 1029 aa16.05■□□□□ 0.16
PHGDH-223ENST00000641597 TBX1O43435 398 aa16.05■□□□□ 0.16
PHGDH-223ENST00000641597 CISD3P0C7P0 127 aa16.05■□□□□ 0.16
PHGDH-223ENST00000641597 HOXB6P17509 224 aaKnown RBP16.05■□□□□ 0.16
PHGDH-223ENST00000641597 PDE7AQ13946 482 aa16.05■□□□□ 0.16
PHGDH-223ENST00000641597 KIAA0907Q7Z7F0 614 aaPredicted RBP16.05■□□□□ 0.16
PHGDH-223ENST00000641597 LAS2Q8IYD9 372 aa16.05■□□□□ 0.16
PHGDH-223ENST00000641597 CELF5Q8N6W0 485 aaKnown RBP16.05■□□□□ 0.16
PHGDH-223ENST00000641597 HORMAD2Q8N7B1 307 aa16.05■□□□□ 0.16
PHGDH-223ENST00000641597 PHF10Q8WUB8 498 aaKnown RBP16.05■□□□□ 0.16
PHGDH-223ENST00000641597 IPCEF1Q8WWN9 437 aaPredicted RBP16.05■□□□□ 0.16
PHGDH-223ENST00000641597 MACROD1Q9BQ69 325 aa16.05■□□□□ 0.16
PHGDH-223ENST00000641597 ZDHHC5Q9C0B5 715 aa16.05■□□□□ 0.16
PHGDH-223ENST00000641597 C11orf16Q9NQ32 467 aa16.05■□□□□ 0.16
PHGDH-223ENST00000641597 MIEF1Q9NQG6 463 aa16.05■□□□□ 0.16
PHGDH-223ENST00000641597 DUSP12Q9UNI6 340 aa16.05■□□□□ 0.16
PHGDH-223ENST00000641597 LATO43561 262 aa16.05■□□□□ 0.16
PHGDH-223ENST00000641597 BCHEP06276 602 aa16.05■□□□□ 0.16
PHGDH-223ENST00000641597 PTPN2P17706 415 aa16.05■□□□□ 0.16
PHGDH-223ENST00000641597 CD40LGP29965 261 aa16.05■□□□□ 0.16
PHGDH-223ENST00000641597 MAGEA10P43363 369 aaPredicted RBP16.05■□□□□ 0.16
PHGDH-223ENST00000641597 XCR1P46094 333 aa16.05■□□□□ 0.16
PHGDH-223ENST00000641597 PNLIPRP1P54315 467 aa16.05■□□□□ 0.16
PHGDH-223ENST00000641597 HSPB3Q12988 150 aa16.05■□□□□ 0.16
PHGDH-223ENST00000641597 UTS2BQ765I0 119 aa16.05■□□□□ 0.16
PHGDH-223ENST00000641597 STX19Q8N4C7 294 aa16.05■□□□□ 0.16
PHGDH-223ENST00000641597 ANKRD53Q8N9V6 530 aa16.05■□□□□ 0.16
PHGDH-223ENST00000641597 ZBTB8BQ8NAP8 495 aaPredicted RBP16.05■□□□□ 0.16
PHGDH-223ENST00000641597 GOT1L1Q8NHS2 421 aaPredicted RBP16.05■□□□□ 0.16
PHGDH-223ENST00000641597 VANGL1Q8TAA9 524 aaPredicted RBP16.05■□□□□ 0.16
PHGDH-223ENST00000641597 STARD8Q92502 1023 aa16.05■□□□□ 0.16
PHGDH-223ENST00000641597 EHD1Q9H4M9 534 aa16.05■□□□□ 0.16
PHGDH-223ENST00000641597 CCDC177Q9NQR7 707 aaPredicted RBP16.05■□□□□ 0.16
PHGDH-223ENST00000641597 IMPAD1Q9NX62 359 aa16.05■□□□□ 0.16
PHGDH-223ENST00000641597 TAC3Q9UHF0 121 aa16.05■□□□□ 0.16
PHGDH-223ENST00000641597 CORO2BQ9UQ03 480 aa16.05■□□□□ 0.16
PHGDH-223ENST00000641597 HEATR5BQ9P2D3 2071 aa16.04■□□□□ 0.16
PHGDH-223ENST00000641597 PLPP1O14494 284 aa16.04■□□□□ 0.16
PHGDH-223ENST00000641597 TPST2O60704 377 aa16.04■□□□□ 0.16
PHGDH-223ENST00000641597 PRKRAO75569 313 aaKnown RBP16.04■□□□□ 0.16
PHGDH-223ENST00000641597 PPIBP23284 216 aaKnown RBP16.04■□□□□ 0.16
PHGDH-223ENST00000641597 ZNF33BQ06732 778 aa16.04■□□□□ 0.16
PHGDH-223ENST00000641597 ELP6Q0PNE2 266 aa16.04■□□□□ 0.16
PHGDH-223ENST00000641597 E2F2Q14209 437 aa16.04■□□□□ 0.16
PHGDH-223ENST00000641597 SEC23BQ15437 767 aa16.04■□□□□ 0.16
PHGDH-223ENST00000641597 ARMCX4Q5H9R4 360 aa16.04■□□□□ 0.16
PHGDH-223ENST00000641597 TMIGD1Q6UXZ0 262 aa16.04■□□□□ 0.16
PHGDH-223ENST00000641597 CEACAM20Q6UY09 585 aa16.04■□□□□ 0.16
PHGDH-223ENST00000641597 ZNF605Q86T29 641 aa16.04■□□□□ 0.16
PHGDH-223ENST00000641597 COMTD1Q86VU5 262 aa16.04■□□□□ 0.16
PHGDH-223ENST00000641597 MEX3DQ86XN8 651 aaKnown RBP16.04■□□□□ 0.16
PHGDH-223ENST00000641597 C12orf76Q8N812 135 aaPredicted RBP16.04■□□□□ 0.16
PHGDH-223ENST00000641597 NUS1Q96E22 293 aa16.04■□□□□ 0.16
PHGDH-223ENST00000641597 LGR4Q9BXB1 951 aa16.04■□□□□ 0.16
PHGDH-223ENST00000641597 MYO15AQ9UKN7 3530 aa16.04■□□□□ 0.16
PHGDH-223ENST00000641597 SPEGQ15772 3267 aa16.04■□□□□ 0.16
PHGDH-223ENST00000641597 CLDN24A6NM45 220 aa16.04■□□□□ 0.16
PHGDH-223ENST00000641597 A8MU76 341 aa16.04■□□□□ 0.16
PHGDH-223ENST00000641597 LZTS3O60299 673 aaPredicted RBP16.04■□□□□ 0.16
PHGDH-223ENST00000641597 GADD45GO95257 159 aa16.04■□□□□ 0.16
PHGDH-223ENST00000641597 IMPDH2P12268 514 aa16.04■□□□□ 0.16
PHGDH-223ENST00000641597 CNR2P34972 360 aa16.04■□□□□ 0.16
PHGDH-223ENST00000641597 SERPINB10P48595 397 aa16.04■□□□□ 0.16
PHGDH-223ENST00000641597 EIF2B2P49770 351 aaKnown RBP16.04■□□□□ 0.16
PHGDH-223ENST00000641597 C11orf96Q7Z7L8 435 aa16.04■□□□□ 0.16
PHGDH-223ENST00000641597 METTL4Q8N3J2 472 aa16.04■□□□□ 0.16
PHGDH-223ENST00000641597 MRPL43Q8N983 215 aaKnown RBP16.04■□□□□ 0.16
PHGDH-223ENST00000641597 SLC38A5Q8WUX1 472 aa16.04■□□□□ 0.16
PHGDH-223ENST00000641597 POP5Q969H6 163 aaKnown RBP16.04■□□□□ 0.16
PHGDH-223ENST00000641597 DACH2Q96NX9 599 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms