RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 TLX2O43763 284 aaPredicted RBP13.17□□□□□ -0.3
SCARB2-227ENST00000640957 CLDN9O95484 217 aa13.17□□□□□ -0.3
SCARB2-227ENST00000640957 PROS1P07225 676 aa13.17□□□□□ -0.3
SCARB2-227ENST00000640957 MSL3P1P0C860 447 aa13.17□□□□□ -0.3
SCARB2-227ENST00000640957 MYL12AP19105 171 aa13.17□□□□□ -0.3
SCARB2-227ENST00000640957 CCND3P30281 292 aaPredicted RBP13.17□□□□□ -0.3
SCARB2-227ENST00000640957 RPL9P32969 192 aaKnown RBP13.17□□□□□ -0.3
SCARB2-227ENST00000640957 ZNF81P51508 661 aa13.17□□□□□ -0.3
SCARB2-227ENST00000640957 ARHGDIBP52566 201 aa13.17□□□□□ -0.3
SCARB2-227ENST00000640957 ACVR1Q04771 509 aa13.17□□□□□ -0.3
SCARB2-227ENST00000640957 PRKCZQ05513 592 aa13.17□□□□□ -0.3
SCARB2-227ENST00000640957 TIMM50Q3ZCQ8 353 aa13.17□□□□□ -0.3
SCARB2-227ENST00000640957 CST9Q5W186 159 aa13.17□□□□□ -0.3
SCARB2-227ENST00000640957 TMEM65Q6PI78 240 aa13.17□□□□□ -0.3
SCARB2-227ENST00000640957 ADAMTSL2Q86TH1 951 aa13.17□□□□□ -0.3
SCARB2-227ENST00000640957 RDH10Q8IZV5 341 aa13.17□□□□□ -0.3
SCARB2-227ENST00000640957 GABARAPL1Q9H0R8 117 aa13.17□□□□□ -0.3
SCARB2-227ENST00000640957 POPDC3Q9HBV1 291 aa13.17□□□□□ -0.3
SCARB2-227ENST00000640957 GKN1Q9NS71 199 aa13.17□□□□□ -0.3
SCARB2-227ENST00000640957 TXNL4BQ9NX01 149 aaKnown RBP13.17□□□□□ -0.3
SCARB2-227ENST00000640957 MBD1Q9UIS9 605 aaPredicted RBP13.17□□□□□ -0.3
SCARB2-227ENST00000640957 INMT-MINDY4F8WBC2 141 aa13.17□□□□□ -0.3
SCARB2-227ENST00000640957 HRO43593 1189 aa13.17□□□□□ -0.3
SCARB2-227ENST00000640957 GCM2O75603 506 aaPredicted RBP13.17□□□□□ -0.3
SCARB2-227ENST00000640957 PRAMEF1O95521 474 aa13.17□□□□□ -0.3
SCARB2-227ENST00000640957 PAHP00439 452 aa13.17□□□□□ -0.3
SCARB2-227ENST00000640957 SOX18P35713 384 aa13.17□□□□□ -0.3
SCARB2-227ENST00000640957 ETV6P41212 452 aa13.17□□□□□ -0.3
SCARB2-227ENST00000640957 PRIM2P49643 509 aa13.17□□□□□ -0.3
SCARB2-227ENST00000640957 AGFG1P52594 562 aaKnown RBP13.17□□□□□ -0.3
SCARB2-227ENST00000640957 CSTF1Q05048 431 aaKnown RBP13.17□□□□□ -0.3
SCARB2-227ENST00000640957 BOP1Q14137 746 aaKnown RBP13.17□□□□□ -0.3
SCARB2-227ENST00000640957 PCBP1Q15365 356 aaKnown RBP eCLIP13.17□□□□□ -0.3
SCARB2-227ENST00000640957 FBXO43Q4G163 708 aa13.17□□□□□ -0.3
SCARB2-227ENST00000640957 KIAA1841Q6NSI8 718 aa13.17□□□□□ -0.3
SCARB2-227ENST00000640957 NOXRED1Q6NXP6 359 aa13.17□□□□□ -0.3
SCARB2-227ENST00000640957 GET4Q7L5D6 327 aaPredicted RBP13.17□□□□□ -0.3
SCARB2-227ENST00000640957 RNF130Q86XS8 419 aa13.17□□□□□ -0.3
SCARB2-227ENST00000640957 TMEM145Q8NBT3 493 aa13.17□□□□□ -0.3
SCARB2-227ENST00000640957 TRPV1Q8NER1 839 aa13.17□□□□□ -0.3
SCARB2-227ENST00000640957 PPIEQ9UNP9 301 aaKnown RBP13.17□□□□□ -0.3
SCARB2-227ENST00000640957 MRPS7Q9Y2R9 242 aaKnown RBP13.17□□□□□ -0.3
SCARB2-227ENST00000640957 LYRM1O43325 122 aa13.16□□□□□ -0.3
SCARB2-227ENST00000640957 PRKAR2AP13861 404 aaKnown RBP13.16□□□□□ -0.3
SCARB2-227ENST00000640957 CXCL3P19876 107 aa13.16□□□□□ -0.3
SCARB2-227ENST00000640957 SOAT1P35610 550 aa13.16□□□□□ -0.3
SCARB2-227ENST00000640957 MC1RQ01726 317 aa13.16□□□□□ -0.3
SCARB2-227ENST00000640957 MBTPS1Q14703 1052 aa13.16□□□□□ -0.3
SCARB2-227ENST00000640957 PCBP2Q15366 365 aaKnown RBP eCLIP13.16□□□□□ -0.3
SCARB2-227ENST00000640957 ZSWIM7Q19AV6 140 aa13.16□□□□□ -0.3
SCARB2-227ENST00000640957 DUOXA1Q1HG43 343 aa13.16□□□□□ -0.3
SCARB2-227ENST00000640957 RPS26P11Q5JNZ5 115 aaPredicted RBP13.16□□□□□ -0.3
SCARB2-227ENST00000640957 CFAP77Q6ZQR2 320 aa13.16□□□□□ -0.3
SCARB2-227ENST00000640957 MON1AQ86VX9 555 aa13.16□□□□□ -0.3
SCARB2-227ENST00000640957 KRT73Q86Y46 540 aa13.16□□□□□ -0.3
SCARB2-227ENST00000640957 ZNF680Q8NEM1 530 aa13.16□□□□□ -0.3
SCARB2-227ENST00000640957 GNG14A0A1W2PPG7 69 aa13.16□□□□□ -0.3
SCARB2-227ENST00000640957 F5H5T6 163 aa13.16□□□□□ -0.3
SCARB2-227ENST00000640957 INSIG1O15503 277 aa13.16□□□□□ -0.3
SCARB2-227ENST00000640957 SEPT4O43236 478 aa13.16□□□□□ -0.3
SCARB2-227ENST00000640957 LANCL1O43813 399 aa13.16□□□□□ -0.3
SCARB2-227ENST00000640957 PRAMEF4O60810 478 aa13.16□□□□□ -0.3
SCARB2-227ENST00000640957 CFDP00746 253 aaPredicted RBP13.16□□□□□ -0.3
SCARB2-227ENST00000640957 TRBC1P01850 177 aa13.16□□□□□ -0.3
SCARB2-227ENST00000640957 RPIAP49247 311 aa13.16□□□□□ -0.3
SCARB2-227ENST00000640957 VSX2P58304 361 aaPredicted RBP13.16□□□□□ -0.3
SCARB2-227ENST00000640957 MAD2L1Q13257 205 aaPredicted RBP13.16□□□□□ -0.3
SCARB2-227ENST00000640957 PRAMEF9Q5VWM5 478 aa13.16□□□□□ -0.3
SCARB2-227ENST00000640957 KIAA1324Q6UXG2 1013 aaKnown RBP13.16□□□□□ -0.3
SCARB2-227ENST00000640957 LIPIQ6XZB0 460 aa13.16□□□□□ -0.3
SCARB2-227ENST00000640957 ZNF367Q7RTV3 350 aa13.16□□□□□ -0.3
SCARB2-227ENST00000640957 LHFPL3Q86UP9 236 aa13.16□□□□□ -0.3
SCARB2-227ENST00000640957 RBM45Q8IUH3 476 aaKnown RBP13.16□□□□□ -0.3
SCARB2-227ENST00000640957 PLPP6Q8IY26 295 aa13.16□□□□□ -0.3
SCARB2-227ENST00000640957 CREB3L4Q8TEY5 395 aa13.16□□□□□ -0.3
SCARB2-227ENST00000640957 PIGKQ92643 395 aa13.16□□□□□ -0.3
SCARB2-227ENST00000640957 MS4A3Q96HJ5 214 aa13.16□□□□□ -0.3
SCARB2-227ENST00000640957 C1QTNF3Q9BXJ4 246 aa13.16□□□□□ -0.3
SCARB2-227ENST00000640957 CHIAQ9BZP6 476 aa13.16□□□□□ -0.3
SCARB2-227ENST00000640957 SAP130Q9H0E3 1048 aa13.16□□□□□ -0.3
SCARB2-227ENST00000640957 PLEKHB1Q9UF11 243 aaPredicted RBP13.16□□□□□ -0.3
SCARB2-227ENST00000640957 VPS9D1Q9Y2B5 631 aa13.16□□□□□ -0.3
SCARB2-227ENST00000640957 FCF1Q9Y324 198 aaKnown RBP13.16□□□□□ -0.3
SCARB2-227ENST00000640957 PARP14Q460N5 1801 aa13.16□□□□□ -0.3
SCARB2-227ENST00000640957 GON4LQ3T8J9 2241 aa13.16□□□□□ -0.3
SCARB2-227ENST00000640957 PIPSLA2A3N6 862 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 ANKRD66B4E2M5 251 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 K7ERQ8 282 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 LGALS8O00214 317 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 SLC22A5O76082 557 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 HOXC13P31276 330 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 CSTF2P33240 577 aaKnown RBP eCLIP13.15□□□□□ -0.3
SCARB2-227ENST00000640957 PTGER1P34995 402 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 SGSHP51688 502 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 MAB21L1Q13394 359 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 GLYR1Q49A26 553 aaPredicted RBP13.15□□□□□ -0.3
SCARB2-227ENST00000640957 RFLNAQ6ZTI6 216 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 SLC30A8Q8IWU4 369 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 KCNJ9Q92806 393 aa13.15□□□□□ -0.3
SCARB2-227ENST00000640957 FERD3LQ96RJ6 166 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms