RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 TGFB1P01137 390 aa16.02■□□□□ 0.16
HMGN3-203ENST00000620514 ALDOAP04075 364 aaKnown RBP16.02■□□□□ 0.16
HMGN3-203ENST00000620514 EEF1DP29692 281 aaKnown RBP16.02■□□□□ 0.16
HMGN3-203ENST00000620514 HPDP32754 393 aaPredicted RBP16.02■□□□□ 0.16
HMGN3-203ENST00000620514 PER3P56645 1201 aa16.02■□□□□ 0.16
HMGN3-203ENST00000620514 FAM83EQ2M2I3 478 aa16.02■□□□□ 0.16
HMGN3-203ENST00000620514 MED27Q6P2C8 311 aa16.02■□□□□ 0.16
HMGN3-203ENST00000620514 ZNF595Q8IYB9 648 aa16.02■□□□□ 0.16
HMGN3-203ENST00000620514 LAS2Q8IYD9 372 aa16.02■□□□□ 0.16
HMGN3-203ENST00000620514 TMEM178AQ8NBL3 297 aa16.02■□□□□ 0.16
HMGN3-203ENST00000620514 RHEBL1Q8TAI7 183 aa16.02■□□□□ 0.16
HMGN3-203ENST00000620514 ADAMTS18Q8TE60 1221 aa16.02■□□□□ 0.16
HMGN3-203ENST00000620514 NCLNQ969V3 563 aa16.02■□□□□ 0.16
HMGN3-203ENST00000620514 GPR78Q96P69 363 aa16.02■□□□□ 0.16
HMGN3-203ENST00000620514 MAPKAP1Q9BPZ7 522 aa16.02■□□□□ 0.16
HMGN3-203ENST00000620514 CDC42EP4Q9H3Q1 356 aaKnown RBP16.02■□□□□ 0.16
HMGN3-203ENST00000620514 ACSS3Q9H6R3 686 aa16.02■□□□□ 0.16
HMGN3-203ENST00000620514 KCMF1Q9P0J7 381 aa16.02■□□□□ 0.16
HMGN3-203ENST00000620514 MRPS33Q9Y291 106 aaKnown RBP16.02■□□□□ 0.16
HMGN3-203ENST00000620514 TRGV8A0A0C4DH27 118 aa16.01■□□□□ 0.15
HMGN3-203ENST00000620514 A0A1B0GUH1 482 aa16.01■□□□□ 0.15
HMGN3-203ENST00000620514 ASPDHA6ND91 283 aa16.01■□□□□ 0.15
HMGN3-203ENST00000620514 SYCE1LA8MT33 242 aa16.01■□□□□ 0.15
HMGN3-203ENST00000620514 PRKNO60260 465 aaPredicted RBP16.01■□□□□ 0.15
HMGN3-203ENST00000620514 SLC25A12O75746 678 aa16.01■□□□□ 0.15
HMGN3-203ENST00000620514 KLHL2O95198 593 aa16.01■□□□□ 0.15
HMGN3-203ENST00000620514 ACSL3O95573 720 aa16.01■□□□□ 0.15
HMGN3-203ENST00000620514 EPB42P16452 691 aa16.01■□□□□ 0.15
HMGN3-203ENST00000620514 ATP5A1P25705 553 aaKnown RBP16.01■□□□□ 0.15
HMGN3-203ENST00000620514 TYK2P29597 1187 aa16.01■□□□□ 0.15
HMGN3-203ENST00000620514 PHBP35232 272 aa16.01■□□□□ 0.15
HMGN3-203ENST00000620514 CLCN2P51788 898 aa16.01■□□□□ 0.15
HMGN3-203ENST00000620514 GPR143P51810 404 aa16.01■□□□□ 0.15
HMGN3-203ENST00000620514 PCDH1Q08174 1060 aa16.01■□□□□ 0.15
HMGN3-203ENST00000620514 TGM3Q08188 693 aa16.01■□□□□ 0.15
HMGN3-203ENST00000620514 DDX39BQ13838 428 aaKnown RBP16.01■□□□□ 0.15
HMGN3-203ENST00000620514 SETDB1Q15047 1291 aa16.01■□□□□ 0.15
HMGN3-203ENST00000620514 ACAP2Q15057 778 aa16.01■□□□□ 0.15
HMGN3-203ENST00000620514 ZRSR2Q15696 482 aaKnown RBP16.01■□□□□ 0.15
HMGN3-203ENST00000620514 MAPKAPK3Q16644 382 aa16.01■□□□□ 0.15
HMGN3-203ENST00000620514 PFKFB4Q16877 469 aa16.01■□□□□ 0.15
HMGN3-203ENST00000620514 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.01■□□□□ 0.15
HMGN3-203ENST00000620514 PLD6Q8N2A8 252 aaKnown RBP16.01■□□□□ 0.15
HMGN3-203ENST00000620514 HORMAD2Q8N7B1 307 aa16.01■□□□□ 0.15
HMGN3-203ENST00000620514 OR7G3Q8NG95 312 aa16.01■□□□□ 0.15
HMGN3-203ENST00000620514 IFT81Q8WYA0 676 aa16.01■□□□□ 0.15
HMGN3-203ENST00000620514 UBE2E3Q969T4 207 aa16.01■□□□□ 0.15
HMGN3-203ENST00000620514 RELTQ969Z4 430 aa16.01■□□□□ 0.15
HMGN3-203ENST00000620514 FRMD6Q96NE9 622 aa16.01■□□□□ 0.15
HMGN3-203ENST00000620514 KCNC2Q96PR1 638 aa16.01■□□□□ 0.15
HMGN3-203ENST00000620514 TBCDQ9BTW9 1192 aa16.01■□□□□ 0.15
HMGN3-203ENST00000620514 SORBS1Q9BX66 1292 aaKnown RBP16.01■□□□□ 0.15
HMGN3-203ENST00000620514 VPS11Q9H270 941 aa16.01■□□□□ 0.15
HMGN3-203ENST00000620514 OR51B5Q9H339 312 aa16.01■□□□□ 0.15
HMGN3-203ENST00000620514 ZNF358Q9NW07 568 aa16.01■□□□□ 0.15
HMGN3-203ENST00000620514 MTRF1LQ9UGC7 380 aaKnown RBP16.01■□□□□ 0.15
HMGN3-203ENST00000620514 FBXW2Q9UKT8 454 aa16.01■□□□□ 0.15
HMGN3-203ENST00000620514 PPIEQ9UNP9 301 aaKnown RBP16.01■□□□□ 0.15
HMGN3-203ENST00000620514 UNC79Q9P2D8 2635 aa16.01■□□□□ 0.15
HMGN3-203ENST00000620514 NPIPA5E9PKD4 350 aa16■□□□□ 0.15
HMGN3-203ENST00000620514 NME2P1O60361 137 aa16■□□□□ 0.15
HMGN3-203ENST00000620514 CTNSO60931 367 aa16■□□□□ 0.15
HMGN3-203ENST00000620514 GFAPP14136 432 aa16■□□□□ 0.15
HMGN3-203ENST00000620514 NME2P22392 152 aa16■□□□□ 0.15
HMGN3-203ENST00000620514 ECHS1P30084 290 aa16■□□□□ 0.15
HMGN3-203ENST00000620514 TRHRP34981 398 aaPredicted RBP16■□□□□ 0.15
HMGN3-203ENST00000620514 DCTP40126 519 aa16■□□□□ 0.15
HMGN3-203ENST00000620514 CYB561P49447 251 aa16■□□□□ 0.15
HMGN3-203ENST00000620514 SERPINB8P50452 374 aa16■□□□□ 0.15
HMGN3-203ENST00000620514 HLCSP50747 726 aa16■□□□□ 0.15
HMGN3-203ENST00000620514 ALDH6A1Q02252 535 aaKnown RBP16■□□□□ 0.15
HMGN3-203ENST00000620514 ID2Q02363 134 aa16■□□□□ 0.15
HMGN3-203ENST00000620514 NAA30Q147X3 362 aaPredicted RBP16■□□□□ 0.15
HMGN3-203ENST00000620514 TERF2Q15554 542 aa16■□□□□ 0.15
HMGN3-203ENST00000620514 GRHL2Q6ISB3 625 aa16■□□□□ 0.15
HMGN3-203ENST00000620514 C16orf47Q6ZP98 133 aaPredicted RBP16■□□□□ 0.15
HMGN3-203ENST00000620514 CCDC91Q7Z6B0 441 aa16■□□□□ 0.15
HMGN3-203ENST00000620514 MYLK4Q86YV6 388 aaPredicted RBP16■□□□□ 0.15
HMGN3-203ENST00000620514 RELL1Q8IUW5 271 aa16■□□□□ 0.15
HMGN3-203ENST00000620514 ARMC10Q8N2F6 343 aa16■□□□□ 0.15
HMGN3-203ENST00000620514 ACOT4Q8N9L9 421 aa16■□□□□ 0.15
HMGN3-203ENST00000620514 SREK1Q8WXA9 508 aaKnown RBP16■□□□□ 0.15
HMGN3-203ENST00000620514 VMP1Q96GC9 406 aa16■□□□□ 0.15
HMGN3-203ENST00000620514 FUT8Q9BYC5 575 aa16■□□□□ 0.15
HMGN3-203ENST00000620514 ROGDIQ9GZN7 287 aa16■□□□□ 0.15
HMGN3-203ENST00000620514 TRIM45Q9H8W5 580 aaPredicted RBP16■□□□□ 0.15
HMGN3-203ENST00000620514 LIN28AQ9H9Z2 209 aaKnown RBP16■□□□□ 0.15
HMGN3-203ENST00000620514 LYRM4Q9HD34 91 aa16■□□□□ 0.15
HMGN3-203ENST00000620514 ADAP2Q9NPF8 381 aa16■□□□□ 0.15
HMGN3-203ENST00000620514 CPSF2Q9P2I0 782 aaKnown RBP16■□□□□ 0.15
HMGN3-203ENST00000620514 SH3BGRL2Q9UJC5 107 aa16■□□□□ 0.15
HMGN3-203ENST00000620514 NPIPA1Q9UND3 350 aa16■□□□□ 0.15
HMGN3-203ENST00000620514 ANGPTL3Q9Y5C1 460 aa16■□□□□ 0.15
HMGN3-203ENST00000620514 FCHO1O14526 889 aa15.99■□□□□ 0.15
HMGN3-203ENST00000620514 KLK8O60259 260 aa15.99■□□□□ 0.15
HMGN3-203ENST00000620514 LDB3O75112 727 aa15.99■□□□□ 0.15
HMGN3-203ENST00000620514 SIX3O95343 332 aaPredicted RBP15.99■□□□□ 0.15
HMGN3-203ENST00000620514 IFNA16P05015 189 aa15.99■□□□□ 0.15
HMGN3-203ENST00000620514 HIST1H1TP22492 207 aaPredicted RBP15.99■□□□□ 0.15
HMGN3-203ENST00000620514 SSR2P43308 183 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms