RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 PROB1E7EW31 1015 aa16.61■□□□□ 0.25
SREK1-216ENST00000612404 MED26O95402 600 aa16.61■□□□□ 0.25
SREK1-216ENST00000612404 LAMP1P11279 417 aa16.61■□□□□ 0.25
SREK1-216ENST00000612404 DDCP20711 480 aa16.61■□□□□ 0.25
SREK1-216ENST00000612404 TRA2AQ13595 282 aaKnown RBP eCLIP16.61■□□□□ 0.25
SREK1-216ENST00000612404 MAPKAPK3Q16644 382 aa16.61■□□□□ 0.25
SREK1-216ENST00000612404 MUM1Q2TAK8 710 aa16.61■□□□□ 0.25
SREK1-216ENST00000612404 GARNL3Q5VVW2 1013 aa16.61■□□□□ 0.25
SREK1-216ENST00000612404 OR4F3Q6IEY1 312 aa16.61■□□□□ 0.25
SREK1-216ENST00000612404 MRM1Q6IN84 353 aaKnown RBP16.61■□□□□ 0.25
SREK1-216ENST00000612404 RBM44Q6ZP01 1051 aaKnown RBP16.61■□□□□ 0.25
SREK1-216ENST00000612404 TICAM1Q8IUC6 712 aa16.61■□□□□ 0.25
SREK1-216ENST00000612404 KIF2BQ8N4N8 673 aa16.61■□□□□ 0.25
SREK1-216ENST00000612404 ATP6V1HQ9UI12 483 aa16.61■□□□□ 0.25
SREK1-216ENST00000612404 A0A1W2PR48 441 aa16.61■□□□□ 0.25
SREK1-216ENST00000612404 DNAJB6O75190 326 aa16.61■□□□□ 0.25
SREK1-216ENST00000612404 RDH16O75452 317 aa16.61■□□□□ 0.25
SREK1-216ENST00000612404 KRT16P08779 473 aa16.61■□□□□ 0.25
SREK1-216ENST00000612404 SKP1P63208 163 aa16.61■□□□□ 0.25
SREK1-216ENST00000612404 PHC1P78364 1004 aa16.61■□□□□ 0.25
SREK1-216ENST00000612404 ZFP36L1Q07352 338 aaKnown RBP16.61■□□□□ 0.25
SREK1-216ENST00000612404 ILKQ13418 452 aa16.61■□□□□ 0.25
SREK1-216ENST00000612404 RUNX2Q13950 521 aa16.61■□□□□ 0.25
SREK1-216ENST00000612404 FAM53BQ14153 422 aa16.61■□□□□ 0.25
SREK1-216ENST00000612404 TLR1Q15399 786 aa16.61■□□□□ 0.25
SREK1-216ENST00000612404 TRIP6Q15654 476 aaKnown RBP16.61■□□□□ 0.25
SREK1-216ENST00000612404 PAGE3Q5JUK9 113 aa16.61■□□□□ 0.25
SREK1-216ENST00000612404 PRAMEF17Q5VTA0 474 aa16.61■□□□□ 0.25
SREK1-216ENST00000612404 ANKRD46Q86W74 232 aa16.61■□□□□ 0.25
SREK1-216ENST00000612404 OR5T3Q8NGG3 340 aa16.61■□□□□ 0.25
SREK1-216ENST00000612404 NDC1Q9BTX1 674 aa16.61■□□□□ 0.25
SREK1-216ENST00000612404 DUSP26Q9BV47 211 aa16.61■□□□□ 0.25
SREK1-216ENST00000612404 CUTCQ9NTM9 273 aa16.61■□□□□ 0.25
SREK1-216ENST00000612404 ATAD3AQ9NVI7 634 aa16.61■□□□□ 0.25
SREK1-216ENST00000612404 C5AR2Q9P296 337 aa16.61■□□□□ 0.25
SREK1-216ENST00000612404 CLCA2Q9UQC9 943 aa16.61■□□□□ 0.25
SREK1-216ENST00000612404 GVINP1Q7Z2Y8 2422 aa16.61■□□□□ 0.25
SREK1-216ENST00000612404 GLOD5A6NK44 160 aa16.6■□□□□ 0.25
SREK1-216ENST00000612404 H3BMH7 237 aa16.6■□□□□ 0.25
SREK1-216ENST00000612404 PRKRAO75569 313 aaKnown RBP16.6■□□□□ 0.25
SREK1-216ENST00000612404 ATXN8OSP0DMR3 200 aa16.6■□□□□ 0.25
SREK1-216ENST00000612404 ITGAXP20702 1163 aa16.6■□□□□ 0.25
SREK1-216ENST00000612404 ALAS2P22557 587 aa16.6■□□□□ 0.25
SREK1-216ENST00000612404 PDX1P52945 283 aa16.6■□□□□ 0.25
SREK1-216ENST00000612404 LIM2P55344 173 aa16.6■□□□□ 0.25
SREK1-216ENST00000612404 PDE7AQ13946 482 aa16.6■□□□□ 0.25
SREK1-216ENST00000612404 C16orf72Q14CZ0 275 aa16.6■□□□□ 0.25
SREK1-216ENST00000612404 FAM214AQ32MH5 1076 aa16.6■□□□□ 0.25
SREK1-216ENST00000612404 ZNF385BQ569K4 471 aa16.6■□□□□ 0.25
SREK1-216ENST00000612404 C6orf10Q5SRN2 563 aa16.6■□□□□ 0.25
SREK1-216ENST00000612404 TLDC1Q6P9B6 456 aa16.6■□□□□ 0.25
SREK1-216ENST00000612404 TTLL10Q6ZVT0 673 aa16.6■□□□□ 0.25
SREK1-216ENST00000612404 ASCL5Q7RTU5 278 aa16.6■□□□□ 0.25
SREK1-216ENST00000612404 PIP4P1Q86T03 277 aa16.6■□□□□ 0.25
SREK1-216ENST00000612404 DSELQ8IZU8 1212 aa16.6■□□□□ 0.25
SREK1-216ENST00000612404 METTL27Q8N6F8 245 aaPredicted RBP16.6■□□□□ 0.25
SREK1-216ENST00000612404 OR8J2Q8NGG1 315 aa16.6■□□□□ 0.25
SREK1-216ENST00000612404 MTERF3Q96E29 417 aa16.6■□□□□ 0.25
SREK1-216ENST00000612404 LRMDAQ9H2I8 198 aa16.6■□□□□ 0.25
SREK1-216ENST00000612404 ACTR5Q9H9F9 607 aaPredicted RBP16.6■□□□□ 0.25
SREK1-216ENST00000612404 MAP10Q9P2G4 905 aa16.6■□□□□ 0.25
SREK1-216ENST00000612404 NDOR1Q9UHB4 597 aa16.6■□□□□ 0.25
SREK1-216ENST00000612404 PHF11Q9UIL8 331 aa16.6■□□□□ 0.25
SREK1-216ENST00000612404 DAPP1Q9UN19 280 aa16.6■□□□□ 0.25
SREK1-216ENST00000612404 PCNX2A6NKB5 2137 aa16.6■□□□□ 0.25
SREK1-216ENST00000612404 PROM1O43490 865 aa16.6■□□□□ 0.25
SREK1-216ENST00000612404 FOXS1O43638 330 aa16.6■□□□□ 0.25
SREK1-216ENST00000612404 AIFM1O95831 613 aa16.6■□□□□ 0.25
SREK1-216ENST00000612404 DRD2P14416 443 aa16.6■□□□□ 0.25
SREK1-216ENST00000612404 EFNA1P20827 205 aaPredicted RBP16.6■□□□□ 0.25
SREK1-216ENST00000612404 CPN2P22792 545 aa16.6■□□□□ 0.25
SREK1-216ENST00000612404 CPOXP36551 454 aa16.6■□□□□ 0.25
SREK1-216ENST00000612404 E2F1Q01094 437 aa16.6■□□□□ 0.25
SREK1-216ENST00000612404 NFYCQ13952 458 aa16.6■□□□□ 0.25
SREK1-216ENST00000612404 COQ5Q5HYK3 327 aa16.6■□□□□ 0.25
SREK1-216ENST00000612404 C18orf63Q68DL7 685 aa16.6■□□□□ 0.25
SREK1-216ENST00000612404 FAM180BQ6P0A1 224 aa16.6■□□□□ 0.25
SREK1-216ENST00000612404 AGBL5Q8NDL9 886 aa16.6■□□□□ 0.25
SREK1-216ENST00000612404 UCN3Q969E3 161 aa16.6■□□□□ 0.25
SREK1-216ENST00000612404 COQ8BQ96D53 544 aa16.6■□□□□ 0.25
SREK1-216ENST00000612404 MMABQ96EY8 250 aaPredicted RBP16.6■□□□□ 0.25
SREK1-216ENST00000612404 C1orf21Q9H246 121 aa16.6■□□□□ 0.25
SREK1-216ENST00000612404 RMND5AQ9H871 391 aa16.6■□□□□ 0.25
SREK1-216ENST00000612404 OCIAD1Q9NX40 245 aa16.6■□□□□ 0.25
SREK1-216ENST00000612404 EFCAB7A8K855 629 aa16.59■□□□□ 0.25
SREK1-216ENST00000612404 ZNF749O43361 778 aa16.59■□□□□ 0.25
SREK1-216ENST00000612404 HYAL3O43820 417 aaPredicted RBP16.59■□□□□ 0.25
SREK1-216ENST00000612404 BUD31P41223 144 aaPredicted RBP16.59■□□□□ 0.25
SREK1-216ENST00000612404 AVPR1BP47901 424 aa16.59■□□□□ 0.25
SREK1-216ENST00000612404 EMP3P54852 163 aa16.59■□□□□ 0.25
SREK1-216ENST00000612404 ACTN3Q08043 901 aaPredicted RBP16.59■□□□□ 0.25
SREK1-216ENST00000612404 ASRGL1Q7L266 308 aa16.59■□□□□ 0.25
SREK1-216ENST00000612404 CAMKMTQ7Z624 323 aa16.59■□□□□ 0.25
SREK1-216ENST00000612404 DEFB107AQ8IZN7 70 aa16.59■□□□□ 0.25
SREK1-216ENST00000612404 DEFB124Q8NES8 71 aa16.59■□□□□ 0.25
SREK1-216ENST00000612404 RNF31Q96EP0 1072 aa16.59■□□□□ 0.25
SREK1-216ENST00000612404 LYRM4Q9HD34 91 aa16.59■□□□□ 0.25
SREK1-216ENST00000612404 KCMF1Q9P0J7 381 aa16.59■□□□□ 0.25
SREK1-216ENST00000612404 HCN3Q9P1Z3 774 aa16.59■□□□□ 0.25
SREK1-216ENST00000612404 DHCR7Q9UBM7 475 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms