RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 LINC00032P0C843 101 aa15.3■□□□□ 0.04
RTN1-209ENST00000611068 MMP12P39900 470 aa15.3■□□□□ 0.04
RTN1-209ENST00000611068 POU4F3Q15319 338 aa15.3■□□□□ 0.04
RTN1-209ENST00000611068 ZBTB37Q5TC79 503 aa15.3■□□□□ 0.04
RTN1-209ENST00000611068 TMEM184AQ6ZMB5 413 aa15.3■□□□□ 0.04
RTN1-209ENST00000611068 C16orf62Q7Z3J2 963 aa15.3■□□□□ 0.04
RTN1-209ENST00000611068 RHEBL1Q8TAI7 183 aa15.3■□□□□ 0.04
RTN1-209ENST00000611068 RAPGEFL1Q9UHV5 662 aa15.3■□□□□ 0.04
RTN1-209ENST00000611068 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.3■□□□□ 0.04
RTN1-209ENST00000611068 PRKAB1Q9Y478 270 aa15.3■□□□□ 0.04
RTN1-209ENST00000611068 PCDHB14Q9Y5E9 798 aa15.3■□□□□ 0.04
RTN1-209ENST00000611068 PCDHGB2Q9Y5G2 931 aa15.3■□□□□ 0.04
RTN1-209ENST00000611068 HSPE1-MOB4S4R3N1 261 aa15.3■□□□□ 0.04
RTN1-209ENST00000611068 NUMA1Q14980 2115 aa15.29■□□□□ 0.04
RTN1-209ENST00000611068 A0A0B4J203 849 aa15.29■□□□□ 0.04
RTN1-209ENST00000611068 OR2A25A4D2G3 310 aa15.29■□□□□ 0.04
RTN1-209ENST00000611068 UGT2B17O75795 530 aa15.29■□□□□ 0.04
RTN1-209ENST00000611068 CSF2P04141 144 aa15.29■□□□□ 0.04
RTN1-209ENST00000611068 PRNPP04156 253 aa15.29■□□□□ 0.04
RTN1-209ENST00000611068 UMPSP11172 480 aa15.29■□□□□ 0.04
RTN1-209ENST00000611068 HOXB3P14651 431 aaPredicted RBP15.29■□□□□ 0.04
RTN1-209ENST00000611068 HSPA7P48741 367 aa15.29■□□□□ 0.04
RTN1-209ENST00000611068 CTSCP53634 463 aa15.29■□□□□ 0.04
RTN1-209ENST00000611068 UGT2B15P54855 530 aa15.29■□□□□ 0.04
RTN1-209ENST00000611068 CNTN1Q12860 1018 aa15.29■□□□□ 0.04
RTN1-209ENST00000611068 SULT1C3Q6IMI6 304 aa15.29■□□□□ 0.04
RTN1-209ENST00000611068 FIP1L1Q6UN15 594 aaKnown RBP15.29■□□□□ 0.04
RTN1-209ENST00000611068 SBSNQ6UWP8 590 aa15.29■□□□□ 0.04
RTN1-209ENST00000611068 OR52B6Q8NGF0 335 aa15.29■□□□□ 0.04
RTN1-209ENST00000611068 SLC22A8Q8TCC7 542 aa15.29■□□□□ 0.04
RTN1-209ENST00000611068 KCNS3Q9BQ31 491 aa15.29■□□□□ 0.04
RTN1-209ENST00000611068 SEC22CQ9BRL7 303 aa15.29■□□□□ 0.04
RTN1-209ENST00000611068 EML4Q9HC35 981 aaKnown RBP15.29■□□□□ 0.04
RTN1-209ENST00000611068 SERGEFQ9UGK8 458 aa15.29■□□□□ 0.04
RTN1-209ENST00000611068 UTS2RQ9UKP6 389 aa15.29■□□□□ 0.04
RTN1-209ENST00000611068 LYVE1Q9Y5Y7 322 aa15.29■□□□□ 0.04
RTN1-209ENST00000611068 DOCK9Q9BZ29 2069 aa15.29■□□□□ 0.04
RTN1-209ENST00000611068 BTN3A3O00478 584 aa15.29■□□□□ 0.04
RTN1-209ENST00000611068 HS6ST1O60243 411 aa15.29■□□□□ 0.04
RTN1-209ENST00000611068 RNGTTO60942 597 aaKnown RBP15.29■□□□□ 0.04
RTN1-209ENST00000611068 RECQL5O94762 991 aaPredicted RBP15.29■□□□□ 0.04
RTN1-209ENST00000611068 PROS1P07225 676 aa15.29■□□□□ 0.04
RTN1-209ENST00000611068 ATP1B2P14415 290 aaPredicted RBP15.29■□□□□ 0.04
RTN1-209ENST00000611068 PIK3CGP48736 1102 aa15.29■□□□□ 0.04
RTN1-209ENST00000611068 DAB2P98082 770 aa15.29■□□□□ 0.04
RTN1-209ENST00000611068 ELAVL3Q14576 367 aaKnown RBP15.29■□□□□ 0.04
RTN1-209ENST00000611068 AANATQ16613 207 aa15.29■□□□□ 0.04
RTN1-209ENST00000611068 ITPRIPL2Q3MIP1 535 aa15.29■□□□□ 0.04
RTN1-209ENST00000611068 PRMT9Q6P2P2 845 aa15.29■□□□□ 0.04
RTN1-209ENST00000611068 COMMD7Q86VX2 200 aa15.29■□□□□ 0.04
RTN1-209ENST00000611068 PTRH1Q86Y79 214 aaKnown RBP15.29■□□□□ 0.04
RTN1-209ENST00000611068 UBE2J2Q8N2K1 259 aa15.29■□□□□ 0.04
RTN1-209ENST00000611068 FAM86B1Q8N7N1 296 aa15.29■□□□□ 0.04
RTN1-209ENST00000611068 PJA1Q8NG27 643 aa15.29■□□□□ 0.04
RTN1-209ENST00000611068 L3HYPDHQ96EM0 354 aa15.29■□□□□ 0.04
RTN1-209ENST00000611068 APOL4Q9BPW4 351 aa15.29■□□□□ 0.04
RTN1-209ENST00000611068 PPA2Q9H2U2 334 aa15.29■□□□□ 0.04
RTN1-209ENST00000611068 CARS2Q9HA77 564 aaKnown RBP15.29■□□□□ 0.04
RTN1-209ENST00000611068 DYRK4Q9NR20 520 aa15.29■□□□□ 0.04
RTN1-209ENST00000611068 CCDC59Q9P031 241 aaKnown RBP15.29■□□□□ 0.04
RTN1-209ENST00000611068 CYB5R1Q9UHQ9 305 aa15.29■□□□□ 0.04
RTN1-209ENST00000611068 SNX8Q9Y5X2 465 aa15.29■□□□□ 0.04
RTN1-209ENST00000611068 PEX16Q9Y5Y5 336 aa15.29■□□□□ 0.04
RTN1-209ENST00000611068 STON1Q9Y6Q2 735 aa15.29■□□□□ 0.04
RTN1-209ENST00000611068 MID1O15344 667 aa15.28■□□□□ 0.04
RTN1-209ENST00000611068 LZTS3O60299 673 aaPredicted RBP15.28■□□□□ 0.04
RTN1-209ENST00000611068 CRCPO75575 148 aa15.28■□□□□ 0.04
RTN1-209ENST00000611068 ADRB3P13945 408 aa15.28■□□□□ 0.04
RTN1-209ENST00000611068 HOXB1P14653 301 aaPredicted RBP15.28■□□□□ 0.04
RTN1-209ENST00000611068 CD72P21854 359 aa15.28■□□□□ 0.04
RTN1-209ENST00000611068 MYL9P24844 172 aa15.28■□□□□ 0.04
RTN1-209ENST00000611068 OR4D2P58180 307 aa15.28■□□□□ 0.04
RTN1-209ENST00000611068 HOXC5Q00444 222 aa15.28■□□□□ 0.04
RTN1-209ENST00000611068 ZNF284Q2VY69 593 aa15.28■□□□□ 0.04
RTN1-209ENST00000611068 FAM209BQ5JX69 171 aa15.28■□□□□ 0.04
RTN1-209ENST00000611068 KIAA1211LQ6NV74 962 aa15.28■□□□□ 0.04
RTN1-209ENST00000611068 SPESP1Q6UW49 350 aa15.28■□□□□ 0.04
RTN1-209ENST00000611068 ZNF540Q8NDQ6 660 aa15.28■□□□□ 0.04
RTN1-209ENST00000611068 SLC38A4Q969I6 547 aa15.28■□□□□ 0.04
RTN1-209ENST00000611068 ZNF566Q969W8 418 aa15.28■□□□□ 0.04
RTN1-209ENST00000611068 TTYH1Q9H313 450 aaPredicted RBP15.28■□□□□ 0.04
RTN1-209ENST00000611068 SLAMF8Q9P0V8 285 aa15.28■□□□□ 0.04
RTN1-209ENST00000611068 DNAJC15Q9Y5T4 150 aa15.28■□□□□ 0.04
RTN1-209ENST00000611068 WNT9AO14904 365 aa15.28■□□□□ 0.04
RTN1-209ENST00000611068 HPRP00739 348 aa15.28■□□□□ 0.04
RTN1-209ENST00000611068 C1QBP02746 253 aa15.28■□□□□ 0.04
RTN1-209ENST00000611068 P2RY2P41231 377 aa15.28■□□□□ 0.04
RTN1-209ENST00000611068 PREPP48147 710 aa15.28■□□□□ 0.04
RTN1-209ENST00000611068 MAP2K6P52564 334 aa15.28■□□□□ 0.04
RTN1-209ENST00000611068 RGS1Q08116 209 aa15.28■□□□□ 0.04
RTN1-209ENST00000611068 CYP27C1Q4G0S4 372 aa15.28■□□□□ 0.04
RTN1-209ENST00000611068 MACC1Q6ZN28 852 aa15.28■□□□□ 0.04
RTN1-209ENST00000611068 LARP4Q71RC2 724 aaKnown RBP eCLIP15.28■□□□□ 0.04
RTN1-209ENST00000611068 DPPA4Q7L190 304 aa15.28■□□□□ 0.04
RTN1-209ENST00000611068 LMNTD1Q8N9Z9 388 aa15.28■□□□□ 0.04
RTN1-209ENST00000611068 FANK1Q8TC84 345 aa15.28■□□□□ 0.04
RTN1-209ENST00000611068 ZNF578Q96N58 590 aaPredicted RBP15.28■□□□□ 0.04
RTN1-209ENST00000611068 MYO15AQ9UKN7 3530 aa15.28■□□□□ 0.04
RTN1-209ENST00000611068 RNF6Q9Y252 685 aa15.28■□□□□ 0.04
RTN1-209ENST00000611068 NDUFAF1Q9Y375 327 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms