RNA–Protein interactions for RNA: ENST00000628881.1

PFDN5-220, Transcript of prefoldin subunit 5, humanhuman

TSL 3 BASIC

Gene PFDN5, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-220ENST00000628881 FRMD7Q6ZUT3 714 aa12.85□□□□□ -0.35
PFDN5-220ENST00000628881 ASB18Q6ZVZ8 466 aa12.85□□□□□ -0.35
PFDN5-220ENST00000628881 C10orf107Q8IVU9 208 aa12.85□□□□□ -0.35
PFDN5-220ENST00000628881 PARP9Q8IXQ6 854 aa12.85□□□□□ -0.35
PFDN5-220ENST00000628881 KBTBD2Q8IY47 623 aa12.85□□□□□ -0.35
PFDN5-220ENST00000628881 ZCCHC7Q8N3Z6 543 aaKnown RBP12.85□□□□□ -0.35
PFDN5-220ENST00000628881 CDYL2Q8N8U2 506 aa12.85□□□□□ -0.35
PFDN5-220ENST00000628881 FAM47BQ8NA70 645 aa12.85□□□□□ -0.35
PFDN5-220ENST00000628881 TCP10LQ8TDR4 215 aa12.85□□□□□ -0.35
PFDN5-220ENST00000628881 AGAP11Q8TF27 550 aa12.85□□□□□ -0.35
PFDN5-220ENST00000628881 SELENOMQ8WWX9 145 aa12.85□□□□□ -0.35
PFDN5-220ENST00000628881 PTCHD1Q96NR3 888 aa12.85□□□□□ -0.35
PFDN5-220ENST00000628881 FAM111AQ96PZ2 611 aa12.85□□□□□ -0.35
PFDN5-220ENST00000628881 SMAD5Q99717 465 aaKnown RBP12.85□□□□□ -0.35
PFDN5-220ENST00000628881 SORBS1Q9BX66 1292 aaKnown RBP12.85□□□□□ -0.35
PFDN5-220ENST00000628881 ZNF717Q9BY31 904 aaPredicted RBP12.85□□□□□ -0.35
PFDN5-220ENST00000628881 LHPPQ9H008 270 aa12.85□□□□□ -0.35
PFDN5-220ENST00000628881 RRAGDQ9NQL2 400 aaPredicted RBP12.85□□□□□ -0.35
PFDN5-220ENST00000628881 KCMF1Q9P0J7 381 aa12.85□□□□□ -0.35
PFDN5-220ENST00000628881 SLC17A7Q9P2U7 560 aa12.85□□□□□ -0.35
PFDN5-220ENST00000628881 ZNF451Q9Y4E5 1061 aa12.85□□□□□ -0.35
PFDN5-220ENST00000628881 SPACA6W5XKT8 324 aa12.85□□□□□ -0.35
PFDN5-220ENST00000628881 BOD1L1Q8NFC6 3051 aa12.85□□□□□ -0.35
PFDN5-220ENST00000628881 PIEZO2Q9H5I5 2752 aa12.84□□□□□ -0.35
PFDN5-220ENST00000628881 IGKV3D-11A0A0A0MRZ8 115 aa12.84□□□□□ -0.35
PFDN5-220ENST00000628881 IGHV3-20A0A0C4DH32 117 aa12.84□□□□□ -0.35
PFDN5-220ENST00000628881 CYR61O00622 381 aa12.84□□□□□ -0.35
PFDN5-220ENST00000628881 CLDN4O14493 209 aa12.84□□□□□ -0.35
PFDN5-220ENST00000628881 TYROBPO43914 113 aa12.84□□□□□ -0.35
PFDN5-220ENST00000628881 SEC24DO94855 1032 aaPredicted RBP12.84□□□□□ -0.35
PFDN5-220ENST00000628881 ESRRBO95718 433 aa12.84□□□□□ -0.35
PFDN5-220ENST00000628881 PDYNP01213 254 aa12.84□□□□□ -0.35
PFDN5-220ENST00000628881 KRT6AP02538 564 aa12.84□□□□□ -0.35
PFDN5-220ENST00000628881 KRT6BP04259 564 aa12.84□□□□□ -0.35
PFDN5-220ENST00000628881 ALPPP05187 535 aa12.84□□□□□ -0.35
PFDN5-220ENST00000628881 ENO1P06733 434 aaKnown RBP12.84□□□□□ -0.35
PFDN5-220ENST00000628881 HMOX2P30519 316 aa12.84□□□□□ -0.35
PFDN5-220ENST00000628881 KRT6CP48668 564 aa12.84□□□□□ -0.35
PFDN5-220ENST00000628881 HSD17B7P56937 341 aa12.84□□□□□ -0.35
PFDN5-220ENST00000628881 AP2B1P63010 937 aa12.84□□□□□ -0.35
PFDN5-220ENST00000628881 BTG2P78543 158 aa12.84□□□□□ -0.35
PFDN5-220ENST00000628881 ASPHQ12797 758 aa12.84□□□□□ -0.35
PFDN5-220ENST00000628881 SFT2D3Q587I9 215 aa12.84□□□□□ -0.35
PFDN5-220ENST00000628881 SGO1Q5FBB7 561 aa12.84□□□□□ -0.35
PFDN5-220ENST00000628881 TNFAIP8L3Q5GJ75 292 aa12.84□□□□□ -0.35
PFDN5-220ENST00000628881 NUDT13Q86X67 352 aa12.84□□□□□ -0.35
PFDN5-220ENST00000628881 HPS6Q86YV9 775 aa12.84□□□□□ -0.35
PFDN5-220ENST00000628881 SCUBE1Q8IWY4 988 aa12.84□□□□□ -0.35
PFDN5-220ENST00000628881 ZNF595Q8IYB9 648 aa12.84□□□□□ -0.35
PFDN5-220ENST00000628881 TMEM52Q8NDY8 209 aa12.84□□□□□ -0.35
PFDN5-220ENST00000628881 METTL6Q8TCB7 284 aa12.84□□□□□ -0.35
PFDN5-220ENST00000628881 THOC3Q96J01 351 aaKnown RBP12.84□□□□□ -0.35
PFDN5-220ENST00000628881 IMMP1LQ96LU5 166 aa12.84□□□□□ -0.35
PFDN5-220ENST00000628881 CSF3RQ99062 836 aa12.84□□□□□ -0.35
PFDN5-220ENST00000628881 MAPKAP1Q9BPZ7 522 aa12.84□□□□□ -0.35
PFDN5-220ENST00000628881 WDR77Q9BQA1 342 aaPredicted RBP12.84□□□□□ -0.35
PFDN5-220ENST00000628881 ZNF552Q9H707 407 aaPredicted RBP12.84□□□□□ -0.35
PFDN5-220ENST00000628881 DDX31Q9H8H2 851 aaKnown RBP12.84□□□□□ -0.35
PFDN5-220ENST00000628881 BRF2Q9HAW0 419 aa12.84□□□□□ -0.35
PFDN5-220ENST00000628881 SSU72Q9NP77 194 aaKnown RBP12.84□□□□□ -0.35
PFDN5-220ENST00000628881 MID1IP1Q9NPA3 183 aa12.84□□□□□ -0.35
PFDN5-220ENST00000628881 PRTFDC1Q9NRG1 225 aa12.84□□□□□ -0.35
PFDN5-220ENST00000628881 FARSBQ9NSD9 589 aaKnown RBP12.84□□□□□ -0.35
PFDN5-220ENST00000628881 C5AR2Q9P296 337 aa12.84□□□□□ -0.35
PFDN5-220ENST00000628881 SCN2AQ99250 2005 aa12.84□□□□□ -0.35
PFDN5-220ENST00000628881 ATRXP46100 2492 aa12.83□□□□□ -0.36
PFDN5-220ENST00000628881 A0A0A6YYD5 115 aa12.83□□□□□ -0.36
PFDN5-220ENST00000628881 TCRBV16S1A1N1A0A5B0 115 aa12.83□□□□□ -0.36
PFDN5-220ENST00000628881 BLACEA4D250 179 aa12.83□□□□□ -0.36
PFDN5-220ENST00000628881 SYNDIG1LA6NDD5 238 aa12.83□□□□□ -0.36
PFDN5-220ENST00000628881 MANBAO00462 879 aa12.83□□□□□ -0.36
PFDN5-220ENST00000628881 UBFD1O14562 309 aaKnown RBP12.83□□□□□ -0.36
PFDN5-220ENST00000628881 TRIM13O60858 407 aa12.83□□□□□ -0.36
PFDN5-220ENST00000628881 SERPINA7P05543 415 aa12.83□□□□□ -0.36
PFDN5-220ENST00000628881 PRR35P0CG20 571 aa12.83□□□□□ -0.36
PFDN5-220ENST00000628881 ICAM2P13598 275 aa12.83□□□□□ -0.36
PFDN5-220ENST00000628881 HSD3B1P14060 373 aa12.83□□□□□ -0.36
PFDN5-220ENST00000628881 MAOAP21397 527 aa12.83□□□□□ -0.36
PFDN5-220ENST00000628881 HSD3B2P26439 372 aa12.83□□□□□ -0.36
PFDN5-220ENST00000628881 BSGP35613 385 aa12.83□□□□□ -0.36
PFDN5-220ENST00000628881 HNRNPFP52597 415 aaKnown RBP12.83□□□□□ -0.36
PFDN5-220ENST00000628881 OR4D2P58180 307 aa12.83□□□□□ -0.36
PFDN5-220ENST00000628881 ZNF33BQ06732 778 aa12.83□□□□□ -0.36
PFDN5-220ENST00000628881 ACTN3Q08043 901 aaPredicted RBP12.83□□□□□ -0.36
PFDN5-220ENST00000628881 C19orf57Q0VDD7 668 aa12.83□□□□□ -0.36
PFDN5-220ENST00000628881 SLAMF1Q13291 335 aa12.83□□□□□ -0.36
PFDN5-220ENST00000628881 TCHHL1Q5QJ38 904 aaPredicted RBP12.83□□□□□ -0.36
PFDN5-220ENST00000628881 FAM219BQ5XKK7 198 aa12.83□□□□□ -0.36
PFDN5-220ENST00000628881 PLAG1Q6DJT9 500 aa12.83□□□□□ -0.36
PFDN5-220ENST00000628881 PAPD4Q6PIY7 484 aaKnown RBP12.83□□□□□ -0.36
PFDN5-220ENST00000628881 RIPOR1Q6ZS17 1223 aa12.83□□□□□ -0.36
PFDN5-220ENST00000628881 EXOC3L1Q86VI1 746 aa12.83□□□□□ -0.36
PFDN5-220ENST00000628881 PTRH1Q86Y79 214 aaKnown RBP12.83□□□□□ -0.36
PFDN5-220ENST00000628881 EFCAB3Q8N7B9 438 aa12.83□□□□□ -0.36
PFDN5-220ENST00000628881 PGM2Q96G03 612 aa12.83□□□□□ -0.36
PFDN5-220ENST00000628881 LPAR4Q99677 370 aa12.83□□□□□ -0.36
PFDN5-220ENST00000628881 CENPHQ9H3R5 247 aa12.83□□□□□ -0.36
PFDN5-220ENST00000628881 NECTIN3Q9NQS3 549 aa12.83□□□□□ -0.36
PFDN5-220ENST00000628881 LYARQ9NX58 379 aaKnown RBP12.83□□□□□ -0.36
PFDN5-220ENST00000628881 MS4A12Q9NXJ0 267 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms