RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045	RTP2	Q5QGT7	225 aa		13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	MACC1	Q6ZN28	852 aa		13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	CCDC149	Q6ZUS6	474 aa		13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	CHST9	Q7L1S5	443 aa		13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	LRRC70	Q7Z2Q7	622 aa		13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	C11orf65	Q8NCR3	313 aa		13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	DENND6B	Q8NEG7	585 aa		13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	FAM129B	Q96TA1	746 aa		13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	ZNF224	Q9NZL3	707 aa		13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	SSR3	Q9UNL2	185 aa		13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	PCDHB11	Q9Y5F2	797 aa		13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	TDRD15	B5MCY1	1934 aa	Known RBP	13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	GREB1	Q4ZG55	1949 aa		13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	YY2	O15391	372 aa		13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	SMAD6	O43541	496 aa	Known RBP	13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	C1QB	P02746	253 aa		13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	ZDHHC11B	P0C7U3	371 aa		13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	ENPP1	P22413	925 aa		13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	CCR7	P32248	378 aa		13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	NUDT1	P36639	197 aa		13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	AP2S1	P53680	142 aa	Predicted RBP	13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	WBP2	Q969T9	261 aa		13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	ZIC5	Q96T25	663 aa		13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	TCF25	Q9BQ70	676 aa		13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	DOHH	Q9BU89	302 aa		13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	HCST	Q9UBK5	93 aa		13.78	□□□□□ -0.2
SYNRG-231	ENST00000622045	PRRC2B	Q5JSZ5	2229 aa	Known RBP	13.77	□□□□□ -0.2
SYNRG-231	ENST00000622045	ZNF840P	A6NDX5	716 aa		13.77	□□□□□ -0.2
SYNRG-231	ENST00000622045	GAPDHS	O14556	408 aa	Predicted RBP	13.77	□□□□□ -0.2
SYNRG-231	ENST00000622045	ARHGEF15	O94989	841 aa		13.77	□□□□□ -0.2
SYNRG-231	ENST00000622045	OR56A5	P0C7T3	313 aa		13.77	□□□□□ -0.2
SYNRG-231	ENST00000622045	HLA-E	P13747	358 aa		13.77	□□□□□ -0.2
SYNRG-231	ENST00000622045	AP1S1	P61966	158 aa		13.77	□□□□□ -0.2
SYNRG-231	ENST00000622045	EIF4H	Q15056	248 aa	Known RBP	13.77	□□□□□ -0.2
SYNRG-231	ENST00000622045	SPHAR	Q15513	63 aa		13.77	□□□□□ -0.2
SYNRG-231	ENST00000622045	GLYR1	Q49A26	553 aa	Predicted RBP	13.77	□□□□□ -0.2
SYNRG-231	ENST00000622045	SLC51B	Q86UW2	128 aa		13.77	□□□□□ -0.2
SYNRG-231	ENST00000622045	NAGS	Q8N159	534 aa		13.77	□□□□□ -0.2
SYNRG-231	ENST00000622045	POFUT2	Q9Y2G5	429 aa		13.77	□□□□□ -0.2
SYNRG-231	ENST00000622045	PTPRD	P23468	1912 aa		13.77	□□□□□ -0.2
SYNRG-231	ENST00000622045	TMEM189-UBE2V1	I3L0A0	370 aa		13.77	□□□□□ -0.21
SYNRG-231	ENST00000622045	PCDH7	O60245	1069 aa		13.77	□□□□□ -0.21
SYNRG-231	ENST00000622045	FZD6	O60353	706 aa		13.77	□□□□□ -0.21
SYNRG-231	ENST00000622045	TNNI3	P19429	210 aa		13.77	□□□□□ -0.21
SYNRG-231	ENST00000622045	CRYBB2	P43320	205 aa		13.77	□□□□□ -0.21
SYNRG-231	ENST00000622045	INPP1	P49441	399 aa		13.77	□□□□□ -0.21
SYNRG-231	ENST00000622045	GPR33	Q49SQ1	333 aa		13.77	□□□□□ -0.21
SYNRG-231	ENST00000622045	RETSAT	Q6NUM9	610 aa		13.77	□□□□□ -0.21
SYNRG-231	ENST00000622045	FUT10	Q6P4F1	479 aa		13.77	□□□□□ -0.21
SYNRG-231	ENST00000622045	ESX1	Q8N693	406 aa		13.77	□□□□□ -0.21
SYNRG-231	ENST00000622045	SLC37A3	Q8NCC5	494 aa		13.77	□□□□□ -0.21
SYNRG-231	ENST00000622045	C9orf43	Q8TAL5	461 aa	Predicted RBP	13.77	□□□□□ -0.21
SYNRG-231	ENST00000622045	TTC9	Q92623	222 aa		13.77	□□□□□ -0.21
SYNRG-231	ENST00000622045	MED8	Q96G25	268 aa		13.77	□□□□□ -0.21
SYNRG-231	ENST00000622045	C17orf62	Q9BQA9	187 aa		13.77	□□□□□ -0.21
SYNRG-231	ENST00000622045	FAM120C	Q9NX05	1096 aa	Known RBP	13.77	□□□□□ -0.21
SYNRG-231	ENST00000622045	PLOD3	O60568	738 aa		13.77	□□□□□ -0.21
SYNRG-231	ENST00000622045	CS	O75390	466 aa	Known RBP	13.77	□□□□□ -0.21
SYNRG-231	ENST00000622045	PDE9A	O76083	593 aa		13.77	□□□□□ -0.21
SYNRG-231	ENST00000622045	SLC2A2	P11168	524 aa	Predicted RBP	13.77	□□□□□ -0.21
SYNRG-231	ENST00000622045	SDC2	P34741	201 aa		13.77	□□□□□ -0.21
SYNRG-231	ENST00000622045	GATM	P50440	423 aa		13.77	□□□□□ -0.21
SYNRG-231	ENST00000622045	VEZF1	Q14119	521 aa		13.77	□□□□□ -0.21
SYNRG-231	ENST00000622045	HKDC1	Q2TB90	917 aa		13.77	□□□□□ -0.21
SYNRG-231	ENST00000622045	MLIP	Q5VWP3	458 aa		13.77	□□□□□ -0.21
SYNRG-231	ENST00000622045	METTL2B	Q6P1Q9	378 aa	Known RBP	13.77	□□□□□ -0.21
SYNRG-231	ENST00000622045	XKRX	Q6PP77	449 aa		13.77	□□□□□ -0.21
SYNRG-231	ENST00000622045	TAGAP	Q8N103	731 aa		13.77	□□□□□ -0.21
SYNRG-231	ENST00000622045	PIKFYVE	Q9Y2I7	2098 aa		13.76	□□□□□ -0.21
SYNRG-231	ENST00000622045	SHOX	O15266	292 aa		13.76	□□□□□ -0.21
SYNRG-231	ENST00000622045	ANXA4	P09525	319 aa	Predicted RBP	13.76	□□□□□ -0.21
SYNRG-231	ENST00000622045	ANXA8	P13928	327 aa		13.76	□□□□□ -0.21
SYNRG-231	ENST00000622045	HOXB9	P17482	250 aa	Predicted RBP	13.76	□□□□□ -0.21
SYNRG-231	ENST00000622045	SMAD3	P84022	425 aa	Known RBP	13.76	□□□□□ -0.21
SYNRG-231	ENST00000622045	ZNF284	Q2VY69	593 aa		13.76	□□□□□ -0.21
SYNRG-231	ENST00000622045	AQP11	Q8NBQ7	271 aa		13.76	□□□□□ -0.21
SYNRG-231	ENST00000622045	PLD4	Q96BZ4	506 aa		13.76	□□□□□ -0.21
SYNRG-231	ENST00000622045	ZBED6CL	Q96FA7	236 aa	Predicted RBP	13.76	□□□□□ -0.21
SYNRG-231	ENST00000622045	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
SYNRG-231	ENST00000622045	MTX2	O75431	263 aa		13.76	□□□□□ -0.21
SYNRG-231	ENST00000622045	SDHB	P21912	280 aa		13.76	□□□□□ -0.21
SYNRG-231	ENST00000622045	CPN2	P22792	545 aa		13.76	□□□□□ -0.21
SYNRG-231	ENST00000622045	AOAH	P28039	575 aa		13.76	□□□□□ -0.21
SYNRG-231	ENST00000622045	OR1D2	P34982	312 aa		13.76	□□□□□ -0.21
SYNRG-231	ENST00000622045	P2RY14	Q15391	338 aa		13.76	□□□□□ -0.21
SYNRG-231	ENST00000622045	CREB3L2	Q70SY1	520 aa		13.76	□□□□□ -0.21
SYNRG-231	ENST00000622045	OTOP2	Q7RTS6	562 aa		13.76	□□□□□ -0.21
SYNRG-231	ENST00000622045	GPR26	Q8NDV2	337 aa		13.76	□□□□□ -0.21
SYNRG-231	ENST00000622045	C7orf57	Q8NEG2	295 aa		13.76	□□□□□ -0.21
SYNRG-231	ENST00000622045	OR4A15	Q8NGL6	344 aa		13.76	□□□□□ -0.21
SYNRG-231	ENST00000622045	UPRT	Q96BW1	309 aa		13.76	□□□□□ -0.21
SYNRG-231	ENST00000622045	QRFPR	Q96P65	431 aa		13.76	□□□□□ -0.21
SYNRG-231	ENST00000622045	TAPBPL	Q9BX59	468 aa		13.76	□□□□□ -0.21
SYNRG-231	ENST00000622045	CDCA4	Q9BXL8	241 aa		13.76	□□□□□ -0.21
SYNRG-231	ENST00000622045	KLHL21	Q9UJP4	597 aa		13.76	□□□□□ -0.21
SYNRG-231	ENST00000622045	NLRC5	Q86WI3	1866 aa		13.76	□□□□□ -0.21
SYNRG-231	ENST00000622045	MYL12B	O14950	172 aa		13.76	□□□□□ -0.21
SYNRG-231	ENST00000622045	SCG5	P05408	212 aa		13.76	□□□□□ -0.21
SYNRG-231	ENST00000622045	MYL12A	P19105	171 aa		13.76	□□□□□ -0.21
SYNRG-231	ENST00000622045	HLA-DMA	P28067	261 aa		13.76	□□□□□ -0.21

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