RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 OR52A4PA6NMU1 304 aa13.86□□□□□ -0.19
SHROOM1-208ENST00000617339 GABRR3A8MPY1 467 aa13.86□□□□□ -0.19
SHROOM1-208ENST00000617339 KPNA5O15131 536 aa13.86□□□□□ -0.19
SHROOM1-208ENST00000617339 FGF19O95750 216 aa13.86□□□□□ -0.19
SHROOM1-208ENST00000617339 ADRB3P13945 408 aa13.86□□□□□ -0.19
SHROOM1-208ENST00000617339 GADD45AP24522 165 aa13.86□□□□□ -0.19
SHROOM1-208ENST00000617339 HTRA4P83105 476 aaPredicted RBP13.86□□□□□ -0.19
SHROOM1-208ENST00000617339 PPP2R2BQ00005 443 aa13.86□□□□□ -0.19
SHROOM1-208ENST00000617339 TAB1Q15750 504 aa13.86□□□□□ -0.19
SHROOM1-208ENST00000617339 CPTPQ5TA50 214 aa13.86□□□□□ -0.19
SHROOM1-208ENST00000617339 TRIM48Q8IWZ4 208 aa13.86□□□□□ -0.19
SHROOM1-208ENST00000617339 SLC38A6Q8IZM9 456 aa13.86□□□□□ -0.19
SHROOM1-208ENST00000617339 ATG16L2Q8NAA4 619 aa13.86□□□□□ -0.19
SHROOM1-208ENST00000617339 ISG20Q96AZ6 181 aaKnown RBP13.86□□□□□ -0.19
SHROOM1-208ENST00000617339 ZCCHC2Q9C0B9 1178 aaKnown RBP13.86□□□□□ -0.19
SHROOM1-208ENST00000617339 QPCTLQ9NXS2 382 aa13.86□□□□□ -0.19
SHROOM1-208ENST00000617339 RHCGQ9UBD6 479 aa13.86□□□□□ -0.19
SHROOM1-208ENST00000617339 TRPS1Q9UHF7 1281 aa13.86□□□□□ -0.19
SHROOM1-208ENST00000617339 CRYZL1O95825 349 aa13.86□□□□□ -0.19
SHROOM1-208ENST00000617339 AMD1P17707 334 aa13.86□□□□□ -0.19
SHROOM1-208ENST00000617339 MMP12P39900 470 aa13.86□□□□□ -0.19
SHROOM1-208ENST00000617339 PXNP49023 591 aaPredicted RBP13.86□□□□□ -0.19
SHROOM1-208ENST00000617339 CDC20Q12834 499 aa13.86□□□□□ -0.19
SHROOM1-208ENST00000617339 Q6ZPB1 254 aaPredicted RBP13.86□□□□□ -0.19
SHROOM1-208ENST00000617339 ZNF557Q8N988 423 aaPredicted RBP13.86□□□□□ -0.19
SHROOM1-208ENST00000617339 NEDD4LQ96PU5 975 aa13.86□□□□□ -0.19
SHROOM1-208ENST00000617339 SH3GL1Q99961 368 aa13.86□□□□□ -0.19
SHROOM1-208ENST00000617339 CHCHD6Q9BRQ6 235 aa13.86□□□□□ -0.19
SHROOM1-208ENST00000617339 OR2B2Q9GZK3 357 aa13.86□□□□□ -0.19
SHROOM1-208ENST00000617339 CTPS2Q9NRF8 586 aa13.86□□□□□ -0.19
SHROOM1-208ENST00000617339 EHD3Q9NZN3 535 aa13.86□□□□□ -0.19
SHROOM1-208ENST00000617339 WBP11Q9Y2W2 641 aaKnown RBP13.86□□□□□ -0.19
SHROOM1-208ENST00000617339 RGS5O15539 181 aa13.85□□□□□ -0.19
SHROOM1-208ENST00000617339 EPN2O95208 641 aa13.85□□□□□ -0.19
SHROOM1-208ENST00000617339 IFNA8P32881 189 aa13.85□□□□□ -0.19
SHROOM1-208ENST00000617339 GRK3P35626 688 aa13.85□□□□□ -0.19
SHROOM1-208ENST00000617339 PRIM2P49643 509 aa13.85□□□□□ -0.19
SHROOM1-208ENST00000617339 TAS2R50P59544 299 aa13.85□□□□□ -0.19
SHROOM1-208ENST00000617339 UGT8Q16880 541 aa13.85□□□□□ -0.19
SHROOM1-208ENST00000617339 ZNF551Q7Z340 670 aaPredicted RBP13.85□□□□□ -0.19
SHROOM1-208ENST00000617339 OR10G6Q8NH81 332 aa13.85□□□□□ -0.19
SHROOM1-208ENST00000617339 TP53INP1Q96A56 240 aa13.85□□□□□ -0.19
SHROOM1-208ENST00000617339 CEP19Q96LK0 163 aa13.85□□□□□ -0.19
SHROOM1-208ENST00000617339 LYSMD1Q96S90 227 aa13.85□□□□□ -0.19
SHROOM1-208ENST00000617339 DUSP26Q9BV47 211 aa13.85□□□□□ -0.19
SHROOM1-208ENST00000617339 CLMPQ9H6B4 373 aa13.85□□□□□ -0.19
SHROOM1-208ENST00000617339 RPRD1BQ9NQG5 326 aaKnown RBP13.85□□□□□ -0.19
SHROOM1-208ENST00000617339 USE1Q9NZ43 259 aa13.85□□□□□ -0.19
SHROOM1-208ENST00000617339 GULP1Q9UBP9 304 aa13.85□□□□□ -0.19
SHROOM1-208ENST00000617339 ARID1BQ8NFD5 2236 aaPredicted RBP13.85□□□□□ -0.19
SHROOM1-208ENST00000617339 MYO10Q9HD67 2058 aa13.85□□□□□ -0.19
SHROOM1-208ENST00000617339 GGT1P19440 569 aa13.85□□□□□ -0.19
SHROOM1-208ENST00000617339 LIPAP38571 399 aa13.85□□□□□ -0.19
SHROOM1-208ENST00000617339 RUNX3Q13761 415 aa13.85□□□□□ -0.19
SHROOM1-208ENST00000617339 BCL7AQ4VC05 210 aa13.85□□□□□ -0.19
SHROOM1-208ENST00000617339 ZNF542PQ5EBM4 170 aa13.85□□□□□ -0.19
SHROOM1-208ENST00000617339 PRSS36Q5K4E3 855 aa13.85□□□□□ -0.19
SHROOM1-208ENST00000617339 AGAP6Q5VW22 663 aa13.85□□□□□ -0.19
SHROOM1-208ENST00000617339 TCAIMQ8N3R3 496 aa13.85□□□□□ -0.19
SHROOM1-208ENST00000617339 TRAM1L1Q8N609 369 aa13.85□□□□□ -0.19
SHROOM1-208ENST00000617339 OR4A15Q8NGL6 344 aa13.85□□□□□ -0.19
SHROOM1-208ENST00000617339 AGAP4Q96P64 663 aa13.85□□□□□ -0.19
SHROOM1-208ENST00000617339 ABCG4Q9H172 646 aa13.85□□□□□ -0.19
SHROOM1-208ENST00000617339 ABCG2Q9UNQ0 655 aa13.85□□□□□ -0.19
SHROOM1-208ENST00000617339 RGS13O14921 159 aa13.85□□□□□ -0.19
SHROOM1-208ENST00000617339 PCDH7O60245 1069 aa13.85□□□□□ -0.19
SHROOM1-208ENST00000617339 ZNF30P17039 623 aa13.85□□□□□ -0.19
SHROOM1-208ENST00000617339 PTNP21246 168 aa13.85□□□□□ -0.19
SHROOM1-208ENST00000617339 DEFA1P59665 94 aa13.85□□□□□ -0.19
SHROOM1-208ENST00000617339 DEFA3P59666 94 aa13.85□□□□□ -0.19
SHROOM1-208ENST00000617339 TBRG1Q3YBR2 411 aa13.85□□□□□ -0.19
SHROOM1-208ENST00000617339 C9orf64Q5T6V5 341 aa13.85□□□□□ -0.19
SHROOM1-208ENST00000617339 ZDHHC21Q8IVQ6 265 aa13.85□□□□□ -0.19
SHROOM1-208ENST00000617339 TP53I13Q8NBR0 393 aaPredicted RBP13.85□□□□□ -0.19
SHROOM1-208ENST00000617339 TFGQ92734 400 aaPredicted RBP13.85□□□□□ -0.19
SHROOM1-208ENST00000617339 PLA2G2FQ9BZM2 168 aa13.85□□□□□ -0.19
SHROOM1-208ENST00000617339 ACOT13Q9NPJ3 140 aa13.85□□□□□ -0.19
SHROOM1-208ENST00000617339 FZD4Q9ULV1 537 aa13.85□□□□□ -0.19
SHROOM1-208ENST00000617339 TPST2O60704 377 aa13.84□□□□□ -0.19
SHROOM1-208ENST00000617339 C6orf47O95873 294 aa13.84□□□□□ -0.19
SHROOM1-208ENST00000617339 ETFAP13804 333 aa13.84□□□□□ -0.19
SHROOM1-208ENST00000617339 CLDN8P56748 225 aa13.84□□□□□ -0.19
SHROOM1-208ENST00000617339 ZNF181Q2M3W8 571 aa13.84□□□□□ -0.19
SHROOM1-208ENST00000617339 SPDYE7PQ495Y7 208 aa13.84□□□□□ -0.19
SHROOM1-208ENST00000617339 HORMAD1Q86X24 394 aa13.84□□□□□ -0.19
SHROOM1-208ENST00000617339 ELMOD2Q8IZ81 293 aa13.84□□□□□ -0.19
SHROOM1-208ENST00000617339 NAGSQ8N159 534 aa13.84□□□□□ -0.19
SHROOM1-208ENST00000617339 USP7Q93009 1102 aa13.84□□□□□ -0.19
SHROOM1-208ENST00000617339 F2RL3Q96RI0 385 aa13.84□□□□□ -0.19
SHROOM1-208ENST00000617339 FERD3LQ96RJ6 166 aa13.84□□□□□ -0.19
SHROOM1-208ENST00000617339 TMEM245Q9H330 911 aa13.84□□□□□ -0.19
SHROOM1-208ENST00000617339 TPT1P8Q9HAU6 139 aa13.84□□□□□ -0.19
SHROOM1-208ENST00000617339 MBNL1Q9NR56 388 aaKnown RBP13.84□□□□□ -0.19
SHROOM1-208ENST00000617339 CUEDC1Q9NWM3 386 aaPredicted RBP13.84□□□□□ -0.19
SHROOM1-208ENST00000617339 VNN3Q9NY84 501 aa13.84□□□□□ -0.19
SHROOM1-208ENST00000617339 COQ3Q9NZJ6 369 aa13.84□□□□□ -0.19
SHROOM1-208ENST00000617339 KIF17Q9P2E2 1029 aa13.84□□□□□ -0.19
SHROOM1-208ENST00000617339 FBXL21Q9UKT6 434 aa13.84□□□□□ -0.19
SHROOM1-208ENST00000617339 SCN3AQ9NY46 2000 aa13.84□□□□□ -0.19
SHROOM1-208ENST00000617339 A0A096LPI6 279 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms