RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 ARMC6Q6NXE6 501 aa6.68□□□□□ -1.34
NEDD9-216ENST00000620854 NOXRED1Q6NXP6 359 aa6.68□□□□□ -1.34
NEDD9-216ENST00000620854 CDC73Q6P1J9 531 aa6.68□□□□□ -1.34
NEDD9-216ENST00000620854 PLET1Q6UQ28 207 aa6.68□□□□□ -1.34
NEDD9-216ENST00000620854 CD300LGQ6UXG3 332 aa6.68□□□□□ -1.34
NEDD9-216ENST00000620854 SERPINA13PQ6UXR4 307 aa6.68□□□□□ -1.34
NEDD9-216ENST00000620854 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.68□□□□□ -1.341e-6■■■■□ 24
NEDD9-216ENST00000620854 PRR23CQ6ZRP0 262 aa6.68□□□□□ -1.34
NEDD9-216ENST00000620854 HMGN2P46Q86SG4 172 aa6.68□□□□□ -1.34
NEDD9-216ENST00000620854 FAM124AQ86V42 546 aa6.68□□□□□ -1.34
NEDD9-216ENST00000620854 CALHM3Q86XJ0 350 aa6.68□□□□□ -1.34
NEDD9-216ENST00000620854 PTOV1Q86YD1 416 aa6.68□□□□□ -1.34
NEDD9-216ENST00000620854 ZZZ3Q8IYH5 903 aa6.68□□□□□ -1.34
NEDD9-216ENST00000620854 KIAA1958Q8N8K9 716 aa6.68□□□□□ -1.34
NEDD9-216ENST00000620854 OR5H6Q8NGV6 325 aa6.68□□□□□ -1.34
NEDD9-216ENST00000620854 FBLIM1Q8WUP2 373 aa6.68□□□□□ -1.34
NEDD9-216ENST00000620854 JPH3Q8WXH2 748 aaPredicted RBP6.68□□□□□ -1.34
NEDD9-216ENST00000620854 ING5Q8WYH8 240 aa6.68□□□□□ -1.34
NEDD9-216ENST00000620854 TRIM63Q969Q1 353 aa6.68□□□□□ -1.34
NEDD9-216ENST00000620854 TOX2Q96NM4 488 aa6.68□□□□□ -1.34
NEDD9-216ENST00000620854 BCL7BQ9BQE9 202 aa6.68□□□□□ -1.34
NEDD9-216ENST00000620854 CACNA1CQ13936 2221 aa6.68□□□□□ -1.34
NEDD9-216ENST00000620854 CEP290O15078 2479 aa6.68□□□□□ -1.34
NEDD9-216ENST00000620854 ZNF236Q9UL36 1845 aa6.68□□□□□ -1.34
NEDD9-216ENST00000620854 TRBV5-3A0A0A0MS03 114 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 FAM240BA0A1B0GVZ2 78 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 ERVH48-1M5A8F1 160 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 PDE9AO76083 593 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 ADH1CP00326 375 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 TIMP1P01033 207 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 IL7P13232 177 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 PTPN6P29350 595 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 CHIT1Q13231 466 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 CHRNA6Q15825 494 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 IER5LQ5T953 404 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 RAET1GQ6H3X3 334 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 ZNF852Q6ZMS4 543 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 RFLNAQ6ZTI6 216 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 NOXA1Q86UR1 476 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 OOSP2Q86WS3 158 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 MEX3DQ86XN8 651 aaKnown RBP6.67□□□□□ -1.34
NEDD9-216ENST00000620854 OR4A15Q8NGL6 344 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 POF1BQ8WVV4 589 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 PLD4Q96BZ4 506 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 PPCDCQ96CD2 204 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 MGME1Q9BQP7 344 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 EQTNQ9NQ60 294 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 ZNF226Q9NYT6 803 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 MAT2BQ9NZL9 334 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 COMMD3Q9UBI1 195 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 ZNF222Q9UK12 451 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 SSR3Q9UNL2 185 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 SCML2Q9UQR0 700 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 CARD8Q9Y2G2 431 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 AP3M1Q9Y2T2 418 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 HSPB11Q9Y547 144 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 MAU2Q9Y6X3 613 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 FABP12A6NFH5 140 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 PLD2O14939 933 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 ALX3O95076 343 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 CRYZL1O95825 349 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 HLA-EP13747 358 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 CNR2P34972 360 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 MAGEA2P43356 314 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 PTGES3Q15185 160 aaKnown RBP6.67□□□□□ -1.34
NEDD9-216ENST00000620854 TBCEQ15813 527 aaPredicted RBP6.67□□□□□ -1.34
NEDD9-216ENST00000620854 WDR45BQ5MNZ6 344 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 COX20Q5RI15 118 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 TRIM40Q6P9F5 258 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 TUBA3EQ6PEY2 450 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 LINC00299Q6ZSB3 139 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.67□□□□□ -1.34
NEDD9-216ENST00000620854 TIGD4Q8IY51 512 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 SLC38A6Q8IZM9 456 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 ZBTB2Q8N680 514 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 PIK3R3Q92569 461 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 TRMT61AQ96FX7 289 aaKnown RBP6.67□□□□□ -1.34
NEDD9-216ENST00000620854 MYO19Q96H55 970 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 MCCC1Q96RQ3 725 aaPredicted RBP6.67□□□□□ -1.34
NEDD9-216ENST00000620854 ZNF717Q9BY31 904 aaPredicted RBP6.67□□□□□ -1.34
NEDD9-216ENST00000620854 BARHL1Q9BZE3 327 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 ZCCHC2Q9C0B9 1178 aaKnown RBP6.67□□□□□ -1.34
NEDD9-216ENST00000620854 POLR2J2Q9GZM3 115 aaKnown RBP6.67□□□□□ -1.34
NEDD9-216ENST00000620854 SGK2Q9HBY8 427 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 SMURF1Q9HCE7 757 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 HCSTQ9UBK5 93 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 RPS6KB2Q9UBS0 482 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 MBD1Q9UIS9 605 aaPredicted RBP6.67□□□□□ -1.34
NEDD9-216ENST00000620854 ENTPD4Q9Y227 616 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 ANGPT4Q9Y264 503 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 CFL2Q9Y281 166 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 YARS2Q9Y2Z4 477 aaKnown RBP6.67□□□□□ -1.34
NEDD9-216ENST00000620854 GLYATL1P3A0A0U1RQE8 302 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 GRXCR2A6NFK2 248 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 CENPBD1B2RD01 187 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 RGS13O14921 159 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 CASKO14936 926 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 SLC28A2O43868 658 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 CYP17A1P05093 508 aa6.67□□□□□ -1.34
NEDD9-216ENST00000620854 ANXA4P09525 319 aaPredicted RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms