RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 CHERPQ8IWX8 916 aaKnown RBP20.72■□□□□ 0.91
NEDD4L-237ENST00000617539 ZNF595Q8IYB9 648 aa20.72■□□□□ 0.91
NEDD4L-237ENST00000617539 CENPLQ8N0S6 344 aaPredicted RBP20.72■□□□□ 0.91
NEDD4L-237ENST00000617539 CPSF7Q8N684 471 aaKnown RBP20.72■□□□□ 0.91
NEDD4L-237ENST00000617539 STAG3L4Q8TBR4 150 aa20.72■□□□□ 0.91
NEDD4L-237ENST00000617539 ADAMTS18Q8TE60 1221 aa20.72■□□□□ 0.91
NEDD4L-237ENST00000617539 UBTD2Q8WUN7 234 aa20.72■□□□□ 0.91
NEDD4L-237ENST00000617539 MS4A8Q9BY19 250 aa20.72■□□□□ 0.91
NEDD4L-237ENST00000617539 NPIPA1Q9UND3 350 aa20.72■□□□□ 0.91
NEDD4L-237ENST00000617539 ENTPD4Q9Y227 616 aa20.72■□□□□ 0.91
NEDD4L-237ENST00000617539 PCNX1Q96RV3 2341 aa20.72■□□□□ 0.91
NEDD4L-237ENST00000617539 GTF3C1Q12789 2109 aa20.71■□□□□ 0.91
NEDD4L-237ENST00000617539 A0A088AWK7 358 aa20.71■□□□□ 0.91
NEDD4L-237ENST00000617539 TMEM200CA6NKL6 621 aa20.71■□□□□ 0.91
NEDD4L-237ENST00000617539 KERAO60938 352 aa20.71■□□□□ 0.91
NEDD4L-237ENST00000617539 S100BP04271 92 aaPredicted RBP20.71■□□□□ 0.91
NEDD4L-237ENST00000617539 ZNF10P21506 573 aaPredicted RBP20.71■□□□□ 0.91
NEDD4L-237ENST00000617539 GRNP28799 593 aaKnown RBP20.71■□□□□ 0.91
NEDD4L-237ENST00000617539 CLCN2P51788 898 aa20.71■□□□□ 0.91
NEDD4L-237ENST00000617539 IRF9Q00978 393 aa20.71■□□□□ 0.91
NEDD4L-237ENST00000617539 NAB1Q13506 487 aa20.71■□□□□ 0.91
NEDD4L-237ENST00000617539 C16orf47Q6ZP98 133 aaPredicted RBP20.71■□□□□ 0.91
NEDD4L-237ENST00000617539 Q6ZPB1 254 aaPredicted RBP20.71■□□□□ 0.91
NEDD4L-237ENST00000617539 ZNF473Q8WTR7 871 aaKnown RBP20.71■□□□□ 0.91
NEDD4L-237ENST00000617539 NCLNQ969V3 563 aa20.71■□□□□ 0.91
NEDD4L-237ENST00000617539 NXNL1Q96CM4 212 aa20.71■□□□□ 0.91
NEDD4L-237ENST00000617539 VMP1Q96GC9 406 aa20.71■□□□□ 0.91
NEDD4L-237ENST00000617539 ZDHHC18Q9NUE0 388 aa20.71■□□□□ 0.91
NEDD4L-237ENST00000617539 MYOCOSA0A1B0GUC4 107 aa20.7■□□□□ 0.9
NEDD4L-237ENST00000617539 SUPT3HB4E1H0 165 aa20.7■□□□□ 0.9
NEDD4L-237ENST00000617539 PRSS44E7EML9 344 aa20.7■□□□□ 0.9
NEDD4L-237ENST00000617539 RTCAO00442 366 aaKnown RBP20.7■□□□□ 0.9
NEDD4L-237ENST00000617539 CLDN4O14493 209 aa20.7■□□□□ 0.9
NEDD4L-237ENST00000617539 FCHO1O14526 889 aa20.7■□□□□ 0.9
NEDD4L-237ENST00000617539 SUPT3HO75486 399 aa20.7■□□□□ 0.9
NEDD4L-237ENST00000617539 LTA4HP09960 611 aaKnown RBP20.7■□□□□ 0.9
NEDD4L-237ENST00000617539 CRABP2P29373 138 aa20.7■□□□□ 0.9
NEDD4L-237ENST00000617539 HPDP32754 393 aaPredicted RBP20.7■□□□□ 0.9
NEDD4L-237ENST00000617539 MSH2P43246 934 aa20.7■□□□□ 0.9
NEDD4L-237ENST00000617539 ADORA2A-AS1P86434 159 aa20.7■□□□□ 0.9
NEDD4L-237ENST00000617539 HSF1Q00613 529 aa20.7■□□□□ 0.9
NEDD4L-237ENST00000617539 PCDH1Q08174 1060 aa20.7■□□□□ 0.9
NEDD4L-237ENST00000617539 LAPTM5Q13571 262 aa20.7■□□□□ 0.9
NEDD4L-237ENST00000617539 BMPR2Q13873 1038 aa20.7■□□□□ 0.9
NEDD4L-237ENST00000617539 KRTCAP3Q53RY4 240 aa20.7■□□□□ 0.9
NEDD4L-237ENST00000617539 PAGE2BQ5JRK9 111 aa20.7■□□□□ 0.9
NEDD4L-237ENST00000617539 TBC1D1Q86TI0 1168 aaPredicted RBP20.7■□□□□ 0.9
NEDD4L-237ENST00000617539 TICAM1Q8IUC6 712 aa20.7■□□□□ 0.9
NEDD4L-237ENST00000617539 LAS2Q8IYD9 372 aa20.7■□□□□ 0.9
NEDD4L-237ENST00000617539 SLC34A3Q8N130 599 aa20.7■□□□□ 0.9
NEDD4L-237ENST00000617539 FAM98AQ8NCA5 519 aaKnown RBP20.7■□□□□ 0.9
NEDD4L-237ENST00000617539 KCTD4Q8WVF5 259 aa20.7■□□□□ 0.9
NEDD4L-237ENST00000617539 KCNC2Q96PR1 638 aa20.7■□□□□ 0.9
NEDD4L-237ENST00000617539 COPS7BQ9H9Q2 264 aaPredicted RBP20.7■□□□□ 0.9
NEDD4L-237ENST00000617539 NMRAL1Q9HBL8 299 aa20.7■□□□□ 0.9
NEDD4L-237ENST00000617539 ADAP2Q9NPF8 381 aa20.7■□□□□ 0.9
NEDD4L-237ENST00000617539 SUCOQ9UBS9 1254 aaKnown RBP20.7■□□□□ 0.9
NEDD4L-237ENST00000617539 ABCA12Q86UK0 2595 aa20.7■□□□□ 0.9
NEDD4L-237ENST00000617539 ADGRG4Q8IZF6 3080 aa20.69■□□□□ 0.9
NEDD4L-237ENST00000617539 ASNA1O43681 348 aa20.69■□□□□ 0.9
NEDD4L-237ENST00000617539 ITGA10O75578 1167 aa20.69■□□□□ 0.9
NEDD4L-237ENST00000617539 PRF1P14222 555 aa20.69■□□□□ 0.9
NEDD4L-237ENST00000617539 ZNF24P17028 368 aa20.69■□□□□ 0.9
NEDD4L-237ENST00000617539 ART3Q13508 389 aa20.69■□□□□ 0.9
NEDD4L-237ENST00000617539 ELAVL1Q15717 326 aaKnown RBP20.69■□□□□ 0.9
NEDD4L-237ENST00000617539 MDGA2Q7Z553 956 aa20.69■□□□□ 0.9
NEDD4L-237ENST00000617539 FGD2Q7Z6J4 655 aa20.69■□□□□ 0.9
NEDD4L-237ENST00000617539 MRGPRGQ86SM5 289 aa20.69■□□□□ 0.9
NEDD4L-237ENST00000617539 SPPL2CQ8IUH8 684 aa20.69■□□□□ 0.9
NEDD4L-237ENST00000617539 RNF175Q8N4F7 328 aa20.69■□□□□ 0.9
NEDD4L-237ENST00000617539 MAGED4Q96JG8 741 aa20.69■□□□□ 0.9
NEDD4L-237ENST00000617539 MAPKAP1Q9BPZ7 522 aa20.69■□□□□ 0.9
NEDD4L-237ENST00000617539 LRRC1Q9BTT6 524 aa20.69■□□□□ 0.9
NEDD4L-237ENST00000617539 LYRM4Q9HD34 91 aa20.69■□□□□ 0.9
NEDD4L-237ENST00000617539 FBXW2Q9UKT8 454 aa20.69■□□□□ 0.9
NEDD4L-237ENST00000617539 MRPS33Q9Y291 106 aaKnown RBP20.69■□□□□ 0.9
NEDD4L-237ENST00000617539 CSMD1Q96PZ7 3565 aa20.68■□□□□ 0.9
NEDD4L-237ENST00000617539 ARHGAP10A1A4S6 786 aa20.68■□□□□ 0.9
NEDD4L-237ENST00000617539 K7EPI3 171 aa20.68■□□□□ 0.9
NEDD4L-237ENST00000617539 CTNSO60931 367 aa20.68■□□□□ 0.9
NEDD4L-237ENST00000617539 SH3BGRLO75368 114 aa20.68■□□□□ 0.9
NEDD4L-237ENST00000617539 ATP5A1P25705 553 aaKnown RBP20.68■□□□□ 0.9
NEDD4L-237ENST00000617539 HIST2H2ACQ16777 129 aaPredicted RBP20.68■□□□□ 0.9
NEDD4L-237ENST00000617539 MROH9Q5TGP6 573 aa20.68■□□□□ 0.9
NEDD4L-237ENST00000617539 SP5Q6BEB4 398 aaPredicted RBP20.68■□□□□ 0.9
NEDD4L-237ENST00000617539 HIST2H2AA3Q6FI13 130 aa20.68■□□□□ 0.9
NEDD4L-237ENST00000617539 SULF2Q8IWU5 870 aa20.68■□□□□ 0.9
NEDD4L-237ENST00000617539 ZNF808Q8N4W9 903 aaPredicted RBP20.68■□□□□ 0.9
NEDD4L-237ENST00000617539 ACOT4Q8N9L9 421 aa20.68■□□□□ 0.9
NEDD4L-237ENST00000617539 OR7G3Q8NG95 312 aa20.68■□□□□ 0.9
NEDD4L-237ENST00000617539 PTPMT1Q8WUK0 201 aaPredicted RBP20.68■□□□□ 0.9
NEDD4L-237ENST00000617539 MARVELD3Q96A59 401 aa20.68■□□□□ 0.9
NEDD4L-237ENST00000617539 LIN28AQ9H9Z2 209 aaKnown RBP20.68■□□□□ 0.9
NEDD4L-237ENST00000617539 OPTCQ9UBM4 332 aa20.68■□□□□ 0.9
NEDD4L-237ENST00000617539 ACOT9Q9Y305 439 aa20.68■□□□□ 0.9
NEDD4L-237ENST00000617539 SCELO95171 688 aa20.67■□□□□ 0.9
NEDD4L-237ENST00000617539 MLYCDO95822 493 aa20.67■□□□□ 0.9
NEDD4L-237ENST00000617539 TGFB1P01137 390 aa20.67■□□□□ 0.9
NEDD4L-237ENST00000617539 C2P06681 752 aa20.67■□□□□ 0.9
NEDD4L-237ENST00000617539 PCNAP12004 261 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms