RNA–Protein interactions for RNA: ENST00000618363.4

SHANK2-221, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-221ENST00000618363 LRRK2Q5S007 2527 aa10.95□□□□□ -0.66
SHANK2-221ENST00000618363 A0A087WUV0 522 aaPredicted RBP10.95□□□□□ -0.66
SHANK2-221ENST00000618363 A1L4Q6 167 aa10.95□□□□□ -0.66
SHANK2-221ENST00000618363 DYRK3O43781 588 aa10.95□□□□□ -0.66
SHANK2-221ENST00000618363 CTNSO60931 367 aa10.95□□□□□ -0.66
SHANK2-221ENST00000618363 SMIM24O75264 130 aa10.95□□□□□ -0.66
SHANK2-221ENST00000618363 TGFB1P01137 390 aa10.95□□□□□ -0.66
SHANK2-221ENST00000618363 CPN2P22792 545 aa10.95□□□□□ -0.66
SHANK2-221ENST00000618363 CERS1P27544 350 aa10.95□□□□□ -0.66
SHANK2-221ENST00000618363 TLX1P31314 330 aaPredicted RBP10.95□□□□□ -0.66
SHANK2-221ENST00000618363 GMPRP36959 345 aa10.95□□□□□ -0.66
SHANK2-221ENST00000618363 CD96P40200 585 aa10.95□□□□□ -0.66
SHANK2-221ENST00000618363 LIM2P55344 173 aa10.95□□□□□ -0.66
SHANK2-221ENST00000618363 IRF9Q00978 393 aa10.95□□□□□ -0.66
SHANK2-221ENST00000618363 SERTAD2Q14140 314 aa10.95□□□□□ -0.66
SHANK2-221ENST00000618363 SETDB1Q15047 1291 aa10.95□□□□□ -0.66
SHANK2-221ENST00000618363 TERF2Q15554 542 aa10.95□□□□□ -0.66
SHANK2-221ENST00000618363 MAPKAPK3Q16644 382 aa10.95□□□□□ -0.66
SHANK2-221ENST00000618363 TSNAXIP1Q2TAA8 658 aa10.95□□□□□ -0.66
SHANK2-221ENST00000618363 C4orf17Q53FE4 359 aa10.95□□□□□ -0.66
SHANK2-221ENST00000618363 SPINK14Q6IE38 97 aa10.95□□□□□ -0.66
SHANK2-221ENST00000618363 GRHL2Q6ISB3 625 aa10.95□□□□□ -0.66
SHANK2-221ENST00000618363 SLC25A25Q6KCM7 469 aa10.95□□□□□ -0.66
SHANK2-221ENST00000618363 CLNKQ7Z7G1 428 aa10.95□□□□□ -0.66
SHANK2-221ENST00000618363 CENPLQ8N0S6 344 aaPredicted RBP10.95□□□□□ -0.66
SHANK2-221ENST00000618363 KIF2BQ8N4N8 673 aa10.95□□□□□ -0.66
SHANK2-221ENST00000618363 TMEM156Q8N614 296 aa10.95□□□□□ -0.66
SHANK2-221ENST00000618363 NOA1Q8NC60 698 aaKnown RBP10.95□□□□□ -0.66
SHANK2-221ENST00000618363 ZNF473Q8WTR7 871 aaKnown RBP10.95□□□□□ -0.66
SHANK2-221ENST00000618363 SLC44A1Q8WWI5 657 aa10.95□□□□□ -0.66
SHANK2-221ENST00000618363 DAZLQ92904 295 aaKnown RBP10.95□□□□□ -0.66
SHANK2-221ENST00000618363 RGMAQ96B86 450 aa10.95□□□□□ -0.66
SHANK2-221ENST00000618363 VMP1Q96GC9 406 aa10.95□□□□□ -0.66
SHANK2-221ENST00000618363 QRFPRQ96P65 431 aa10.95□□□□□ -0.66
SHANK2-221ENST00000618363 PAFAH2Q99487 392 aa10.95□□□□□ -0.66
SHANK2-221ENST00000618363 SLX1AQ9BQ83 275 aa10.95□□□□□ -0.66
SHANK2-221ENST00000618363 LYRM4Q9HD34 91 aa10.95□□□□□ -0.66
SHANK2-221ENST00000618363 ADAP2Q9NPF8 381 aa10.95□□□□□ -0.66
SHANK2-221ENST00000618363 MS4A12Q9NXJ0 267 aa10.95□□□□□ -0.66
SHANK2-221ENST00000618363 ERRFI1Q9UJM3 462 aaPredicted RBP10.95□□□□□ -0.66
SHANK2-221ENST00000618363 DAPP1Q9UN19 280 aa10.95□□□□□ -0.66
SHANK2-221ENST00000618363 PTPN13Q12923 2485 aa10.95□□□□□ -0.66
SHANK2-221ENST00000618363 CPAMD8Q8IZJ3 1885 aa10.94□□□□□ -0.66
SHANK2-221ENST00000618363 IGKV3D-11A0A0A0MRZ8 115 aa10.94□□□□□ -0.66
SHANK2-221ENST00000618363 TRBV11-1A0A0K0K1C0 115 aa10.94□□□□□ -0.66
SHANK2-221ENST00000618363 C4orf51C9J302 202 aa10.94□□□□□ -0.66
SHANK2-221ENST00000618363 LRRTM2O43300 516 aa10.94□□□□□ -0.66
SHANK2-221ENST00000618363 UGDHO60701 494 aa10.94□□□□□ -0.66
SHANK2-221ENST00000618363 SH3BGRLO75368 114 aa10.94□□□□□ -0.66
SHANK2-221ENST00000618363 ZFAND5O76080 213 aa10.94□□□□□ -0.66
SHANK2-221ENST00000618363 UNC5CO95185 931 aa10.94□□□□□ -0.66
SHANK2-221ENST00000618363 COL6A2P12110 1019 aa10.94□□□□□ -0.66
SHANK2-221ENST00000618363 COX7A2P14406 83 aa10.94□□□□□ -0.66
SHANK2-221ENST00000618363 CD22P20273 847 aa10.94□□□□□ -0.66
SHANK2-221ENST00000618363 PTX3P26022 381 aaPredicted RBP10.94□□□□□ -0.66
SHANK2-221ENST00000618363 PIK3CBP42338 1070 aa10.94□□□□□ -0.66
SHANK2-221ENST00000618363 ALDH6A1Q02252 535 aaKnown RBP10.94□□□□□ -0.66
SHANK2-221ENST00000618363 GTF2H2Q13888 395 aa10.94□□□□□ -0.66
SHANK2-221ENST00000618363 NAA30Q147X3 362 aaPredicted RBP10.94□□□□□ -0.66
SHANK2-221ENST00000618363 ELAVL1Q15717 326 aaKnown RBP10.94□□□□□ -0.66
SHANK2-221ENST00000618363 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.94□□□□□ -0.66
SHANK2-221ENST00000618363 KHDRBS2Q5VWX1 349 aaKnown RBP10.94□□□□□ -0.66
SHANK2-221ENST00000618363 TTC19Q6DKK2 380 aaPredicted RBP10.94□□□□□ -0.66
SHANK2-221ENST00000618363 GTF2H2CQ6P1K8 395 aa10.94□□□□□ -0.66
SHANK2-221ENST00000618363 METTL2BQ6P1Q9 378 aaKnown RBP10.94□□□□□ -0.66
SHANK2-221ENST00000618363 VN1R5Q7Z5H4 357 aa10.94□□□□□ -0.66
SHANK2-221ENST00000618363 LAS2Q8IYD9 372 aa10.94□□□□□ -0.66
SHANK2-221ENST00000618363 ACOT4Q8N9L9 421 aa10.94□□□□□ -0.66
SHANK2-221ENST00000618363 OR7G3Q8NG95 312 aa10.94□□□□□ -0.66
SHANK2-221ENST00000618363 THAP3Q8WTV1 239 aaPredicted RBP10.94□□□□□ -0.66
SHANK2-221ENST00000618363 TAAR6Q96RI8 345 aa10.94□□□□□ -0.66
SHANK2-221ENST00000618363 MS4A8Q9BY19 250 aa10.94□□□□□ -0.66
SHANK2-221ENST00000618363 ALOXE3Q9BYJ1 711 aa10.94□□□□□ -0.66
SHANK2-221ENST00000618363 AICDAQ9GZX7 198 aa10.94□□□□□ -0.66
SHANK2-221ENST00000618363 IPPKQ9H8X2 491 aa10.94□□□□□ -0.66
SHANK2-221ENST00000618363 PRDM7Q9NQW5 492 aa10.94□□□□□ -0.66
SHANK2-221ENST00000618363 SUCOQ9UBS9 1254 aaKnown RBP10.94□□□□□ -0.66
SHANK2-221ENST00000618363 ASB1Q9Y576 335 aa10.94□□□□□ -0.66
SHANK2-221ENST00000618363 ZGRF1Q86YA3 2104 aa10.94□□□□□ -0.66
SHANK2-221ENST00000618363 TRGV8A0A0C4DH27 118 aa10.93□□□□□ -0.66
SHANK2-221ENST00000618363 EXOC1LA0A1B0GW35 172 aa10.93□□□□□ -0.66
SHANK2-221ENST00000618363 KLRC4-KLRK1H3BQV0 150 aa10.93□□□□□ -0.66
SHANK2-221ENST00000618363 SAP18O00422 153 aaKnown RBP10.93□□□□□ -0.66
SHANK2-221ENST00000618363 E2F3O00716 465 aa10.93□□□□□ -0.66
SHANK2-221ENST00000618363 PRAMEF4O60810 478 aa10.93□□□□□ -0.66
SHANK2-221ENST00000618363 SLC25A12O75746 678 aa10.93□□□□□ -0.66
SHANK2-221ENST00000618363 LDLRP01130 860 aa10.93□□□□□ -0.66
SHANK2-221ENST00000618363 ALDOAP04075 364 aaKnown RBP10.93□□□□□ -0.66
SHANK2-221ENST00000618363 SP1P08047 785 aa10.93□□□□□ -0.66
SHANK2-221ENST00000618363 MTHFD2P13995 350 aa10.93□□□□□ -0.66
SHANK2-221ENST00000618363 EPORP19235 508 aa10.93□□□□□ -0.66
SHANK2-221ENST00000618363 HIST1H1TP22492 207 aaPredicted RBP10.93□□□□□ -0.66
SHANK2-221ENST00000618363 ATP5A1P25705 553 aaKnown RBP10.93□□□□□ -0.66
SHANK2-221ENST00000618363 TPP2P29144 1249 aaPredicted RBP10.93□□□□□ -0.66
SHANK2-221ENST00000618363 PPP2R1BP30154 601 aa10.93□□□□□ -0.66
SHANK2-221ENST00000618363 CCNG1P51959 295 aa10.93□□□□□ -0.66
SHANK2-221ENST00000618363 KCNK10P57789 538 aa10.93□□□□□ -0.66
SHANK2-221ENST00000618363 MLF1P58340 268 aa10.93□□□□□ -0.66
SHANK2-221ENST00000618363 SRSF11Q05519 484 aaKnown RBP10.93□□□□□ -0.66
SHANK2-221ENST00000618363 PCDH1Q08174 1060 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms