RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 CDKN2CP42773 168 aa10.4□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 ARHGDIAP52565 204 aa10.4□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 CAMK1Q14012 370 aa10.4□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 BCL2A1Q16548 175 aa10.4□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 PSRC1Q6PGN9 363 aaPredicted RBP10.4□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 FBXO46Q6PJ61 603 aaPredicted RBP10.4□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 PARS2Q7L3T8 475 aaKnown RBP10.4□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 UBE2Q1Q7Z7E8 422 aa10.4□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 PTOV1Q86YD1 416 aa10.4□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 ZDHHC21Q8IVQ6 265 aa10.4□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 C10orf111Q8N326 155 aa10.4□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 STX19Q8N4C7 294 aa10.4□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 PARP16Q8N5Y8 322 aa10.4□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 RHOXF1Q8NHV9 184 aa10.4□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 RAB7BQ96AH8 199 aa10.4□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 COX14Q96I36 57 aa10.4□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 ZSWIM3Q96MP5 696 aa10.4□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 FOPNLQ96NB1 174 aa10.4□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 TMEM245Q9H330 911 aa10.4□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 RANGRFQ9HD47 186 aaPredicted RBP10.4□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 MAT2BQ9NZL9 334 aa10.4□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 ATG2AQ2TAZ0 1938 aa10.4□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 TSPAN6O43657 245 aa10.4□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 MED26O95402 600 aa10.4□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 ACVR2AP27037 513 aa10.4□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 HTR2BP41595 481 aa10.4□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 ISL1P61371 349 aa10.4□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 TEKQ02763 1124 aa10.4□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 SF1Q15637 639 aaKnown RBP10.4□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 KDM4DQ6B0I6 523 aa10.4□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 LAIR2Q6ISS4 152 aa10.4□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 CAPN13Q6MZZ7 669 aaPredicted RBP10.4□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 IKBIPQ70UQ0 350 aa10.4□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 DCP2Q8IU60 420 aaKnown RBP10.4□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 SLC38A6Q8IZM9 456 aa10.4□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 NATD1Q8N6N6 113 aa10.4□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 POF1BQ8WVV4 589 aa10.4□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 PAWRQ96IZ0 340 aaKnown RBP10.4□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 NT5DC2Q9H857 520 aa10.4□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 AASDHPPTQ9NRN7 309 aa10.4□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 KRT84Q9NSB2 600 aa10.4□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 ABCG2Q9UNQ0 655 aa10.4□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 CARD8Q9Y2G2 431 aa10.4□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 PADI2Q9Y2J8 665 aa10.4□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 LAMA2P24043 3122 aaKnown RBP10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 CLIC1O00299 241 aa10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 SLC22A1O15245 554 aa10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 ICMTO60725 284 aa10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 STSP08842 583 aa10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 ACRP10323 421 aa10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 IDSP22304 550 aa10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 PCGF2P35227 344 aa10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 CTSCP53634 463 aa10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 DEFA1P59665 94 aa10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 DEFA3P59666 94 aa10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 TIGD6Q17RP2 521 aa10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 HNRNPA1L2Q32P51 320 aaKnown RBP10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 SPDYE7PQ495Y7 208 aa10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 TMEM240Q5SV17 173 aa10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 C9orf64Q5T6V5 341 aa10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 ERN2Q76MJ5 926 aaKnown RBP10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 CCDC120Q96HB5 630 aa10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 CNPPD1Q9BV87 410 aa10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 GPR83Q9NYM4 423 aa10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 CD84Q9UIB8 345 aa10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 ICKQ9UPZ9 632 aa10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 TESMINQ9Y4I5 508 aa10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 MKI67P46013 3256 aaKnown RBP10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 A0A1W2PQ72 361 aa10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 OR6C70A6NIJ9 312 aa10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 C12orf71A8MTZ7 269 aa10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 MAGEB17A8MXT2 336 aa10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 E7EQ34 232 aa10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 TLL1O43897 1013 aa10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 SNX4O95219 450 aa10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 APOL3O95236 402 aa10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 ELFN1P0C7U0 828 aa10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 RAB15P59190 212 aa10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 RBBP4Q09028 425 aa10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 SLAMF1Q13291 335 aa10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 NFE2L1Q14494 772 aa10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 ARHGAP19Q14CB8 494 aa10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 XKR6Q5GH73 641 aa10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 ADAMTSL4Q6UY14 1074 aa10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 GLCCI1Q86VQ1 547 aa10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 RNF175Q8N4F7 328 aa10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 OR7G3Q8NG95 312 aa10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 OR2L2Q8NH16 312 aa10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 SPPL2AQ8TCT8 520 aa10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 AP2M1Q96CW1 435 aa10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 SAMD11Q96NU1 681 aa10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 EPYCQ99645 322 aa10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 ZNF282Q9UDV7 671 aaPredicted RBP10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 ALPK3Q96L96 1907 aa10.39□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 A8MUA0 341 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 GPR89AB7ZAQ6 455 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 FPGTO14772 594 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 EPN2O95208 641 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 GPR89BP0CG08 455 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 NPPBP16860 134 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms