RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 PWP1Q13610 501 aa7.21□□□□□ -1.26
PHGDH-217ENST00000641455 CUL1Q13616 776 aa7.21□□□□□ -1.26
PHGDH-217ENST00000641455 RCAN2Q14206 197 aa7.21□□□□□ -1.26
PHGDH-217ENST00000641455 RPS6KA1Q15418 735 aa7.21□□□□□ -1.26
PHGDH-217ENST00000641455 TTLL9Q3SXZ7 439 aa7.21□□□□□ -1.26
PHGDH-217ENST00000641455 PLEKHM3Q6ZWE6 761 aa7.21□□□□□ -1.26
PHGDH-217ENST00000641455 CLNKQ7Z7G1 428 aa7.21□□□□□ -1.26
PHGDH-217ENST00000641455 LRRC56Q8IYG6 542 aaPredicted RBP7.21□□□□□ -1.26
PHGDH-217ENST00000641455 CA13Q8N1Q1 262 aa7.21□□□□□ -1.26
PHGDH-217ENST00000641455 TMEM132CQ8N3T6 1108 aa7.21□□□□□ -1.26
PHGDH-217ENST00000641455 RASGEF1CQ8N431 466 aa7.21□□□□□ -1.26
PHGDH-217ENST00000641455 ZNF441Q8N8Z8 693 aa7.21□□□□□ -1.26
PHGDH-217ENST00000641455 TC2NQ8N9U0 490 aa7.21□□□□□ -1.26
PHGDH-217ENST00000641455 MED18Q9BUE0 208 aa7.21□□□□□ -1.26
PHGDH-217ENST00000641455 OR8D2Q9GZM6 311 aa7.21□□□□□ -1.26
PHGDH-217ENST00000641455 RBSNQ9H1K0 784 aa7.21□□□□□ -1.26
PHGDH-217ENST00000641455 CXorf56Q9H5V9 222 aa7.21□□□□□ -1.26
PHGDH-217ENST00000641455 ZFP64Q9NPA5 681 aa7.21□□□□□ -1.26
PHGDH-217ENST00000641455 ACKR4Q9NPB9 350 aa7.21□□□□□ -1.26
PHGDH-217ENST00000641455 ADAP2Q9NPF8 381 aa7.21□□□□□ -1.26
PHGDH-217ENST00000641455 PRTFDC1Q9NRG1 225 aa7.21□□□□□ -1.26
PHGDH-217ENST00000641455 ZNHIT6Q9NWK9 470 aaKnown RBP7.21□□□□□ -1.26
PHGDH-217ENST00000641455 ZNF226Q9NYT6 803 aa7.21□□□□□ -1.26
PHGDH-217ENST00000641455 JKAMPQ9P055 326 aa7.21□□□□□ -1.26
PHGDH-217ENST00000641455 GALPQ9UBC7 116 aa7.21□□□□□ -1.26
PHGDH-217ENST00000641455 CRYL1Q9Y2S2 319 aa7.21□□□□□ -1.26
PHGDH-217ENST00000641455 CLCA3PQ9Y6N3 262 aa7.21□□□□□ -1.26
PHGDH-217ENST00000641455 ANK3Q12955 4377 aaKnown RBP7.21□□□□□ -1.26
PHGDH-217ENST00000641455 NINQ8N4C6 2090 aa7.21□□□□□ -1.26
PHGDH-217ENST00000641455 MYOCOSA0A1B0GUC4 107 aa7.2□□□□□ -1.26
PHGDH-217ENST00000641455 MBD3L3A6NE82 208 aaPredicted RBP7.2□□□□□ -1.26
PHGDH-217ENST00000641455 URADA6NGE7 173 aa7.2□□□□□ -1.26
PHGDH-217ENST00000641455 A8MV72 311 aaPredicted RBP7.2□□□□□ -1.26
PHGDH-217ENST00000641455 DEFB108AA8MXU0 73 aa7.2□□□□□ -1.26
PHGDH-217ENST00000641455 SIAH2O43255 324 aa7.2□□□□□ -1.26
PHGDH-217ENST00000641455 CTIFO43310 598 aaKnown RBP7.2□□□□□ -1.26
PHGDH-217ENST00000641455 TJP3O95049 919 aa7.2□□□□□ -1.26
PHGDH-217ENST00000641455 LRATO95237 230 aa7.2□□□□□ -1.26
PHGDH-217ENST00000641455 ESR1P03372 595 aa7.2□□□□□ -1.26
PHGDH-217ENST00000641455 TNNI3P19429 210 aa7.2□□□□□ -1.26
PHGDH-217ENST00000641455 GRIA1P42261 906 aa7.2□□□□□ -1.26
PHGDH-217ENST00000641455 CCR8P51685 355 aa7.2□□□□□ -1.26
PHGDH-217ENST00000641455 DIO3P55073 304 aa7.2□□□□□ -1.26
PHGDH-217ENST00000641455 GDF10P55107 478 aa7.2□□□□□ -1.26
PHGDH-217ENST00000641455 UBASH3AP57075 661 aa7.2□□□□□ -1.26
PHGDH-217ENST00000641455 COPS2P61201 443 aa7.2□□□□□ -1.26
PHGDH-217ENST00000641455 CCZ1BP86790 482 aa7.2□□□□□ -1.26
PHGDH-217ENST00000641455 CCZ1P86791 482 aaPredicted RBP7.2□□□□□ -1.26
PHGDH-217ENST00000641455 CRYZQ08257 329 aaKnown RBP7.2□□□□□ -1.26
PHGDH-217ENST00000641455 FOXF2Q12947 444 aa7.2□□□□□ -1.26
PHGDH-217ENST00000641455 TOMM20Q15388 145 aa7.2□□□□□ -1.26
PHGDH-217ENST00000641455 CLEC12BQ2HXU8 276 aa7.2□□□□□ -1.26
PHGDH-217ENST00000641455 ASTE1Q2TB18 679 aaPredicted RBP7.2□□□□□ -1.26
PHGDH-217ENST00000641455 SLC22A10Q63ZE4 541 aa7.2□□□□□ -1.26
PHGDH-217ENST00000641455 MRNIPQ6NTE8 343 aa7.2□□□□□ -1.26
PHGDH-217ENST00000641455 UBE2R2Q712K3 238 aaPredicted RBP7.2□□□□□ -1.26
PHGDH-217ENST00000641455 SDCCAG8Q86SQ7 713 aaPredicted RBP7.2□□□□□ -1.26
PHGDH-217ENST00000641455 LRRC25Q8N386 305 aaPredicted RBP7.2□□□□□ -1.26
PHGDH-217ENST00000641455 PRELID2Q8N945 189 aa7.2□□□□□ -1.26
PHGDH-217ENST00000641455 C9orf106Q8NAJ2 232 aa7.2□□□□□ -1.26
PHGDH-217ENST00000641455 FAM13CQ8NE31 585 aa7.2□□□□□ -1.26
PHGDH-217ENST00000641455 OR5L2Q8NGL0 311 aa7.2□□□□□ -1.26
PHGDH-217ENST00000641455 MBD3L2Q8NHZ7 208 aaPredicted RBP7.2□□□□□ -1.26
PHGDH-217ENST00000641455 GABPB2Q8TAK5 448 aaPredicted RBP7.2□□□□□ -1.26
PHGDH-217ENST00000641455 UTP15Q8TED0 518 aaKnown RBP7.2□□□□□ -1.26
PHGDH-217ENST00000641455 LPGAT1Q92604 370 aa7.2□□□□□ -1.26
PHGDH-217ENST00000641455 DAZLQ92904 295 aaKnown RBP7.2□□□□□ -1.26
PHGDH-217ENST00000641455 ZBED6CLQ96FA7 236 aaPredicted RBP7.2□□□□□ -1.26
PHGDH-217ENST00000641455 ZC3HAV1LQ96H79 300 aaKnown RBP7.2□□□□□ -1.26
PHGDH-217ENST00000641455 CCDC42Q96M95 316 aa7.2□□□□□ -1.26
PHGDH-217ENST00000641455 RUNDC3BQ96NL0 473 aa7.2□□□□□ -1.26
PHGDH-217ENST00000641455 BIRC8Q96P09 236 aa7.2□□□□□ -1.26
PHGDH-217ENST00000641455 TIMP4Q99727 224 aa7.2□□□□□ -1.26
PHGDH-217ENST00000641455 PIGQQ9BRB3 760 aa7.2□□□□□ -1.26
PHGDH-217ENST00000641455 SFXN3Q9BWM7 321 aa7.2□□□□□ -1.26
PHGDH-217ENST00000641455 CHRAC1Q9NRG0 131 aa7.2□□□□□ -1.26
PHGDH-217ENST00000641455 QPCTLQ9NXS2 382 aa7.2□□□□□ -1.26
PHGDH-217ENST00000641455 PPIEQ9UNP9 301 aaKnown RBP7.2□□□□□ -1.26
PHGDH-217ENST00000641455 SLC6A5Q9Y345 797 aa7.2□□□□□ -1.26
PHGDH-217ENST00000641455 CR1P17927 2039 aa7.2□□□□□ -1.26
PHGDH-217ENST00000641455 TRBC2A0A5B9 178 aa7.19□□□□□ -1.26
PHGDH-217ENST00000641455 GOLGA6L9A6NEM1 432 aa7.19□□□□□ -1.26
PHGDH-217ENST00000641455 LRRC3CA6NJW4 275 aa7.19□□□□□ -1.26
PHGDH-217ENST00000641455 CD8B2A6NJW9 211 aa7.19□□□□□ -1.26
PHGDH-217ENST00000641455 ERI2A8K979 691 aaKnown RBP7.19□□□□□ -1.26
PHGDH-217ENST00000641455 GOLGA8KD6RF30 607 aa7.19□□□□□ -1.26
PHGDH-217ENST00000641455 GOLGA6L22H0YM25 854 aa7.19□□□□□ -1.26
PHGDH-217ENST00000641455 GOLGA8TH3BQL2 631 aa7.19□□□□□ -1.26
PHGDH-217ENST00000641455 ZNF354AO60765 605 aaPredicted RBP7.19□□□□□ -1.26
PHGDH-217ENST00000641455 MPC1LP0DKB6 136 aa7.19□□□□□ -1.26
PHGDH-217ENST00000641455 SAT1P21673 171 aa7.19□□□□□ -1.26
PHGDH-217ENST00000641455 CYLC1P35663 651 aaPredicted RBP7.19□□□□□ -1.26
PHGDH-217ENST00000641455 SKIV2L2P42285 1042 aaKnown RBP7.19□□□□□ -1.26
PHGDH-217ENST00000641455 SESN2P58004 480 aaPredicted RBP7.19□□□□□ -1.26
PHGDH-217ENST00000641455 TPM4P67936 248 aa7.19□□□□□ -1.26
PHGDH-217ENST00000641455 RNF4P78317 190 aa7.19□□□□□ -1.26
PHGDH-217ENST00000641455 BTN3A2P78410 334 aa7.19□□□□□ -1.26
PHGDH-217ENST00000641455 CRADDP78560 199 aa7.19□□□□□ -1.26
PHGDH-217ENST00000641455 SRSF2Q01130 221 aaKnown RBP7.19□□□□□ -1.26
PHGDH-217ENST00000641455 ASPHQ12797 758 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms