RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 OR4E2Q8NGC2 313 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 ZFPM2Q8WW38 1151 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 MS4A6EQ96DS6 147 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 NEURL3Q96EH8 262 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 ZBED6CLQ96FA7 236 aaPredicted RBP20.99■□□□□ 0.95
PNKP-220ENST00000627232 FAIM2Q9BWQ8 316 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 SRMSQ9H3Y6 488 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 C3orf18Q9UK00 162 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 ACSL6Q9UKU0 697 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 PNMA8BQ9ULN7 279 aaPredicted RBP20.99■□□□□ 0.95
PNKP-220ENST00000627232 DMTF1Q9Y222 760 aa20.99■□□□□ 0.95
PNKP-220ENST00000627232 SNRNP200O75643 2136 aaKnown RBP20.98■□□□□ 0.95
PNKP-220ENST00000627232 GUCY1B2O75343 617 aa20.98■□□□□ 0.95
PNKP-220ENST00000627232 NELFEP18615 380 aaKnown RBP20.98■□□□□ 0.95
PNKP-220ENST00000627232 FPR1P21462 350 aa20.98■□□□□ 0.95
PNKP-220ENST00000627232 DNAJA1P31689 397 aaKnown RBP20.98■□□□□ 0.95
PNKP-220ENST00000627232 NUDT1P36639 197 aa20.98■□□□□ 0.95
PNKP-220ENST00000627232 SLC19A1P41440 591 aa20.98■□□□□ 0.95
PNKP-220ENST00000627232 PLA2G16P53816 162 aa20.98■□□□□ 0.95
PNKP-220ENST00000627232 SELENOWP63302 87 aa20.98■□□□□ 0.95
PNKP-220ENST00000627232 KCNJ10P78508 379 aa20.98■□□□□ 0.95
PNKP-220ENST00000627232 VLDLRP98155 873 aa20.98■□□□□ 0.95
PNKP-220ENST00000627232 TFF2Q03403 129 aa20.98■□□□□ 0.95
PNKP-220ENST00000627232 KIR2DS3Q14952 304 aa20.98■□□□□ 0.95
PNKP-220ENST00000627232 PAQR7Q86WK9 346 aa20.98■□□□□ 0.95
PNKP-220ENST00000627232 FAM20CQ8IXL6 584 aa20.98■□□□□ 0.95
PNKP-220ENST00000627232 ARL10Q8N8L6 244 aa20.98■□□□□ 0.95
PNKP-220ENST00000627232 OR2L5Q8NG80 312 aa20.98■□□□□ 0.95
PNKP-220ENST00000627232 CCL4L1Q8NHW4 92 aa20.98■□□□□ 0.95
PNKP-220ENST00000627232 PSMA8Q8TAA3 256 aa20.98■□□□□ 0.95
PNKP-220ENST00000627232 KCNC2Q96PR1 638 aa20.98■□□□□ 0.95
PNKP-220ENST00000627232 C17orf62Q9BQA9 187 aa20.98■□□□□ 0.95
PNKP-220ENST00000627232 YIPF3Q9GZM5 350 aa20.98■□□□□ 0.95
PNKP-220ENST00000627232 TOR3AQ9H497 397 aa20.98■□□□□ 0.95
PNKP-220ENST00000627232 SLAMF7Q9NQ25 335 aa20.98■□□□□ 0.95
PNKP-220ENST00000627232 TEX10Q9NXF1 929 aaPredicted RBP20.98■□□□□ 0.95
PNKP-220ENST00000627232 VNN3Q9NY84 501 aa20.98■□□□□ 0.95
PNKP-220ENST00000627232 NDRG2Q9UN36 371 aaKnown RBP20.98■□□□□ 0.95
PNKP-220ENST00000627232 PADI2Q9Y2J8 665 aa20.98■□□□□ 0.95
PNKP-220ENST00000627232 BRWD1Q9NSI6 2320 aa20.98■□□□□ 0.95
PNKP-220ENST00000627232 CDH23Q9H251 3354 aa20.97■□□□□ 0.95
PNKP-220ENST00000627232 A0A1B0GTW7 788 aa20.97■□□□□ 0.95
PNKP-220ENST00000627232 BMP10O95393 424 aa20.97■□□□□ 0.95
PNKP-220ENST00000627232 TNFP01375 233 aa20.97■□□□□ 0.95
PNKP-220ENST00000627232 IFNA14P01570 189 aa20.97■□□□□ 0.95
PNKP-220ENST00000627232 IGHV4-34P06331 123 aa20.97■□□□□ 0.95
PNKP-220ENST00000627232 RAD23AP54725 363 aa20.97■□□□□ 0.95
PNKP-220ENST00000627232 DSTNP60981 165 aa20.97■□□□□ 0.95
PNKP-220ENST00000627232 RPS15AP62244 130 aaKnown RBP20.97■□□□□ 0.95
PNKP-220ENST00000627232 CDK6Q00534 326 aa20.97■□□□□ 0.95
PNKP-220ENST00000627232 ILF3Q12906 894 aaKnown RBP eCLIP20.97■□□□□ 0.95
PNKP-220ENST00000627232 SLC9A5Q14940 896 aa20.97■□□□□ 0.95
PNKP-220ENST00000627232 ZIK1Q3SY52 487 aaPredicted RBP20.97■□□□□ 0.95
PNKP-220ENST00000627232 CRB2Q5IJ48 1285 aa20.97■□□□□ 0.95
PNKP-220ENST00000627232 TOR1AIP1Q5JTV8 583 aa20.97■□□□□ 0.95
PNKP-220ENST00000627232 MRM1Q6IN84 353 aaKnown RBP20.97■□□□□ 0.95
PNKP-220ENST00000627232 ABHD17CQ6PCB6 329 aa20.97■□□□□ 0.95
PNKP-220ENST00000627232 ZNF793Q6ZN11 406 aa20.97■□□□□ 0.95
PNKP-220ENST00000627232 NRROSQ86YC3 692 aa20.97■□□□□ 0.95
PNKP-220ENST00000627232 HS3ST5Q8IZT8 346 aa20.97■□□□□ 0.95
PNKP-220ENST00000627232 METTL25Q8N6Q8 603 aa20.97■□□□□ 0.95
PNKP-220ENST00000627232 ZNF555Q8NEP9 628 aa20.97■□□□□ 0.95
PNKP-220ENST00000627232 OR5AK3PQ8NH89 298 aa20.97■□□□□ 0.95
PNKP-220ENST00000627232 TPD52L3Q96J77 140 aa20.97■□□□□ 0.95
PNKP-220ENST00000627232 C7orf34Q96L11 122 aa20.97■□□□□ 0.95
PNKP-220ENST00000627232 ABCG4Q9H172 646 aa20.97■□□□□ 0.95
PNKP-220ENST00000627232 KLHL31Q9H511 634 aa20.97■□□□□ 0.95
PNKP-220ENST00000627232 C6orf106Q9H6K1 298 aaPredicted RBP20.97■□□□□ 0.95
PNKP-220ENST00000627232 PRDM7Q9NQW5 492 aa20.97■□□□□ 0.95
PNKP-220ENST00000627232 FAM118AQ9NWS6 357 aa20.97■□□□□ 0.95
PNKP-220ENST00000627232 ANGPT4Q9Y264 503 aa20.97■□□□□ 0.95
PNKP-220ENST00000627232 MAP4K5Q9Y4K4 846 aa20.97■□□□□ 0.95
PNKP-220ENST00000627232 ORC6Q9Y5N6 252 aa20.97■□□□□ 0.95
PNKP-220ENST00000627232 LAMA3Q16787 3333 aa20.96■□□□□ 0.95
PNKP-220ENST00000627232 A0A087WXM4 84 aa20.96■□□□□ 0.95
PNKP-220ENST00000627232 TMEM229AB2RXF0 380 aa20.96■□□□□ 0.95
PNKP-220ENST00000627232 hCG_2039718K7EN88 272 aa20.96■□□□□ 0.95
PNKP-220ENST00000627232 BTN3A3O00478 584 aa20.96■□□□□ 0.95
PNKP-220ENST00000627232 CLIC3O95833 236 aa20.96■□□□□ 0.95
PNKP-220ENST00000627232 CD72P21854 359 aa20.96■□□□□ 0.95
PNKP-220ENST00000627232 TGM3Q08188 693 aa20.96■□□□□ 0.95
PNKP-220ENST00000627232 NADK2Q4G0N4 442 aa20.96■□□□□ 0.95
PNKP-220ENST00000627232 IQCCQ4KMZ1 466 aa20.96■□□□□ 0.95
PNKP-220ENST00000627232 BORAQ6PGQ7 559 aa20.96■□□□□ 0.95
PNKP-220ENST00000627232 DCP2Q8IU60 420 aaKnown RBP20.96■□□□□ 0.95
PNKP-220ENST00000627232 OFCC1Q8IZS5 231 aa20.96■□□□□ 0.95
PNKP-220ENST00000627232 AMER3Q8N944 861 aa20.96■□□□□ 0.95
PNKP-220ENST00000627232 NFKBIDQ8NI38 313 aa20.96■□□□□ 0.95
PNKP-220ENST00000627232 JPH3Q8WXH2 748 aaPredicted RBP20.96■□□□□ 0.95
PNKP-220ENST00000627232 LZICQ8WZA0 190 aa20.96■□□□□ 0.95
PNKP-220ENST00000627232 EXOSC8Q96B26 276 aaKnown RBP20.96■□□□□ 0.95
PNKP-220ENST00000627232 MBOAT4Q96T53 435 aa20.96■□□□□ 0.95
PNKP-220ENST00000627232 GRIP2Q9C0E4 1043 aa20.96■□□□□ 0.95
PNKP-220ENST00000627232 SOX17Q9H6I2 414 aaPredicted RBP20.96■□□□□ 0.95
PNKP-220ENST00000627232 UBE2ZQ9H832 354 aaPredicted RBP20.96■□□□□ 0.95
PNKP-220ENST00000627232 ZSCAN32Q9NX65 697 aa20.96■□□□□ 0.95
PNKP-220ENST00000627232 MDC1Q14676 2089 aaKnown RBP20.96■□□□□ 0.95
PNKP-220ENST00000627232 EME2A4GXA9 379 aaPredicted RBP20.95■□□□□ 0.94
PNKP-220ENST00000627232 CHURC1-FNTBB4DL54 471 aa20.95■□□□□ 0.94
PNKP-220ENST00000627232 ERI3O43414 337 aaKnown RBP20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms