RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 CMC1Q7Z7K0 106 aa17.72■□□□□ 0.43
CDX1-202ENST00000616154 ISCA2Q86U28 154 aa17.72■□□□□ 0.43
CDX1-202ENST00000616154 GHDCQ8N2G8 530 aa17.72■□□□□ 0.43
CDX1-202ENST00000616154 WDR34Q96EX3 536 aa17.72■□□□□ 0.43
CDX1-202ENST00000616154 PHF12Q96QT6 1004 aa17.72■□□□□ 0.43
CDX1-202ENST00000616154 TMEM109Q9BVC6 243 aa17.72■□□□□ 0.43
CDX1-202ENST00000616154 TRIM8Q9BZR9 551 aa17.72■□□□□ 0.43
CDX1-202ENST00000616154 NT5DC2Q9H857 520 aa17.72■□□□□ 0.43
CDX1-202ENST00000616154 CNOT10Q9H9A5 744 aaKnown RBP17.72■□□□□ 0.43
CDX1-202ENST00000616154 POLQO75417 2590 aa17.72■□□□□ 0.43
CDX1-202ENST00000616154 CCDC168Q8NDH2 2452 aa17.72■□□□□ 0.43
CDX1-202ENST00000616154 IGKV3D-11A0A0A0MRZ8 115 aa17.72■□□□□ 0.43
CDX1-202ENST00000616154 TCRBV16S1A1N1A0A5B0 115 aa17.72■□□□□ 0.43
CDX1-202ENST00000616154 URADA6NGE7 173 aa17.72■□□□□ 0.43
CDX1-202ENST00000616154 SNRPB2P08579 225 aaKnown RBP17.72■□□□□ 0.43
CDX1-202ENST00000616154 C1GALT1C1LP0DN25 315 aa17.72■□□□□ 0.43
CDX1-202ENST00000616154 RNH1P13489 461 aaKnown RBP17.72■□□□□ 0.43
CDX1-202ENST00000616154 ZNF24P17028 368 aa17.72■□□□□ 0.43
CDX1-202ENST00000616154 TRHRP34981 398 aaPredicted RBP17.72■□□□□ 0.43
CDX1-202ENST00000616154 KCNC1P48547 511 aa17.72■□□□□ 0.43
CDX1-202ENST00000616154 CYB561P49447 251 aa17.72■□□□□ 0.43
CDX1-202ENST00000616154 MLF1P58340 268 aa17.72■□□□□ 0.43
CDX1-202ENST00000616154 BTG2P78543 158 aa17.72■□□□□ 0.43
CDX1-202ENST00000616154 PCDH1Q08174 1060 aa17.72■□□□□ 0.43
CDX1-202ENST00000616154 DLG1Q12959 904 aa17.72■□□□□ 0.43
CDX1-202ENST00000616154 RASA2Q15283 850 aa17.72■□□□□ 0.43
CDX1-202ENST00000616154 MAPKAPK3Q16644 382 aa17.72■□□□□ 0.43
CDX1-202ENST00000616154 ZNF227Q86WZ6 799 aa17.72■□□□□ 0.43
CDX1-202ENST00000616154 CHERPQ8IWX8 916 aaKnown RBP17.72■□□□□ 0.43
CDX1-202ENST00000616154 CYP4X1Q8N118 509 aa17.72■□□□□ 0.43
CDX1-202ENST00000616154 ARMC10Q8N2F6 343 aa17.72■□□□□ 0.43
CDX1-202ENST00000616154 NFAM1Q8NET5 270 aaPredicted RBP17.72■□□□□ 0.43
CDX1-202ENST00000616154 TTLQ8NG68 377 aa17.72■□□□□ 0.43
CDX1-202ENST00000616154 STAG3L4Q8TBR4 150 aa17.72■□□□□ 0.43
CDX1-202ENST00000616154 LURAP1Q96LR2 239 aa17.72■□□□□ 0.43
CDX1-202ENST00000616154 ATOH8Q96SQ7 321 aa17.72■□□□□ 0.43
CDX1-202ENST00000616154 PPCSQ9HAB8 311 aa17.72■□□□□ 0.43
CDX1-202ENST00000616154 PRDM9Q9NQV7 894 aa17.72■□□□□ 0.43
CDX1-202ENST00000616154 IGSF5Q9NSI5 407 aa17.72■□□□□ 0.43
CDX1-202ENST00000616154 AKAP9Q99996 3911 aa17.71■□□□□ 0.43
CDX1-202ENST00000616154 F8P00451 2351 aa17.71■□□□□ 0.43
CDX1-202ENST00000616154 PRAMEF4O60810 478 aa17.71■□□□□ 0.42
CDX1-202ENST00000616154 KERAO60938 352 aa17.71■□□□□ 0.42
CDX1-202ENST00000616154 CLDN14O95500 239 aa17.71■□□□□ 0.42
CDX1-202ENST00000616154 SHBGP04278 402 aa17.71■□□□□ 0.42
CDX1-202ENST00000616154 ABOP16442 354 aa17.71■□□□□ 0.42
CDX1-202ENST00000616154 POU3F2P20265 443 aaPredicted RBP17.71■□□□□ 0.42
CDX1-202ENST00000616154 MAOAP21397 527 aa17.71■□□□□ 0.42
CDX1-202ENST00000616154 GCAP28676 217 aa17.71■□□□□ 0.42
CDX1-202ENST00000616154 HLCSP50747 726 aa17.71■□□□□ 0.42
CDX1-202ENST00000616154 RAB8AP61006 207 aa17.71■□□□□ 0.42
CDX1-202ENST00000616154 CASP8Q14790 479 aa17.71■□□□□ 0.42
CDX1-202ENST00000616154 CDSNQ15517 529 aa17.71■□□□□ 0.42
CDX1-202ENST00000616154 RNFT1Q5M7Z0 435 aa17.71■□□□□ 0.42
CDX1-202ENST00000616154 PRAMEF9Q5VWM5 478 aa17.71■□□□□ 0.42
CDX1-202ENST00000616154 CENPLQ8N0S6 344 aaPredicted RBP17.71■□□□□ 0.42
CDX1-202ENST00000616154 CPSF7Q8N684 471 aaKnown RBP17.71■□□□□ 0.42
CDX1-202ENST00000616154 PHF10Q8WUB8 498 aaKnown RBP17.71■□□□□ 0.42
CDX1-202ENST00000616154 UBTD2Q8WUN7 234 aa17.71■□□□□ 0.42
CDX1-202ENST00000616154 SLC44A1Q8WWI5 657 aa17.71■□□□□ 0.42
CDX1-202ENST00000616154 ISL2Q96A47 359 aa17.71■□□□□ 0.42
CDX1-202ENST00000616154 MTFMTQ96DP5 389 aaKnown RBP17.71■□□□□ 0.42
CDX1-202ENST00000616154 AICDAQ9GZX7 198 aa17.71■□□□□ 0.42
CDX1-202ENST00000616154 NMRAL1Q9HBL8 299 aa17.71■□□□□ 0.42
CDX1-202ENST00000616154 DNAJC11Q9NVH1 559 aa17.71■□□□□ 0.42
CDX1-202ENST00000616154 WWOXQ9NZC7 414 aa17.71■□□□□ 0.42
CDX1-202ENST00000616154 NUDT4Q9NZJ9 180 aa17.71■□□□□ 0.42
CDX1-202ENST00000616154 ADGRG4Q8IZF6 3080 aa17.7■□□□□ 0.42
CDX1-202ENST00000616154 NCF1BA6NI72 391 aaPredicted RBP17.7■□□□□ 0.42
CDX1-202ENST00000616154 NCF1CA8MVU1 366 aaPredicted RBP17.7■□□□□ 0.42
CDX1-202ENST00000616154 C19orf84I3L1E1 186 aa17.7■□□□□ 0.42
CDX1-202ENST00000616154 PSMD12O00232 456 aaPredicted RBP17.7■□□□□ 0.42
CDX1-202ENST00000616154 STK16O75716 305 aa17.7■□□□□ 0.42
CDX1-202ENST00000616154 LTA4HP09960 611 aaKnown RBP17.7■□□□□ 0.42
CDX1-202ENST00000616154 NCF1P14598 390 aaPredicted RBP17.7■□□□□ 0.42
CDX1-202ENST00000616154 EPORP19235 508 aa17.7■□□□□ 0.42
CDX1-202ENST00000616154 TFEBP19484 476 aa17.7■□□□□ 0.42
CDX1-202ENST00000616154 HNF4AP41235 474 aa17.7■□□□□ 0.42
CDX1-202ENST00000616154 HSF1Q00613 529 aa17.7■□□□□ 0.42
CDX1-202ENST00000616154 ADPRMQ3LIE5 342 aa17.7■□□□□ 0.42
CDX1-202ENST00000616154 TMIGD1Q6UXZ0 262 aa17.7■□□□□ 0.42
CDX1-202ENST00000616154 TBC1D1Q86TI0 1168 aaPredicted RBP17.7■□□□□ 0.42
CDX1-202ENST00000616154 TDRPQ86YL5 185 aa17.7■□□□□ 0.42
CDX1-202ENST00000616154 CA13Q8N1Q1 262 aa17.7■□□□□ 0.42
CDX1-202ENST00000616154 POGLUT1Q8NBL1 392 aa17.7■□□□□ 0.42
CDX1-202ENST00000616154 ARMC2Q8NEN0 867 aa17.7■□□□□ 0.42
CDX1-202ENST00000616154 RHEBL1Q8TAI7 183 aa17.7■□□□□ 0.42
CDX1-202ENST00000616154 UHMK1Q8TAS1 419 aaKnown RBP17.7■□□□□ 0.42
CDX1-202ENST00000616154 TMEM125Q96AQ2 219 aa17.7■□□□□ 0.42
CDX1-202ENST00000616154 KLHL31Q9H511 634 aa17.7■□□□□ 0.42
CDX1-202ENST00000616154 NECTIN3Q9NQS3 549 aa17.7■□□□□ 0.42
CDX1-202ENST00000616154 A0A087X1B8 175 aa17.69■□□□□ 0.42
CDX1-202ENST00000616154 C4orf51C9J302 202 aa17.69■□□□□ 0.42
CDX1-202ENST00000616154 FCHO1O14526 889 aa17.69■□□□□ 0.42
CDX1-202ENST00000616154 TBX6O95947 436 aaPredicted RBP17.69■□□□□ 0.42
CDX1-202ENST00000616154 MTHFD2P13995 350 aa17.69■□□□□ 0.42
CDX1-202ENST00000616154 GMPRP36959 345 aa17.69■□□□□ 0.42
CDX1-202ENST00000616154 CASP2P42575 452 aa17.69■□□□□ 0.42
CDX1-202ENST00000616154 MAGEA12P43365 314 aa17.69■□□□□ 0.42
CDX1-202ENST00000616154 HSPA7P48741 367 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms