RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 IGLV3-22A0A075B6J6 115 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 F5H0A9 414 aaPredicted RBP12.61□□□□□ -0.39
USP6NL-205ENST00000609104 CELP19835 753 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 NDUFS1P28331 727 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 C22orf42Q6IC83 251 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 DMAC2Q9NW81 257 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 A0A1B0GV50 99 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 TRAM2Q15035 370 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 COL28A1Q2UY09 1125 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 NKAPLQ5M9Q1 402 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 ZNF584Q8IVC4 421 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 SLC35B2Q8TB61 432 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 AUTS2Q8WXX7 1259 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 TFGQ92734 400 aaPredicted RBP12.61□□□□□ -0.39
USP6NL-205ENST00000609104 C16orf58Q96GQ5 468 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 MUS81Q96NY9 551 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 RBCK1Q9BYM8 510 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 SOX17Q9H6I2 414 aaPredicted RBP12.61□□□□□ -0.39
USP6NL-205ENST00000609104 FOXD2O60548 495 aaPredicted RBP12.61□□□□□ -0.39
USP6NL-205ENST00000609104 CDNFQ49AH0 187 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 REEP3Q6NUK4 255 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 FBXL22Q6P050 247 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 CEACAM19Q7Z692 300 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 FAXDC2Q96IV6 333 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 MSLNLQ96KJ4 702 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 PAK1IP1Q9NWT1 392 aaPredicted RBP12.61□□□□□ -0.39
USP6NL-205ENST00000609104 SPATA31D1Q6ZQQ2 1576 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 HTRA2O43464 458 aaPredicted RBP12.61□□□□□ -0.39
USP6NL-205ENST00000609104 GKN3PP0CG01 181 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 NRIP1P48552 1158 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 GHRHRQ02643 423 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 PTCHD3Q3KNS1 767 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 PEX13Q92968 403 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 TMEM9Q9P0T7 183 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 PEAK1Q9H792 1746 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 INMT-MINDY4F8WBC2 141 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 PLD2O14939 933 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 GID4Q8IVV7 300 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 PLD6Q8N2A8 252 aaKnown RBP12.61□□□□□ -0.39
USP6NL-205ENST00000609104 METTL27Q8N6F8 245 aaPredicted RBP12.61□□□□□ -0.39
USP6NL-205ENST00000609104 MAN2C1Q9NTJ4 1040 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 MYLK3Q32MK0 819 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 CARD17Q5XLA6 110 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 HMGN2P46Q86SG4 172 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 GATSQ8NAP1 163 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 TMEM246Q9BRR3 403 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 HOXD8P13378 290 aaPredicted RBP12.61□□□□□ -0.39
USP6NL-205ENST00000609104 KCNN1Q92952 543 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 RFPL1O75677 317 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 ARSFP54793 590 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 BRAT1Q6PJG6 821 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 ZNF367Q7RTV3 350 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 TP63Q9H3D4 680 aaPredicted RBP12.61□□□□□ -0.39
USP6NL-205ENST00000609104 SNAP29O95721 258 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 PPIGQ13427 754 aaKnown RBP eCLIP12.61□□□□□ -0.39
USP6NL-205ENST00000609104 NANOGP8Q6NSW7 305 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 LMX1AQ8TE12 382 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 NANOGQ9H9S0 305 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 GIMAP2Q9UG22 337 aa12.61□□□□□ -0.39
USP6NL-205ENST00000609104 FMN2Q9NZ56 1722 aa12.6□□□□□ -0.39
USP6NL-205ENST00000609104 SLC25A11Q02978 314 aaKnown RBP12.6□□□□□ -0.39
USP6NL-205ENST00000609104 PPP2R2DQ66LE6 453 aa12.6□□□□□ -0.39
USP6NL-205ENST00000609104 PFDN5Q99471 154 aa12.6□□□□□ -0.39
USP6NL-205ENST00000609104 MMP27Q9H306 513 aa12.6□□□□□ -0.39
USP6NL-205ENST00000609104 TMEM184CQ9NVA4 438 aa12.6□□□□□ -0.39
USP6NL-205ENST00000609104 DLGAP4Q9Y2H0 992 aa12.6□□□□□ -0.39
USP6NL-205ENST00000609104 PIM1P11309 404 aaPredicted RBP12.6□□□□□ -0.39
USP6NL-205ENST00000609104 LSSP48449 732 aa12.6□□□□□ -0.39
USP6NL-205ENST00000609104 PIGGQ5H8A4 983 aa12.6□□□□□ -0.39
USP6NL-205ENST00000609104 LBX2Q6XYB7 198 aa12.6□□□□□ -0.39
USP6NL-205ENST00000609104 C12orf40Q86WS4 652 aa12.6□□□□□ -0.39
USP6NL-205ENST00000609104 NTAN1Q96AB6 310 aa12.6□□□□□ -0.39
USP6NL-205ENST00000609104 RAD9AQ99638 391 aa12.6□□□□□ -0.39
USP6NL-205ENST00000609104 ZNF792Q3KQV3 632 aa12.6□□□□□ -0.39
USP6NL-205ENST00000609104 POLDIP3Q9BY77 421 aaKnown RBP12.6□□□□□ -0.39
USP6NL-205ENST00000609104 TAS2R9Q9NYW1 312 aa12.6□□□□□ -0.39
USP6NL-205ENST00000609104 KRBOX4Q5JUW0 171 aa12.6□□□□□ -0.39
USP6NL-205ENST00000609104 CARM1Q86X55 608 aa12.6□□□□□ -0.39
USP6NL-205ENST00000609104 ZSCAN1Q8NBB4 408 aa12.6□□□□□ -0.39
USP6NL-205ENST00000609104 ZNF420Q8TAQ5 688 aaPredicted RBP12.6□□□□□ -0.39
USP6NL-205ENST00000609104 THAP4Q8WY91 577 aa12.6□□□□□ -0.39
USP6NL-205ENST00000609104 FN3KQ9H479 309 aa12.6□□□□□ -0.39
USP6NL-205ENST00000609104 SARDHQ9UL12 918 aa12.6□□□□□ -0.39
USP6NL-205ENST00000609104 SCML2Q9UQR0 700 aa12.6□□□□□ -0.39
USP6NL-205ENST00000609104 UGT2B10P36537 528 aa12.6□□□□□ -0.39
USP6NL-205ENST00000609104 ITPRIPL2Q3MIP1 535 aa12.6□□□□□ -0.39
USP6NL-205ENST00000609104 PXYLP1Q8TE99 480 aa12.6□□□□□ -0.39
USP6NL-205ENST00000609104 WRAP73Q9P2S5 460 aaPredicted RBP12.6□□□□□ -0.39
USP6NL-205ENST00000609104 LCHNA4D1U4 455 aa12.6□□□□□ -0.39
USP6NL-205ENST00000609104 KCNQ1P51787 676 aa12.6□□□□□ -0.39
USP6NL-205ENST00000609104 LRIT3Q3SXY7 679 aa12.6□□□□□ -0.39
USP6NL-205ENST00000609104 KIAA1191Q96A73 305 aa12.6□□□□□ -0.39
USP6NL-205ENST00000609104 FUBP3Q96I24 572 aaKnown RBP eCLIP12.6□□□□□ -0.393e-6■□□□□ 10.3
USP6NL-205ENST00000609104 NSUN3Q9H649 340 aaKnown RBP12.6□□□□□ -0.39
USP6NL-205ENST00000609104 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.6□□□□□ -0.39
USP6NL-205ENST00000609104 GABRA3P34903 492 aa12.6□□□□□ -0.39
USP6NL-205ENST00000609104 ACVR1BP36896 505 aa12.6□□□□□ -0.39
USP6NL-205ENST00000609104 MEF2AQ02078 507 aaPredicted RBP12.6□□□□□ -0.39
USP6NL-205ENST00000609104 GINS1Q14691 196 aa12.6□□□□□ -0.39
USP6NL-205ENST00000609104 ZSWIM9Q86XI8 627 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms