RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	UBASH3B	Q8TF42	649 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	CHCHD6	Q9BRQ6	235 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	TAPBPL	Q9BX59	468 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	P2RX2	Q9UBL9	471 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	PADI2	Q9Y2J8	665 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	WDR45	Q9Y484	360 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	OAS3	Q9Y6K5	1087 aa	Known RBP	13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	CAPN5	O15484	640 aa	Predicted RBP	13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	CREG1	O75629	220 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	EEFSEC	P57772	596 aa	Known RBP	13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	GFOD2	Q3B7J2	385 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	TTLL10	Q6ZVT0	673 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	PGBD5	Q8N414	524 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	CPXM2	Q8N436	756 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	OR10G2	Q8NGC3	310 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	BORCS5	Q969J3	196 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	WBP2	Q969T9	261 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	PPP1R14B	Q96C90	147 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	OMA1	Q96E52	524 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	KCNC2	Q96PR1	638 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	SLC6A17	Q9H1V8	727 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	ABCB9	Q9NP78	766 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	SLAMF7	Q9NQ25	335 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	STOX2	Q9P2F5	926 aa	Predicted RBP	13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	NME7	Q9Y5B8	376 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	PRSS21	Q9Y6M0	314 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	DOCK3	Q8IZD9	2030 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	YKT6	O15498	198 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	CD9	P21926	228 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	JAK1	P23458	1154 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	FMO3	P31513	532 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	ZXDB	P98169	803 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	SP140	Q13342	867 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	RNASE12	Q5GAN4	147 aa	Known RBP	13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	TMEM53	Q6P2H8	277 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	PLA2G15	Q8NCC3	412 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	PSMA8	Q8TAA3	256 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	RASSF5	Q8WWW0	418 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	TMBIM1	Q969X1	311 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	ARRDC3	Q96B67	414 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	BIRC7	Q96CA5	298 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	OCEL1	Q9H607	264 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	POPDC3	Q9HBV1	291 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	DNAJB9	Q9UBS3	223 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	TTC3	P53804	2025 aa		13.74	□□□□□ -0.21
NEDD4L-238	ENST00000635997	TAF1L	Q8IZX4	1826 aa		13.73	□□□□□ -0.21
NEDD4L-238	ENST00000635997		H3BSH0	61 aa		13.73	□□□□□ -0.21
NEDD4L-238	ENST00000635997	TMCC2	O75069	709 aa		13.73	□□□□□ -0.21
NEDD4L-238	ENST00000635997	GIMD1	P0DJR0	217 aa		13.73	□□□□□ -0.21
NEDD4L-238	ENST00000635997	HMGA1	P17096	107 aa	Known RBP	13.73	□□□□□ -0.21
NEDD4L-238	ENST00000635997	ACADL	P28330	430 aa		13.73	□□□□□ -0.21
NEDD4L-238	ENST00000635997	SUOX	P51687	545 aa		13.73	□□□□□ -0.21
NEDD4L-238	ENST00000635997	CDH15	P55291	814 aa		13.73	□□□□□ -0.21
NEDD4L-238	ENST00000635997	MPP7	Q5T2T1	576 aa		13.73	□□□□□ -0.21
NEDD4L-238	ENST00000635997	ZNF551	Q7Z340	670 aa	Predicted RBP	13.73	□□□□□ -0.21
NEDD4L-238	ENST00000635997	JAZF1	Q86VZ6	243 aa		13.73	□□□□□ -0.21
NEDD4L-238	ENST00000635997	OR2A12	Q8NGT7	310 aa		13.73	□□□□□ -0.21
NEDD4L-238	ENST00000635997	OR4C6	Q8NH72	309 aa		13.73	□□□□□ -0.21
NEDD4L-238	ENST00000635997	SNX33	Q8WV41	574 aa		13.73	□□□□□ -0.21
NEDD4L-238	ENST00000635997	SLC45A3	Q96JT2	553 aa		13.73	□□□□□ -0.21
NEDD4L-238	ENST00000635997	GPR179	Q6PRD1	2367 aa		13.73	□□□□□ -0.21
NEDD4L-238	ENST00000635997	C2orf74	A8MZ97	194 aa		13.73	□□□□□ -0.21
NEDD4L-238	ENST00000635997	RGS10	O43665	173 aa		13.73	□□□□□ -0.21
NEDD4L-238	ENST00000635997	GABBR2	O75899	941 aa		13.73	□□□□□ -0.21
NEDD4L-238	ENST00000635997	ZNF24	P17028	368 aa		13.73	□□□□□ -0.21
NEDD4L-238	ENST00000635997	ARPC4	P59998	168 aa		13.73	□□□□□ -0.21
NEDD4L-238	ENST00000635997	LETMD1	Q6P1Q0	360 aa		13.73	□□□□□ -0.21
NEDD4L-238	ENST00000635997	CYS1	Q717R9	158 aa		13.73	□□□□□ -0.21
NEDD4L-238	ENST00000635997	OR10H4	Q8NGA5	316 aa		13.73	□□□□□ -0.21
NEDD4L-238	ENST00000635997	CMTM6	Q9NX76	183 aa		13.73	□□□□□ -0.21
NEDD4L-238	ENST00000635997	DKK3	Q9UBP4	350 aa		13.73	□□□□□ -0.21
NEDD4L-238	ENST00000635997	ZNF451	Q9Y4E5	1061 aa		13.73	□□□□□ -0.21
NEDD4L-238	ENST00000635997	RIIAD1	A6NNX1	92 aa		13.73	□□□□□ -0.21
NEDD4L-238	ENST00000635997	TSC22D2	O75157	780 aa		13.73	□□□□□ -0.21
NEDD4L-238	ENST00000635997	CCR7	P32248	378 aa		13.73	□□□□□ -0.21
NEDD4L-238	ENST00000635997	PSMD4	P55036	377 aa	Known RBP	13.73	□□□□□ -0.21
NEDD4L-238	ENST00000635997	RACK1	P63244	317 aa	Known RBP	13.73	□□□□□ -0.21
NEDD4L-238	ENST00000635997	PLGLB1	Q02325	96 aa		13.73	□□□□□ -0.21
NEDD4L-238	ENST00000635997	CLIP4	Q8N3C7	705 aa		13.73	□□□□□ -0.21
NEDD4L-238	ENST00000635997	RETREG1	Q9H6L5	497 aa		13.73	□□□□□ -0.21
NEDD4L-238	ENST00000635997	MAU2	Q9Y6X3	613 aa		13.73	□□□□□ -0.21
NEDD4L-238	ENST00000635997	COL11A2	P13942	1736 aa	Predicted RBP	13.73	□□□□□ -0.21
NEDD4L-238	ENST00000635997	CASK	O14936	926 aa		13.72	□□□□□ -0.21
NEDD4L-238	ENST00000635997	UGT2B11	O75310	529 aa		13.72	□□□□□ -0.21
NEDD4L-238	ENST00000635997	RAB28	P51157	221 aa		13.72	□□□□□ -0.21
NEDD4L-238	ENST00000635997	BNC1	Q01954	994 aa		13.72	□□□□□ -0.21
NEDD4L-238	ENST00000635997	ABHD18	Q0P651	414 aa		13.72	□□□□□ -0.21
NEDD4L-238	ENST00000635997	COX10	Q12887	443 aa		13.72	□□□□□ -0.21
NEDD4L-238	ENST00000635997	C3orf38	Q5JPI3	329 aa		13.72	□□□□□ -0.21
NEDD4L-238	ENST00000635997	CEP78	Q5JTW2	689 aa		13.72	□□□□□ -0.21
NEDD4L-238	ENST00000635997	CLECL1	Q8IZS7	167 aa		13.72	□□□□□ -0.21
NEDD4L-238	ENST00000635997	RNF175	Q8N4F7	328 aa		13.72	□□□□□ -0.21
NEDD4L-238	ENST00000635997	DEFB124	Q8NES8	71 aa		13.72	□□□□□ -0.21
NEDD4L-238	ENST00000635997	REEP4	Q9H6H4	257 aa		13.72	□□□□□ -0.21
NEDD4L-238	ENST00000635997	ADAM30	Q9UKF2	790 aa		13.72	□□□□□ -0.21
NEDD4L-238	ENST00000635997	GMEB1	Q9Y692	573 aa		13.72	□□□□□ -0.21
NEDD4L-238	ENST00000635997	ELOA3D	A6NLF2	546 aa	Predicted RBP	13.72	□□□□□ -0.21
NEDD4L-238	ENST00000635997	SOX1	O00570	391 aa	Predicted RBP	13.72	□□□□□ -0.21
NEDD4L-238	ENST00000635997	E2F1	Q01094	437 aa		13.72	□□□□□ -0.21
NEDD4L-238	ENST00000635997	HTR4	Q13639	388 aa		13.72	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms