RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 PLD6Q8N2A8 252 aaKnown RBP11.57□□□□□ -0.56
CBWD3-208ENST00000612050 BCORP1Q8N888 145 aa11.57□□□□□ -0.56
CBWD3-208ENST00000612050 ACOT4Q8N9L9 421 aa11.57□□□□□ -0.56
CBWD3-208ENST00000612050 DAZLQ92904 295 aaKnown RBP11.57□□□□□ -0.56
CBWD3-208ENST00000612050 CCDC126Q96EE4 140 aa11.57□□□□□ -0.56
CBWD3-208ENST00000612050 C5orf34Q96MH7 638 aa11.57□□□□□ -0.56
CBWD3-208ENST00000612050 GPR78Q96P69 363 aa11.57□□□□□ -0.56
CBWD3-208ENST00000612050 MTERF1Q99551 399 aaKnown RBP11.57□□□□□ -0.56
CBWD3-208ENST00000612050 SERPINI1Q99574 410 aa11.57□□□□□ -0.56
CBWD3-208ENST00000612050 MESP1Q9BRJ9 268 aa11.57□□□□□ -0.56
CBWD3-208ENST00000612050 DEFB126Q9BYW3 111 aa11.57□□□□□ -0.56
CBWD3-208ENST00000612050 ELOVL6Q9H5J4 265 aa11.57□□□□□ -0.56
CBWD3-208ENST00000612050 NOL11Q9H8H0 719 aaKnown RBP11.57□□□□□ -0.56
CBWD3-208ENST00000612050 ADAP2Q9NPF8 381 aa11.57□□□□□ -0.56
CBWD3-208ENST00000612050 PNO1Q9NRX1 252 aaKnown RBP11.57□□□□□ -0.56
CBWD3-208ENST00000612050 TBK1Q9UHD2 729 aa11.57□□□□□ -0.56
CBWD3-208ENST00000612050 SNX6Q9UNH7 406 aa11.57□□□□□ -0.56
CBWD3-208ENST00000612050 ASB1Q9Y576 335 aa11.57□□□□□ -0.56
CBWD3-208ENST00000612050 BOD1L1Q8NFC6 3051 aa11.57□□□□□ -0.56
CBWD3-208ENST00000612050 FASNP49327 2511 aaKnown RBP11.57□□□□□ -0.56
CBWD3-208ENST00000612050 SCN2AQ99250 2005 aa11.57□□□□□ -0.56
CBWD3-208ENST00000612050 OR2W5A6NFC9 320 aa11.56□□□□□ -0.56
CBWD3-208ENST00000612050 A8MUA0 341 aa11.56□□□□□ -0.56
CBWD3-208ENST00000612050 FAM227AF5H4B4 570 aa11.56□□□□□ -0.56
CBWD3-208ENST00000612050 CTNSO60931 367 aa11.56□□□□□ -0.56
CBWD3-208ENST00000612050 GLRA3O75311 464 aa11.56□□□□□ -0.56
CBWD3-208ENST00000612050 SH3BGRLO75368 114 aa11.56□□□□□ -0.56
CBWD3-208ENST00000612050 MYO1DO94832 1006 aa11.56□□□□□ -0.56
CBWD3-208ENST00000612050 RASAL1O95294 804 aa11.56□□□□□ -0.56
CBWD3-208ENST00000612050 SIX3O95343 332 aaPredicted RBP11.56□□□□□ -0.56
CBWD3-208ENST00000612050 WDPCPO95876 746 aa11.56□□□□□ -0.56
CBWD3-208ENST00000612050 CD46P15529 392 aa11.56□□□□□ -0.56
CBWD3-208ENST00000612050 EPORP19235 508 aa11.56□□□□□ -0.56
CBWD3-208ENST00000612050 ATP5A1P25705 553 aaKnown RBP11.56□□□□□ -0.56
CBWD3-208ENST00000612050 TNFRSF8P28908 595 aa11.56□□□□□ -0.56
CBWD3-208ENST00000612050 TNFSF10P50591 281 aa11.56□□□□□ -0.56
CBWD3-208ENST00000612050 NAA20P61599 178 aa11.56□□□□□ -0.56
CBWD3-208ENST00000612050 SNRPNP63162 240 aaKnown RBP11.56□□□□□ -0.56
CBWD3-208ENST00000612050 CUL3Q13618 768 aa11.56□□□□□ -0.56
CBWD3-208ENST00000612050 RUNX2Q13950 521 aa11.56□□□□□ -0.56
CBWD3-208ENST00000612050 UBAP2Q5T6F2 1119 aaKnown RBP11.56□□□□□ -0.56
CBWD3-208ENST00000612050 PAGE2Q7Z2X7 111 aa11.56□□□□□ -0.56
CBWD3-208ENST00000612050 VN1R5Q7Z5H4 357 aa11.56□□□□□ -0.56
CBWD3-208ENST00000612050 RPS19BP1Q86WX3 136 aaKnown RBP11.56□□□□□ -0.56
CBWD3-208ENST00000612050 NUDT13Q86X67 352 aa11.56□□□□□ -0.56
CBWD3-208ENST00000612050 FAM26EQ8N5C1 309 aa11.56□□□□□ -0.56
CBWD3-208ENST00000612050 L3MBTL4Q8NA19 623 aa11.56□□□□□ -0.56
CBWD3-208ENST00000612050 TMEM178AQ8NBL3 297 aa11.56□□□□□ -0.56
CBWD3-208ENST00000612050 B3GNT7Q8NFL0 401 aa11.56□□□□□ -0.56
CBWD3-208ENST00000612050 PSMF1Q92530 271 aa11.56□□□□□ -0.56
CBWD3-208ENST00000612050 TMEM125Q96AQ2 219 aa11.56□□□□□ -0.56
CBWD3-208ENST00000612050 VMP1Q96GC9 406 aa11.56□□□□□ -0.56
CBWD3-208ENST00000612050 QRFPRQ96P65 431 aa11.56□□□□□ -0.56
CBWD3-208ENST00000612050 NTMT1Q9BV86 223 aa11.56□□□□□ -0.56
CBWD3-208ENST00000612050 IQCGQ9H095 443 aaKnown RBP11.56□□□□□ -0.56
CBWD3-208ENST00000612050 OR51B5Q9H339 312 aa11.56□□□□□ -0.56
CBWD3-208ENST00000612050 SEMA4BQ9NPR2 832 aaPredicted RBP11.56□□□□□ -0.56
CBWD3-208ENST00000612050 DMRT3Q9NQL9 472 aa11.56□□□□□ -0.56
CBWD3-208ENST00000612050 PRDM7Q9NQW5 492 aa11.56□□□□□ -0.56
CBWD3-208ENST00000612050 ASF1BQ9NVP2 202 aa11.56□□□□□ -0.56
CBWD3-208ENST00000612050 ZNF358Q9NW07 568 aa11.56□□□□□ -0.56
CBWD3-208ENST00000612050 LYARQ9NX58 379 aaKnown RBP11.56□□□□□ -0.56
CBWD3-208ENST00000612050 PSD3Q9NYI0 1048 aa11.56□□□□□ -0.56
CBWD3-208ENST00000612050 PLA2G3Q9NZ20 509 aa11.56□□□□□ -0.56
CBWD3-208ENST00000612050 COPS7AQ9UBW8 275 aa11.56□□□□□ -0.56
CBWD3-208ENST00000612050 FBXW2Q9UKT8 454 aa11.56□□□□□ -0.56
CBWD3-208ENST00000612050 FOXE1O00358 373 aaPredicted RBP11.55□□□□□ -0.56
CBWD3-208ENST00000612050 SAP18O00422 153 aaKnown RBP11.55□□□□□ -0.56
CBWD3-208ENST00000612050 PRAMEF4O60810 478 aa11.55□□□□□ -0.56
CBWD3-208ENST00000612050 PRAMEF2O60811 474 aa11.55□□□□□ -0.56
CBWD3-208ENST00000612050 GUCY1B2O75343 617 aa11.55□□□□□ -0.56
CBWD3-208ENST00000612050 SUPT7LO94864 414 aa11.55□□□□□ -0.56
CBWD3-208ENST00000612050 AGFG2O95081 481 aa11.55□□□□□ -0.56
CBWD3-208ENST00000612050 CELA2AP08217 269 aa11.55□□□□□ -0.56
CBWD3-208ENST00000612050 FAM153BP0C7A2 387 aa11.55□□□□□ -0.56
CBWD3-208ENST00000612050 GNLYP22749 145 aa11.55□□□□□ -0.56
CBWD3-208ENST00000612050 CCT5P48643 541 aa11.55□□□□□ -0.56
CBWD3-208ENST00000612050 RPS13P62277 151 aaKnown RBP11.55□□□□□ -0.56
CBWD3-208ENST00000612050 HERVK_113P63132 956 aa11.55□□□□□ -0.56
CBWD3-208ENST00000612050 IFFO1Q0D2I5 559 aa11.55□□□□□ -0.56
CBWD3-208ENST00000612050 SLAMF1Q13291 335 aa11.55□□□□□ -0.56
CBWD3-208ENST00000612050 UBAP2LQ14157 1087 aaKnown RBP11.55□□□□□ -0.56
CBWD3-208ENST00000612050 NR6A1Q15406 480 aa11.55□□□□□ -0.56
CBWD3-208ENST00000612050 ZRSR2Q15696 482 aaKnown RBP11.55□□□□□ -0.56
CBWD3-208ENST00000612050 ELAVL1Q15717 326 aaKnown RBP11.55□□□□□ -0.56
CBWD3-208ENST00000612050 FAM153CQ494X1 144 aa11.55□□□□□ -0.56
CBWD3-208ENST00000612050 C6orf163Q5TEZ5 329 aa11.55□□□□□ -0.56
CBWD3-208ENST00000612050 PRAMEF9Q5VWM5 478 aa11.55□□□□□ -0.56
CBWD3-208ENST00000612050 H3F3CQ6NXT2 135 aa11.55□□□□□ -0.56
CBWD3-208ENST00000612050 CRLF3Q8IUI8 442 aa11.55□□□□□ -0.56
CBWD3-208ENST00000612050 GSPT2Q8IYD1 628 aaKnown RBP11.55□□□□□ -0.56
CBWD3-208ENST00000612050 CCDC63Q8NA47 563 aa11.55□□□□□ -0.56
CBWD3-208ENST00000612050 OR14A16Q8NHC5 309 aa11.55□□□□□ -0.56
CBWD3-208ENST00000612050 ART5Q96L15 291 aa11.55□□□□□ -0.56
CBWD3-208ENST00000612050 PELOQ9BRX2 385 aaKnown RBP11.55□□□□□ -0.56
CBWD3-208ENST00000612050 ERVK-6Q9BXR3 956 aa11.55□□□□□ -0.56
CBWD3-208ENST00000612050 NECTIN3Q9NQS3 549 aa11.55□□□□□ -0.56
CBWD3-208ENST00000612050 OLAHQ9NV23 265 aa11.55□□□□□ -0.56
CBWD3-208ENST00000612050 MID2Q9UJV3 735 aa11.55□□□□□ -0.56
CBWD3-208ENST00000612050 PCTPQ9UKL6 214 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms