RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 NPHS2Q9NP85 383 aa16.57■□□□□ 0.24
TRAPPC3-209ENST00000616395 SLCO1B3Q9NPD5 702 aa16.57■□□□□ 0.24
TRAPPC3-209ENST00000616395 KCNN3Q9UGI6 736 aa16.57■□□□□ 0.24
TRAPPC3-209ENST00000616395 TEKT2Q9UIF3 430 aa16.57■□□□□ 0.24
TRAPPC3-209ENST00000616395 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.57■□□□□ 0.24
TRAPPC3-209ENST00000616395 KRT87PA6NCN2 255 aa16.56■□□□□ 0.24
TRAPPC3-209ENST00000616395 ASPDHA6ND91 283 aa16.56■□□□□ 0.24
TRAPPC3-209ENST00000616395 A8MUI8 341 aa16.56■□□□□ 0.24
TRAPPC3-209ENST00000616395 G3V2L1 256 aa16.56■□□□□ 0.24
TRAPPC3-209ENST00000616395 PRRG2O14669 202 aa16.56■□□□□ 0.24
TRAPPC3-209ENST00000616395 CTSVO60911 334 aa16.56■□□□□ 0.24
TRAPPC3-209ENST00000616395 KERAO60938 352 aa16.56■□□□□ 0.24
TRAPPC3-209ENST00000616395 SNNO75324 88 aaPredicted RBP16.56■□□□□ 0.24
TRAPPC3-209ENST00000616395 GFAPP14136 432 aa16.56■□□□□ 0.24
TRAPPC3-209ENST00000616395 FBLP22087 321 aaKnown RBP16.56■□□□□ 0.24
TRAPPC3-209ENST00000616395 ST13P50502 369 aaKnown RBP16.56■□□□□ 0.24
TRAPPC3-209ENST00000616395 AP2B1P63010 937 aa16.56■□□□□ 0.24
TRAPPC3-209ENST00000616395 FCRLBQ6BAA4 426 aa16.56■□□□□ 0.24
TRAPPC3-209ENST00000616395 FRMPD2BQ6IN97 320 aa16.56■□□□□ 0.24
TRAPPC3-209ENST00000616395 FGD2Q7Z6J4 655 aa16.56■□□□□ 0.24
TRAPPC3-209ENST00000616395 BEST3Q8N1M1 668 aa16.56■□□□□ 0.24
TRAPPC3-209ENST00000616395 GHDCQ8N2G8 530 aa16.56■□□□□ 0.24
TRAPPC3-209ENST00000616395 MDS2Q8NDY4 140 aa16.56■□□□□ 0.24
TRAPPC3-209ENST00000616395 CFAP61Q8NHU2 1237 aa16.56■□□□□ 0.24
TRAPPC3-209ENST00000616395 PIWIL2Q8TC59 973 aaKnown RBP16.56■□□□□ 0.24
TRAPPC3-209ENST00000616395 LINGO1Q96FE5 620 aa16.56■□□□□ 0.24
TRAPPC3-209ENST00000616395 FAR2Q96K12 515 aa16.56■□□□□ 0.24
TRAPPC3-209ENST00000616395 GPR78Q96P69 363 aa16.56■□□□□ 0.24
TRAPPC3-209ENST00000616395 UCK2Q9BZX2 261 aa16.56■□□□□ 0.24
TRAPPC3-209ENST00000616395 LIME1Q9H400 295 aa16.56■□□□□ 0.24
TRAPPC3-209ENST00000616395 ALG9Q9H6U8 611 aa16.56■□□□□ 0.24
TRAPPC3-209ENST00000616395 INTS7Q9NVH2 962 aaKnown RBP16.56■□□□□ 0.24
TRAPPC3-209ENST00000616395 GALPQ9UBC7 116 aa16.56■□□□□ 0.24
TRAPPC3-209ENST00000616395 LOC102723996A0A087X1L8 192 aa16.55■□□□□ 0.24
TRAPPC3-209ENST00000616395 FAM90A27PA6NNH2 459 aa16.55■□□□□ 0.24
TRAPPC3-209ENST00000616395 KDM1AO60341 852 aa16.55■□□□□ 0.24
TRAPPC3-209ENST00000616395 ICAM2P13598 275 aa16.55■□□□□ 0.24
TRAPPC3-209ENST00000616395 AOAHP28039 575 aa16.55■□□□□ 0.24
TRAPPC3-209ENST00000616395 EEF1DP29692 281 aaKnown RBP16.55■□□□□ 0.24
TRAPPC3-209ENST00000616395 OCRLQ01968 901 aa16.55■□□□□ 0.24
TRAPPC3-209ENST00000616395 MYBPHQ13203 477 aa16.55■□□□□ 0.24
TRAPPC3-209ENST00000616395 RCN2Q14257 317 aa16.55■□□□□ 0.24
TRAPPC3-209ENST00000616395 YTHDF3Q7Z739 585 aaKnown RBP16.55■□□□□ 0.24
TRAPPC3-209ENST00000616395 SLC22A15Q8IZD6 547 aa16.55■□□□□ 0.24
TRAPPC3-209ENST00000616395 EID3Q8N140 333 aa16.55■□□□□ 0.24
TRAPPC3-209ENST00000616395 CCNYL1Q8N7R7 359 aa16.55■□□□□ 0.24
TRAPPC3-209ENST00000616395 CD200R1Q8TD46 325 aa16.55■□□□□ 0.24
TRAPPC3-209ENST00000616395 SLC22A18Q96BI1 424 aa16.55■□□□□ 0.24
TRAPPC3-209ENST00000616395 IMMP1LQ96LU5 166 aa16.55■□□□□ 0.24
TRAPPC3-209ENST00000616395 SMR3AQ99954 134 aa16.55■□□□□ 0.24
TRAPPC3-209ENST00000616395 YIPF2Q9BWQ6 316 aa16.55■□□□□ 0.24
TRAPPC3-209ENST00000616395 DRC3Q9H069 523 aa16.55■□□□□ 0.24
TRAPPC3-209ENST00000616395 PFDN4Q9NQP4 134 aa16.55■□□□□ 0.24
TRAPPC3-209ENST00000616395 ANKRD10Q9NXR5 420 aa16.55■□□□□ 0.24
TRAPPC3-209ENST00000616395 TRPC4Q9UBN4 977 aa16.55■□□□□ 0.24
TRAPPC3-209ENST00000616395 VTI1BQ9UEU0 232 aa16.55■□□□□ 0.24
TRAPPC3-209ENST00000616395 STK38LQ9Y2H1 464 aa16.55■□□□□ 0.24
TRAPPC3-209ENST00000616395 RAP2CQ9Y3L5 183 aa16.55■□□□□ 0.24
TRAPPC3-209ENST00000616395 ASB1Q9Y576 335 aa16.55■□□□□ 0.24
TRAPPC3-209ENST00000616395 SUPT3HB4E1H0 165 aa16.54■□□□□ 0.24
TRAPPC3-209ENST00000616395 SRPX2O60687 465 aaPredicted RBP16.54■□□□□ 0.24
TRAPPC3-209ENST00000616395 SUPT3HO75486 399 aa16.54■□□□□ 0.24
TRAPPC3-209ENST00000616395 GPC4O75487 556 aa16.54■□□□□ 0.24
TRAPPC3-209ENST00000616395 TOXO94900 526 aa16.54■□□□□ 0.24
TRAPPC3-209ENST00000616395 WISP3O95389 354 aaPredicted RBP16.54■□□□□ 0.24
TRAPPC3-209ENST00000616395 HEXBP07686 556 aa16.54■□□□□ 0.24
TRAPPC3-209ENST00000616395 MSX1P28360 303 aa16.54■□□□□ 0.24
TRAPPC3-209ENST00000616395 DLG1Q12959 904 aa16.54■□□□□ 0.24
TRAPPC3-209ENST00000616395 IFT88Q13099 833 aa16.54■□□□□ 0.24
TRAPPC3-209ENST00000616395 TUBA3CQ13748 450 aa16.54■□□□□ 0.24
TRAPPC3-209ENST00000616395 SF1Q15637 639 aaKnown RBP16.54■□□□□ 0.24
TRAPPC3-209ENST00000616395 TUBA3EQ6PEY2 450 aa16.54■□□□□ 0.24
TRAPPC3-209ENST00000616395 ZCCHC23Q6ZST2 131 aa16.54■□□□□ 0.24
TRAPPC3-209ENST00000616395 ISCA2Q86U28 154 aa16.54■□□□□ 0.24
TRAPPC3-209ENST00000616395 GPSM1Q86YR5 675 aa16.54■□□□□ 0.24
TRAPPC3-209ENST00000616395 MARVELD2Q8N4S9 558 aa16.54■□□□□ 0.24
TRAPPC3-209ENST00000616395 LILRB4Q8NHJ6 448 aa16.54■□□□□ 0.24
TRAPPC3-209ENST00000616395 SCMH1Q96GD3 660 aa16.54■□□□□ 0.24
TRAPPC3-209ENST00000616395 C10orf90Q96M02 699 aa16.54■□□□□ 0.24
TRAPPC3-209ENST00000616395 IL17FQ96PD4 163 aa16.54■□□□□ 0.24
TRAPPC3-209ENST00000616395 TUBB6Q9BUF5 446 aa16.54■□□□□ 0.24
TRAPPC3-209ENST00000616395 MENTQ9BUN1 341 aa16.54■□□□□ 0.24
TRAPPC3-209ENST00000616395 MRGBPQ9NV56 204 aa16.54■□□□□ 0.24
TRAPPC3-209ENST00000616395 DNAJB12Q9NXW2 375 aaKnown RBP16.54■□□□□ 0.24
TRAPPC3-209ENST00000616395 ST6GALNAC2Q9UJ37 374 aa16.54■□□□□ 0.24
TRAPPC3-209ENST00000616395 TNPO3Q9Y5L0 923 aaKnown RBP16.54■□□□□ 0.24
TRAPPC3-209ENST00000616395 LOC105369274A0A096LPK9 316 aa16.53■□□□□ 0.24
TRAPPC3-209ENST00000616395 A0A0G2JND7 137 aa16.53■□□□□ 0.24
TRAPPC3-209ENST00000616395 LOC102723532A0A0G2JNH3 316 aa16.53■□□□□ 0.24
TRAPPC3-209ENST00000616395 TARM1B6A8C7 271 aa16.53■□□□□ 0.24
TRAPPC3-209ENST00000616395 DLX3O60479 287 aa16.53■□□□□ 0.24
TRAPPC3-209ENST00000616395 CCDC22O60826 627 aa16.53■□□□□ 0.24
TRAPPC3-209ENST00000616395 EIF2S1P05198 315 aaKnown RBP16.53■□□□□ 0.24
TRAPPC3-209ENST00000616395 HOXD4P09016 255 aaPredicted RBP16.53■□□□□ 0.24
TRAPPC3-209ENST00000616395 IMPDH1P20839 514 aa16.53■□□□□ 0.24
TRAPPC3-209ENST00000616395 CD96P40200 585 aa16.53■□□□□ 0.24
TRAPPC3-209ENST00000616395 BDKRB1P46663 353 aa16.53■□□□□ 0.24
TRAPPC3-209ENST00000616395 CLCN7P51798 805 aa16.53■□□□□ 0.24
TRAPPC3-209ENST00000616395 NAGLUP54802 743 aa16.53■□□□□ 0.24
TRAPPC3-209ENST00000616395 ACER2Q5QJU3 275 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms