RNA–Protein interactions for RNA: ENST00000627282.2

CNOT9-209, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 2 BASIC

Gene CNOT9, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-209ENST00000627282 IL11RAQ14626 422 aa18.17■□□□□ 0.5
CNOT9-209ENST00000627282 COL28A1Q2UY09 1125 aa18.17■□□□□ 0.5
CNOT9-209ENST00000627282 HIPK4Q8NE63 616 aa18.17■□□□□ 0.5
CNOT9-209ENST00000627282 NRG4Q8WWG1 115 aa18.17■□□□□ 0.5
CNOT9-209ENST00000627282 LRRC58Q96CX6 371 aa18.17■□□□□ 0.5
CNOT9-209ENST00000627282 TAAR9Q96RI9 348 aa18.17■□□□□ 0.5
CNOT9-209ENST00000627282 AIF1LQ9BQI0 150 aa18.17■□□□□ 0.5
CNOT9-209ENST00000627282 ABCD2Q9UBJ2 740 aa18.17■□□□□ 0.5
CNOT9-209ENST00000627282 RARRES3Q9UL19 164 aa18.17■□□□□ 0.5
CNOT9-209ENST00000627282 LRRC42Q9Y546 428 aa18.17■□□□□ 0.5
CNOT9-209ENST00000627282 PTPRQQ9UMZ3 2332 aa18.17■□□□□ 0.5
CNOT9-209ENST00000627282 TRBC2A0A5B9 178 aa18.16■□□□□ 0.5
CNOT9-209ENST00000627282 H0YGG7 62 aa18.16■□□□□ 0.5
CNOT9-209ENST00000627282 FXYD1O00168 92 aa18.16■□□□□ 0.5
CNOT9-209ENST00000627282 SEC22BO75396 215 aa18.16■□□□□ 0.5
CNOT9-209ENST00000627282 RSL1D1O76021 490 aaKnown RBP18.16■□□□□ 0.5
CNOT9-209ENST00000627282 SLC7A2P52569 658 aa18.16■□□□□ 0.5
CNOT9-209ENST00000627282 VSX2P58304 361 aaPredicted RBP18.16■□□□□ 0.5
CNOT9-209ENST00000627282 ARF3P61204 181 aaPredicted RBP18.16■□□□□ 0.5
CNOT9-209ENST00000627282 RPS15AP62244 130 aaKnown RBP18.16■□□□□ 0.5
CNOT9-209ENST00000627282 SWT1Q5T5J6 900 aaKnown RBP18.16■□□□□ 0.5
CNOT9-209ENST00000627282 PRAMEF17Q5VTA0 474 aa18.16■□□□□ 0.5
CNOT9-209ENST00000627282 VN1R4Q7Z5H5 301 aa18.16■□□□□ 0.5
CNOT9-209ENST00000627282 PPP1R3BQ86XI6 285 aa18.16■□□□□ 0.5
CNOT9-209ENST00000627282 VPS33AQ96AX1 596 aa18.16■□□□□ 0.5
CNOT9-209ENST00000627282 RNF31Q96EP0 1072 aa18.16■□□□□ 0.5
CNOT9-209ENST00000627282 DDA1Q9BW61 102 aa18.16■□□□□ 0.5
CNOT9-209ENST00000627282 SPRTNQ9H040 489 aaPredicted RBP18.16■□□□□ 0.5
CNOT9-209ENST00000627282 FANCEQ9HB96 536 aa18.16■□□□□ 0.5
CNOT9-209ENST00000627282 LHX6Q9UPM6 363 aa18.16■□□□□ 0.5
CNOT9-209ENST00000627282 PCDHGA4Q9Y5G9 962 aa18.16■□□□□ 0.5
CNOT9-209ENST00000627282 PCDHGA3Q9Y5H0 932 aa18.16■□□□□ 0.5
CNOT9-209ENST00000627282 PRORSD1PA6NEY8 169 aa18.16■□□□□ 0.5
CNOT9-209ENST00000627282 NVLO15381 856 aaKnown RBP18.16■□□□□ 0.5
CNOT9-209ENST00000627282 OR1F1O43749 312 aa18.16■□□□□ 0.5
CNOT9-209ENST00000627282 BAG2O95816 211 aa18.16■□□□□ 0.5
CNOT9-209ENST00000627282 NPPAP01160 153 aa18.16■□□□□ 0.5
CNOT9-209ENST00000627282 PCSK2P16519 638 aa18.16■□□□□ 0.5
CNOT9-209ENST00000627282 SLC5A2P31639 672 aa18.16■□□□□ 0.5
CNOT9-209ENST00000627282 MSX2P35548 267 aaPredicted RBP18.16■□□□□ 0.5
CNOT9-209ENST00000627282 GRK3P35626 688 aa18.16■□□□□ 0.5
CNOT9-209ENST00000627282 ITGA1P56199 1179 aa18.16■□□□□ 0.5
CNOT9-209ENST00000627282 TLE3Q04726 772 aa18.16■□□□□ 0.5
CNOT9-209ENST00000627282 KIAA0040Q15053 153 aa18.16■□□□□ 0.5
CNOT9-209ENST00000627282 SPATS1Q496A3 300 aa18.16■□□□□ 0.5
CNOT9-209ENST00000627282 PAGE3Q5JUK9 113 aa18.16■□□□□ 0.5
CNOT9-209ENST00000627282 DCAF12Q5T6F0 453 aa18.16■□□□□ 0.5
CNOT9-209ENST00000627282 FRG2Q64ET8 278 aa18.16■□□□□ 0.5
CNOT9-209ENST00000627282 PWWP2BQ6NUJ5 590 aa18.16■□□□□ 0.5
CNOT9-209ENST00000627282 SPACA3Q8IXA5 215 aa18.16■□□□□ 0.5
CNOT9-209ENST00000627282 ANKRD53Q8N9V6 530 aa18.16■□□□□ 0.5
CNOT9-209ENST00000627282 MFSD9Q8NBP5 474 aa18.16■□□□□ 0.5
CNOT9-209ENST00000627282 OR8K5Q8NH50 307 aa18.16■□□□□ 0.5
CNOT9-209ENST00000627282 KCNE4Q8WWG9 221 aa18.16■□□□□ 0.5
CNOT9-209ENST00000627282 N4BP2L2Q92802 583 aaPredicted RBP18.16■□□□□ 0.5
CNOT9-209ENST00000627282 CMTM7Q96FZ5 175 aa18.16■□□□□ 0.5
CNOT9-209ENST00000627282 NAF1Q96HR8 494 aaKnown RBP18.16■□□□□ 0.5
CNOT9-209ENST00000627282 FRG2BQ96QU4 278 aa18.16■□□□□ 0.5
CNOT9-209ENST00000627282 EFCAB11Q9BUY7 163 aa18.16■□□□□ 0.5
CNOT9-209ENST00000627282 IL1RL2Q9HB29 575 aa18.16■□□□□ 0.5
CNOT9-209ENST00000627282 ENAMQ9NRM1 1142 aa18.16■□□□□ 0.5
CNOT9-209ENST00000627282 STARD5Q9NSY2 213 aa18.16■□□□□ 0.5
CNOT9-209ENST00000627282 FOXJ2Q9P0K8 574 aa18.16■□□□□ 0.5
CNOT9-209ENST00000627282 P2RX6O15547 441 aa18.15■□□□□ 0.5
CNOT9-209ENST00000627282 SRPX2O60687 465 aaPredicted RBP18.15■□□□□ 0.5
CNOT9-209ENST00000627282 OR2B3O76000 313 aa18.15■□□□□ 0.5
CNOT9-209ENST00000627282 STATHP02808 62 aa18.15■□□□□ 0.5
CNOT9-209ENST00000627282 HNF4AP41235 474 aa18.15■□□□□ 0.5
CNOT9-209ENST00000627282 NFYCQ13952 458 aa18.15■□□□□ 0.5
CNOT9-209ENST00000627282 COL9A2Q14055 689 aaPredicted RBP18.15■□□□□ 0.5
CNOT9-209ENST00000627282 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.15■□□□□ 0.5
CNOT9-209ENST00000627282 ADNP2Q6IQ32 1131 aa18.15■□□□□ 0.5
CNOT9-209ENST00000627282 GRHL2Q6ISB3 625 aa18.15■□□□□ 0.5
CNOT9-209ENST00000627282 ZFP1Q6P2D0 407 aa18.15■□□□□ 0.5
CNOT9-209ENST00000627282 CEACAM20Q6UY09 585 aa18.15■□□□□ 0.5
CNOT9-209ENST00000627282 BPHLQ86WA6 291 aaPredicted RBP18.15■□□□□ 0.5
CNOT9-209ENST00000627282 LIX1Q8N485 282 aa18.15■□□□□ 0.5
CNOT9-209ENST00000627282 DPP10Q8N608 796 aa18.15■□□□□ 0.5
CNOT9-209ENST00000627282 GLB1L3Q8NCI6 653 aaPredicted RBP18.15■□□□□ 0.5
CNOT9-209ENST00000627282 ZBTB18Q99592 522 aa18.15■□□□□ 0.5
CNOT9-209ENST00000627282 SLC39A3Q9BRY0 314 aa18.15■□□□□ 0.5
CNOT9-209ENST00000627282 DPH1Q9BZG8 443 aa18.15■□□□□ 0.5
CNOT9-209ENST00000627282 SERTAD3Q9UJW9 196 aa18.15■□□□□ 0.5
CNOT9-209ENST00000627282 ACSL6Q9UKU0 697 aa18.15■□□□□ 0.5
CNOT9-209ENST00000627282 IGSF10Q6WRI0 2623 aa18.14■□□□□ 0.5
CNOT9-209ENST00000627282 H3BNX3 289 aa18.14■□□□□ 0.49
CNOT9-209ENST00000627282 EIF2S1P05198 315 aaKnown RBP18.14■□□□□ 0.49
CNOT9-209ENST00000627282 PRPS2P11908 318 aa18.14■□□□□ 0.49
CNOT9-209ENST00000627282 ZNF28P17035 718 aa18.14■□□□□ 0.49
CNOT9-209ENST00000627282 TCN1P20061 433 aaPredicted RBP18.14■□□□□ 0.49
CNOT9-209ENST00000627282 SLC6A2P23975 617 aa18.14■□□□□ 0.49
CNOT9-209ENST00000627282 CXCR2P25025 360 aa18.14■□□□□ 0.49
CNOT9-209ENST00000627282 NEK2P51955 445 aa18.14■□□□□ 0.49
CNOT9-209ENST00000627282 CSTF3Q12996 717 aaKnown RBP18.14■□□□□ 0.49
CNOT9-209ENST00000627282 RBBP5Q15291 538 aaKnown RBP18.14■□□□□ 0.49
CNOT9-209ENST00000627282 TIGD2Q4W5G0 525 aa18.14■□□□□ 0.49
CNOT9-209ENST00000627282 TMIGD1Q6UXZ0 262 aa18.14■□□□□ 0.49
CNOT9-209ENST00000627282 SLC15A3Q8IY34 581 aa18.14■□□□□ 0.49
CNOT9-209ENST00000627282 FAM156AQ8NDB6 213 aa18.14■□□□□ 0.49
CNOT9-209ENST00000627282 BHLHE22Q8NFJ8 381 aaPredicted RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms