RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 INAQ16352 499 aa16.56■□□□□ 0.24
PNKP-230ENST00000638016 FAM83EQ2M2I3 478 aa16.56■□□□□ 0.24
PNKP-230ENST00000638016 GRHL2Q6ISB3 625 aa16.56■□□□□ 0.24
PNKP-230ENST00000638016 MED27Q6P2C8 311 aa16.56■□□□□ 0.24
PNKP-230ENST00000638016 C16orf47Q6ZP98 133 aaPredicted RBP16.56■□□□□ 0.24
PNKP-230ENST00000638016 RPS19BP1Q86WX3 136 aaKnown RBP16.56■□□□□ 0.24
PNKP-230ENST00000638016 ZNF227Q86WZ6 799 aa16.56■□□□□ 0.24
PNKP-230ENST00000638016 LAS2Q8IYD9 372 aa16.56■□□□□ 0.24
PNKP-230ENST00000638016 LRRN4CLQ8ND94 238 aa16.56■□□□□ 0.24
PNKP-230ENST00000638016 SUN3Q8TAQ9 357 aa16.56■□□□□ 0.24
PNKP-230ENST00000638016 SEC16BQ96JE7 1060 aa16.56■□□□□ 0.24
PNKP-230ENST00000638016 UTP23Q9BRU9 249 aaKnown RBP16.56■□□□□ 0.24
PNKP-230ENST00000638016 NPLQ9BXD5 320 aaPredicted RBP16.56■□□□□ 0.24
PNKP-230ENST00000638016 TSPAN10Q9H1Z9 355 aaPredicted RBP16.56■□□□□ 0.24
PNKP-230ENST00000638016 LIN28AQ9H9Z2 209 aaKnown RBP16.56■□□□□ 0.24
PNKP-230ENST00000638016 KCMF1Q9P0J7 381 aa16.56■□□□□ 0.24
PNKP-230ENST00000638016 WIPF3A6NGB9 483 aa16.55■□□□□ 0.24
PNKP-230ENST00000638016 SYCE1LA8MT33 242 aa16.55■□□□□ 0.24
PNKP-230ENST00000638016 LRRTM2O43300 516 aa16.55■□□□□ 0.24
PNKP-230ENST00000638016 KLK8O60259 260 aa16.55■□□□□ 0.24
PNKP-230ENST00000638016 LDB3O75112 727 aa16.55■□□□□ 0.24
PNKP-230ENST00000638016 PRKRAO75569 313 aaKnown RBP16.55■□□□□ 0.24
PNKP-230ENST00000638016 INHBAP08476 426 aa16.55■□□□□ 0.24
PNKP-230ENST00000638016 EPB42P16452 691 aa16.55■□□□□ 0.24
PNKP-230ENST00000638016 ATP5A1P25705 553 aaKnown RBP16.55■□□□□ 0.24
PNKP-230ENST00000638016 MAGEA12P43365 314 aa16.55■□□□□ 0.24
PNKP-230ENST00000638016 ACAP2Q15057 778 aa16.55■□□□□ 0.24
PNKP-230ENST00000638016 HIST2H2ACQ16777 129 aaPredicted RBP16.55■□□□□ 0.24
PNKP-230ENST00000638016 C1QL3Q5VWW1 255 aa16.55■□□□□ 0.24
PNKP-230ENST00000638016 HIST2H2AA3Q6FI13 130 aa16.55■□□□□ 0.24
PNKP-230ENST00000638016 GALNTL5Q7Z4T8 443 aa16.55■□□□□ 0.24
PNKP-230ENST00000638016 GOLGA7Q7Z5G4 137 aa16.55■□□□□ 0.24
PNKP-230ENST00000638016 ACOT4Q8N9L9 421 aa16.55■□□□□ 0.24
PNKP-230ENST00000638016 MNS1Q8NEH6 495 aa16.55■□□□□ 0.24
PNKP-230ENST00000638016 ARMC2Q8NEN0 867 aa16.55■□□□□ 0.24
PNKP-230ENST00000638016 HUS1BQ8NHY5 278 aa16.55■□□□□ 0.24
PNKP-230ENST00000638016 DCAKDQ8WVC6 231 aa16.55■□□□□ 0.24
PNKP-230ENST00000638016 NCLNQ969V3 563 aa16.55■□□□□ 0.24
PNKP-230ENST00000638016 SCMH1Q96GD3 660 aa16.55■□□□□ 0.24
PNKP-230ENST00000638016 C5orf34Q96MH7 638 aa16.55■□□□□ 0.24
PNKP-230ENST00000638016 CDK15Q96Q40 435 aa16.55■□□□□ 0.24
PNKP-230ENST00000638016 MTERF1Q99551 399 aaKnown RBP16.55■□□□□ 0.24
PNKP-230ENST00000638016 NFU1Q9UMS0 254 aa16.55■□□□□ 0.24
PNKP-230ENST00000638016 ANGPTL3Q9Y5C1 460 aa16.55■□□□□ 0.24
PNKP-230ENST00000638016 A0A088AWK7 358 aa16.54■□□□□ 0.24
PNKP-230ENST00000638016 ZNHIT1O43257 154 aa16.54■□□□□ 0.24
PNKP-230ENST00000638016 UNC5CO95185 931 aa16.54■□□□□ 0.24
PNKP-230ENST00000638016 ZNF10P21506 573 aaPredicted RBP16.54■□□□□ 0.24
PNKP-230ENST00000638016 ALDH18A1P54886 795 aaKnown RBP16.54■□□□□ 0.24
PNKP-230ENST00000638016 MLF1P58340 268 aa16.54■□□□□ 0.24
PNKP-230ENST00000638016 GFRALQ6UXV0 394 aa16.54■□□□□ 0.24
PNKP-230ENST00000638016 RPS27LQ71UM5 84 aaKnown RBP16.54■□□□□ 0.24
PNKP-230ENST00000638016 ZNF321PQ8N8H1 164 aa16.54■□□□□ 0.24
PNKP-230ENST00000638016 PTGR2Q8N8N7 351 aaPredicted RBP16.54■□□□□ 0.24
PNKP-230ENST00000638016 B3GNT7Q8NFL0 401 aa16.54■□□□□ 0.24
PNKP-230ENST00000638016 ISL2Q96A47 359 aa16.54■□□□□ 0.24
PNKP-230ENST00000638016 PHF21BQ96EK2 531 aa16.54■□□□□ 0.24
PNKP-230ENST00000638016 NSUN5Q96P11 429 aaKnown RBP16.54■□□□□ 0.24
PNKP-230ENST00000638016 KCNC2Q96PR1 638 aa16.54■□□□□ 0.24
PNKP-230ENST00000638016 DMRT3Q9NQL9 472 aa16.54■□□□□ 0.24
PNKP-230ENST00000638016 LRFN1Q9P244 771 aa16.54■□□□□ 0.24
PNKP-230ENST00000638016 ABI3Q9P2A4 366 aa16.54■□□□□ 0.24
PNKP-230ENST00000638016 XPR1Q9UBH6 696 aa16.54■□□□□ 0.24
PNKP-230ENST00000638016 FBXW2Q9UKT8 454 aa16.54■□□□□ 0.24
PNKP-230ENST00000638016 RNF11Q9Y3C5 154 aa16.54■□□□□ 0.24
PNKP-230ENST00000638016 TRIM49D1C9J1S8 452 aa16.53■□□□□ 0.24
PNKP-230ENST00000638016 ETHE1O95571 254 aa16.53■□□□□ 0.24
PNKP-230ENST00000638016 HIST1H1TP22492 207 aaPredicted RBP16.53■□□□□ 0.24
PNKP-230ENST00000638016 EEF1DP29692 281 aaKnown RBP16.53■□□□□ 0.24
PNKP-230ENST00000638016 SSR2P43308 183 aa16.53■□□□□ 0.24
PNKP-230ENST00000638016 GPR143P51810 404 aa16.53■□□□□ 0.24
PNKP-230ENST00000638016 HSD17B7P56937 341 aa16.53■□□□□ 0.24
PNKP-230ENST00000638016 RPS13P62277 151 aaKnown RBP16.53■□□□□ 0.24
PNKP-230ENST00000638016 PCDH1Q08174 1060 aa16.53■□□□□ 0.24
PNKP-230ENST00000638016 GTF2H2Q13888 395 aa16.53■□□□□ 0.24
PNKP-230ENST00000638016 PCBP2Q15366 365 aaKnown RBP eCLIP16.53■□□□□ 0.24
PNKP-230ENST00000638016 CPSF6Q16630 551 aaKnown RBP eCLIP16.53■□□□□ 0.24
PNKP-230ENST00000638016 C4orf17Q53FE4 359 aa16.53■□□□□ 0.24
PNKP-230ENST00000638016 KHDRBS2Q5VWX1 349 aaKnown RBP16.53■□□□□ 0.24
PNKP-230ENST00000638016 GTF2H2CQ6P1K8 395 aa16.53■□□□□ 0.24
PNKP-230ENST00000638016 KLC3Q6P597 504 aa16.53■□□□□ 0.24
PNKP-230ENST00000638016 FJX1Q86VR8 437 aa16.53■□□□□ 0.24
PNKP-230ENST00000638016 OR4N5Q8IXE1 308 aa16.53■□□□□ 0.24
PNKP-230ENST00000638016 ZNF595Q8IYB9 648 aa16.53■□□□□ 0.24
PNKP-230ENST00000638016 GSPT2Q8IYD1 628 aaKnown RBP16.53■□□□□ 0.24
PNKP-230ENST00000638016 LGI4Q8N135 537 aa16.53■□□□□ 0.24
PNKP-230ENST00000638016 DOK4Q8TEW6 326 aa16.53■□□□□ 0.24
PNKP-230ENST00000638016 SCYL1Q96KG9 808 aa16.53■□□□□ 0.24
PNKP-230ENST00000638016 FRMD6Q96NE9 622 aa16.53■□□□□ 0.24
PNKP-230ENST00000638016 DEFB126Q9BYW3 111 aa16.53■□□□□ 0.24
PNKP-230ENST00000638016 ACTR8Q9H981 624 aa16.53■□□□□ 0.24
PNKP-230ENST00000638016 SH3BGRL2Q9UJC5 107 aa16.53■□□□□ 0.24
PNKP-230ENST00000638016 PCNX1Q96RV3 2341 aa16.53■□□□□ 0.24
PNKP-230ENST00000638016 WASHC1A8K0Z3 465 aa16.52■□□□□ 0.24
PNKP-230ENST00000638016 CLDN4O14493 209 aa16.52■□□□□ 0.24
PNKP-230ENST00000638016 PLPP1O14494 284 aa16.52■□□□□ 0.24
PNKP-230ENST00000638016 OR7A17O14581 309 aa16.52■□□□□ 0.24
PNKP-230ENST00000638016 SCELO95171 688 aa16.52■□□□□ 0.24
PNKP-230ENST00000638016 DDAH2O95865 285 aa16.52■□□□□ 0.24
PNKP-230ENST00000638016 IFNA16P05015 189 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms