RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 SLC9A3R1O14745 358 aaPredicted RBP9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 IRAK2O43187 625 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 SEPT4O43236 478 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 EEF1E1O43324 174 aaKnown RBP9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 STAU1O95793 577 aaKnown RBP9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 RAF1P04049 648 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 XPAP23025 273 aaPredicted RBP9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 ACLYP53396 1101 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 MFSD13AQ14CX5 517 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 PCBP1Q15365 356 aaKnown RBP eCLIP9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 DUSP28Q4G0W2 176 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 KLHL22Q53GT1 634 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 CXorf57Q6NSI4 855 aaKnown RBP9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 IL20RBQ6UXL0 311 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 FAM151BQ6UXP7 276 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 ZNF551Q7Z340 670 aaPredicted RBP9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 C9orf62Q8N4C0 152 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 KCTD13Q8WZ19 329 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 ATG10Q9H0Y0 220 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 SPNS1Q9H2V7 528 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 CLMPQ9H6B4 373 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 EXTL2Q9UBQ6 330 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 HRH3Q9Y5N1 445 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 CACNA1CQ13936 2221 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 GTPBP1O00178 669 aaKnown RBP9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 PIRO00625 290 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 SIGLEC5O15389 551 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 SLC25A14O95258 325 aaPredicted RBP9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 KCNK5O95279 499 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 PDYNP01213 254 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 OR4Q2P0C623 313 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 OGNP20774 298 aaKnown RBP9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 GKP32189 559 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 TTPAP49638 278 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 ITGA1P56199 1179 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 CLDN8P56748 225 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 HSF2Q03933 536 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 PRKCZQ05513 592 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 SIGLEC14Q08ET2 396 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 TNK1Q13470 666 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 LHFPL3Q86UP9 236 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 VPS37AQ8NEZ2 397 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 CREB3L4Q8TEY5 395 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 LPPQ93052 612 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 APIPQ96GX9 242 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 TSSK6Q9BXA6 273 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 MIXL1Q9H2W2 232 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 NANSQ9NR45 359 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 DICER1Q9UPY3 1922 aaKnown RBP9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 A0A1W2PPL8 197 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 MROH6A6NGR9 719 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 ZNF670-ZNF695F2Z2N8 137 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 CSO75390 466 aaKnown RBP9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 GATBO75879 557 aaKnown RBP9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 RGS11O94810 467 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 GBAP04062 536 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 HOXA11P31270 313 aaPredicted RBP9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 PGFP49763 221 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 TPMTP51580 245 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 TSPAN5P62079 268 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 HSPA14Q0VDF9 509 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 GRB14Q14449 540 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 HKDC1Q2TB90 917 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 FAM180BQ6P0A1 224 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 ZNF613Q6PF04 617 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 AGMOQ6ZNB7 445 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 METTL23Q86XA0 190 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 MEX3DQ86XN8 651 aaKnown RBP9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 NAGSQ8N159 534 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 LILRB1Q8NHL6 650 aaPredicted RBP9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 RAET1EQ8TD07 263 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 CD200R1Q8TD46 325 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 LINC00052Q96N35 136 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 CINPQ9BW66 212 aaPredicted RBP9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 PCDHB16Q9NRJ7 776 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 NUDT4Q9NZJ9 180 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 SNX11Q9Y5W9 270 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 A0A0A6YYJ9 748 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 MGAT4DA6NG13 374 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 MEIS3P2A8K0S8 358 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 TRIM77I1YAP6 450 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 M0QZ92 97 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 SYN3O14994 580 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 STK16O75716 305 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 TRBC1P01850 177 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 SMIM10L2AP0DMW4 78 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 SMIM10L2BP0DMW5 78 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 CPT1AP50416 773 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 FGL2Q14314 439 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 GNA13Q14344 377 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 EIF4HQ15056 248 aaKnown RBP9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 SLC39A12Q504Y0 691 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 ATCAYQ86WG3 371 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 MARCH9Q86YJ5 346 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 C11orf65Q8NCR3 313 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 OR7D4Q8NG98 312 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 OR6M1Q8NGM8 313 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 RADILQ96JH8 1075 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 ZYG11BQ9C0D3 744 aa9.37□□□□□ -0.91
TNFAIP3-210ENST00000620204 RANBP3Q9H6Z4 567 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms