RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 LOC102723996A0A087X1L8 192 aa19.11■□□□□ 0.65
PTCD3-220ENST00000627371 A0A0A6YYD5 115 aa19.11■□□□□ 0.65
PTCD3-220ENST00000627371 A0A1W2PQ72 361 aa19.11■□□□□ 0.65
PTCD3-220ENST00000627371 WDR91A4D1P6 747 aa19.11■□□□□ 0.65
PTCD3-220ENST00000627371 OR2W5A6NFC9 320 aa19.11■□□□□ 0.65
PTCD3-220ENST00000627371 FAM227AF5H4B4 570 aa19.11■□□□□ 0.65
PTCD3-220ENST00000627371 B4GALT2O60909 372 aa19.11■□□□□ 0.65
PTCD3-220ENST00000627371 SASH3O75995 380 aa19.11■□□□□ 0.65
PTCD3-220ENST00000627371 UROSP10746 265 aa19.11■□□□□ 0.65
PTCD3-220ENST00000627371 ACPPP15309 386 aa19.11■□□□□ 0.65
PTCD3-220ENST00000627371 RRADP55042 308 aa19.11■□□□□ 0.65
PTCD3-220ENST00000627371 ABRAXAS2Q15018 415 aa19.11■□□□□ 0.65
PTCD3-220ENST00000627371 ARL13AQ5H913 290 aaPredicted RBP19.11■□□□□ 0.65
PTCD3-220ENST00000627371 CPZQ66K79 652 aa19.11■□□□□ 0.65
PTCD3-220ENST00000627371 FAAH2Q6GMR7 532 aa19.11■□□□□ 0.65
PTCD3-220ENST00000627371 METTL4Q8N3J2 472 aa19.11■□□□□ 0.65
PTCD3-220ENST00000627371 OR11G2Q8NGC1 345 aa19.11■□□□□ 0.65
PTCD3-220ENST00000627371 PPP1R14CQ8TAE6 165 aa19.11■□□□□ 0.65
PTCD3-220ENST00000627371 METTL21AQ8WXB1 218 aa19.11■□□□□ 0.65
PTCD3-220ENST00000627371 C8orf44Q96CB5 159 aa19.11■□□□□ 0.65
PTCD3-220ENST00000627371 MAPKAP1Q9BPZ7 522 aa19.11■□□□□ 0.65
PTCD3-220ENST00000627371 MESP1Q9BRJ9 268 aa19.11■□□□□ 0.65
PTCD3-220ENST00000627371 MRPL1Q9BYD6 325 aaKnown RBP19.11■□□□□ 0.65
PTCD3-220ENST00000627371 ACPTQ9BZG2 426 aa19.11■□□□□ 0.65
PTCD3-220ENST00000627371 ING2Q9H160 280 aa19.11■□□□□ 0.65
PTCD3-220ENST00000627371 MLXIPLQ9NP71 852 aa19.11■□□□□ 0.65
PTCD3-220ENST00000627371 KCMF1Q9P0J7 381 aa19.11■□□□□ 0.65
PTCD3-220ENST00000627371 FBXL4Q9UKA2 621 aa19.11■□□□□ 0.65
PTCD3-220ENST00000627371 ADAM29Q9UKF5 820 aa19.11■□□□□ 0.65
PTCD3-220ENST00000627371 MRPS33Q9Y291 106 aaKnown RBP19.11■□□□□ 0.65
PTCD3-220ENST00000627371 SPACA6W5XKT8 324 aa19.11■□□□□ 0.65
PTCD3-220ENST00000627371 ZFYVE26Q68DK2 2539 aa19.11■□□□□ 0.65
PTCD3-220ENST00000627371 CYR61O00622 381 aa19.1■□□□□ 0.65
PTCD3-220ENST00000627371 AZIN1O14977 448 aa19.1■□□□□ 0.65
PTCD3-220ENST00000627371 EEDO75530 441 aaKnown RBP19.1■□□□□ 0.65
PTCD3-220ENST00000627371 SERPINE1P05121 402 aa19.1■□□□□ 0.65
PTCD3-220ENST00000627371 ARRB2P32121 409 aa19.1■□□□□ 0.65
PTCD3-220ENST00000627371 SLAMF1Q13291 335 aa19.1■□□□□ 0.65
PTCD3-220ENST00000627371 CHI3L2Q15782 390 aa19.1■□□□□ 0.65
PTCD3-220ENST00000627371 TTMPQ5BVD1 217 aa19.1■□□□□ 0.65
PTCD3-220ENST00000627371 DCAF10Q5QP82 559 aa19.1■□□□□ 0.65
PTCD3-220ENST00000627371 HHATQ5VTY9 493 aa19.1■□□□□ 0.65
PTCD3-220ENST00000627371 CLEC6AQ6EIG7 209 aa19.1■□□□□ 0.65
PTCD3-220ENST00000627371 HOMEZQ8IX15 550 aa19.1■□□□□ 0.65
PTCD3-220ENST00000627371 GOLGA6L1Q8N7Z2 621 aa19.1■□□□□ 0.65
PTCD3-220ENST00000627371 FAM47BQ8NA70 645 aa19.1■□□□□ 0.65
PTCD3-220ENST00000627371 UBL7Q96S82 380 aaPredicted RBP19.1■□□□□ 0.65
PTCD3-220ENST00000627371 CSF3RQ99062 836 aa19.1■□□□□ 0.65
PTCD3-220ENST00000627371 LYARQ9NX58 379 aaKnown RBP19.1■□□□□ 0.65
PTCD3-220ENST00000627371 NKIRAS1Q9NYS0 192 aa19.1■□□□□ 0.65
PTCD3-220ENST00000627371 VPS29Q9UBQ0 182 aa19.1■□□□□ 0.65
PTCD3-220ENST00000627371 C19orf25Q9UFG5 118 aaPredicted RBP19.1■□□□□ 0.65
PTCD3-220ENST00000627371 MMACHCQ9Y4U1 282 aa19.1■□□□□ 0.65
PTCD3-220ENST00000627371 FAM208BQ5VWN6 2430 aa19.1■□□□□ 0.65
PTCD3-220ENST00000627371 TMPRSS11DO60235 418 aa19.09■□□□□ 0.65
PTCD3-220ENST00000627371 PRMT3O60678 531 aa19.09■□□□□ 0.65
PTCD3-220ENST00000627371 FGF4P08620 206 aa19.09■□□□□ 0.65
PTCD3-220ENST00000627371 COX6A1P12074 109 aa19.09■□□□□ 0.65
PTCD3-220ENST00000627371 CHN1P15882 459 aa19.09■□□□□ 0.65
PTCD3-220ENST00000627371 SERPINB3P29508 390 aa19.09■□□□□ 0.65
PTCD3-220ENST00000627371 HNRNPFP52597 415 aaKnown RBP19.09■□□□□ 0.65
PTCD3-220ENST00000627371 POLE2P56282 527 aa19.09■□□□□ 0.65
PTCD3-220ENST00000627371 WDR4P57081 412 aaKnown RBP19.09■□□□□ 0.65
PTCD3-220ENST00000627371 BTG2P78543 158 aa19.09■□□□□ 0.65
PTCD3-220ENST00000627371 TBL3Q12788 808 aaKnown RBP19.09■□□□□ 0.65
PTCD3-220ENST00000627371 CHAF1BQ13112 559 aa19.09■□□□□ 0.65
PTCD3-220ENST00000627371 NSDHLQ15738 373 aa19.09■□□□□ 0.65
PTCD3-220ENST00000627371 KANK2Q63ZY3 851 aa19.09■□□□□ 0.65
PTCD3-220ENST00000627371 MRM1Q6IN84 353 aaKnown RBP19.09■□□□□ 0.65
PTCD3-220ENST00000627371 CYP20A1Q6UW02 462 aa19.09■□□□□ 0.65
PTCD3-220ENST00000627371 LANCL3Q6ZV70 420 aa19.09■□□□□ 0.65
PTCD3-220ENST00000627371 PAGE2Q7Z2X7 111 aa19.09■□□□□ 0.65
PTCD3-220ENST00000627371 COMMD6Q7Z4G1 85 aa19.09■□□□□ 0.65
PTCD3-220ENST00000627371 ZNF595Q8IYB9 648 aa19.09■□□□□ 0.65
PTCD3-220ENST00000627371 TMEM52Q8NDY8 209 aa19.09■□□□□ 0.65
PTCD3-220ENST00000627371 TSLPQ969D9 159 aa19.09■□□□□ 0.65
PTCD3-220ENST00000627371 WBP1Q96G27 269 aa19.09■□□□□ 0.65
PTCD3-220ENST00000627371 PTCHD1Q96NR3 888 aa19.09■□□□□ 0.65
PTCD3-220ENST00000627371 PAIP2Q9BPZ3 127 aaKnown RBP19.09■□□□□ 0.65
PTCD3-220ENST00000627371 ARHGAP9Q9BRR9 750 aa19.09■□□□□ 0.65
PTCD3-220ENST00000627371 TRIM55Q9BYV6 548 aa19.09■□□□□ 0.65
PTCD3-220ENST00000627371 PRDM9Q9NQV7 894 aa19.09■□□□□ 0.65
PTCD3-220ENST00000627371 MS4A12Q9NXJ0 267 aa19.09■□□□□ 0.65
PTCD3-220ENST00000627371 PHF11Q9UIL8 331 aa19.09■□□□□ 0.65
PTCD3-220ENST00000627371 FBXW2Q9UKT8 454 aa19.09■□□□□ 0.65
PTCD3-220ENST00000627371 IGSF10Q6WRI0 2623 aa19.09■□□□□ 0.65
PTCD3-220ENST00000627371 IGKV3D-11A0A0A0MRZ8 115 aa19.08■□□□□ 0.64
PTCD3-220ENST00000627371 IGHV1-45A0A0A0MS14 117 aa19.08■□□□□ 0.64
PTCD3-220ENST00000627371 BLACEA4D250 179 aa19.08■□□□□ 0.64
PTCD3-220ENST00000627371 TMEM114B3SHH9 223 aa19.08■□□□□ 0.64
PTCD3-220ENST00000627371 CLDN4O14493 209 aa19.08■□□□□ 0.64
PTCD3-220ENST00000627371 HPP00738 406 aa19.08■□□□□ 0.64
PTCD3-220ENST00000627371 CPN2P22792 545 aa19.08■□□□□ 0.64
PTCD3-220ENST00000627371 GRK2P25098 689 aa19.08■□□□□ 0.64
PTCD3-220ENST00000627371 TPP2P29144 1249 aaPredicted RBP19.08■□□□□ 0.64
PTCD3-220ENST00000627371 HNRNPH2P55795 449 aaKnown RBP19.08■□□□□ 0.64
PTCD3-220ENST00000627371 HSD17B7P56937 341 aa19.08■□□□□ 0.64
PTCD3-220ENST00000627371 HMGCS1Q01581 520 aa19.08■□□□□ 0.64
PTCD3-220ENST00000627371 EEF1A2Q05639 463 aaKnown RBP19.08■□□□□ 0.64
PTCD3-220ENST00000627371 CES4AQ5XG92 561 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms