RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 KCNJ9Q92806 393 aa10.87□□□□□ -0.67
PDLIM1P1-201ENST00000604187 GPR21Q99679 349 aa10.87□□□□□ -0.67
PDLIM1P1-201ENST00000604187 SLC6A15Q9H2J7 730 aa10.87□□□□□ -0.67
PDLIM1P1-201ENST00000604187 ZNF703Q9H7S9 590 aaPredicted RBP10.87□□□□□ -0.67
PDLIM1P1-201ENST00000604187 CLK4Q9HAZ1 481 aaKnown RBP10.87□□□□□ -0.67
PDLIM1P1-201ENST00000604187 EIF2B3Q9NR50 452 aaKnown RBP10.87□□□□□ -0.67
PDLIM1P1-201ENST00000604187 KLHL42Q9P2K6 505 aa10.87□□□□□ -0.67
PDLIM1P1-201ENST00000604187 ZFP69BQ9UJL9 534 aa10.87□□□□□ -0.67
PDLIM1P1-201ENST00000604187 PACSIN2Q9UNF0 486 aaPredicted RBP10.87□□□□□ -0.67
PDLIM1P1-201ENST00000604187 ATG4BQ9Y4P1 393 aa10.87□□□□□ -0.67
PDLIM1P1-201ENST00000604187 SONP18583 2426 aaKnown RBP10.87□□□□□ -0.67
PDLIM1P1-201ENST00000604187 ANK2Q01484 3957 aa10.87□□□□□ -0.67
PDLIM1P1-201ENST00000604187 ZNF407Q9C0G0 2248 aa10.86□□□□□ -0.67
PDLIM1P1-201ENST00000604187 RNF212BA8MTL3 300 aa10.86□□□□□ -0.67
PDLIM1P1-201ENST00000604187 C4orf51C9J302 202 aa10.86□□□□□ -0.67
PDLIM1P1-201ENST00000604187 TGFBR3LH3BV60 316 aa10.86□□□□□ -0.67
PDLIM1P1-201ENST00000604187 P04436 131 aa10.86□□□□□ -0.67
PDLIM1P1-201ENST00000604187 CEACAM8P31997 349 aaPredicted RBP10.86□□□□□ -0.67
PDLIM1P1-201ENST00000604187 PIGAP37287 484 aa10.86□□□□□ -0.67
PDLIM1P1-201ENST00000604187 SCTRP47872 440 aa10.86□□□□□ -0.67
PDLIM1P1-201ENST00000604187 NPY2RP49146 381 aa10.86□□□□□ -0.67
PDLIM1P1-201ENST00000604187 HK2P52789 917 aa10.86□□□□□ -0.67
PDLIM1P1-201ENST00000604187 SLC13A2Q13183 592 aa10.86□□□□□ -0.67
PDLIM1P1-201ENST00000604187 BMPR2Q13873 1038 aa10.86□□□□□ -0.67
PDLIM1P1-201ENST00000604187 CATSPEREQ5SY80 951 aa10.86□□□□□ -0.67
PDLIM1P1-201ENST00000604187 KIAA0930Q6ICG6 404 aaPredicted RBP10.86□□□□□ -0.67
PDLIM1P1-201ENST00000604187 NEPROQ6NW34 567 aa10.86□□□□□ -0.67
PDLIM1P1-201ENST00000604187 YTHDF3Q7Z739 585 aaKnown RBP10.86□□□□□ -0.67
PDLIM1P1-201ENST00000604187 STRA8Q7Z7C7 330 aa10.86□□□□□ -0.67
PDLIM1P1-201ENST00000604187 OR4K1Q8NGD4 311 aa10.86□□□□□ -0.67
PDLIM1P1-201ENST00000604187 CALR3Q96L12 384 aaKnown RBP10.86□□□□□ -0.67
PDLIM1P1-201ENST00000604187 SGCZQ96LD1 299 aa10.86□□□□□ -0.67
PDLIM1P1-201ENST00000604187 HAUS8Q9BT25 410 aa10.86□□□□□ -0.67
PDLIM1P1-201ENST00000604187 BDH2Q9BUT1 245 aa10.86□□□□□ -0.67
PDLIM1P1-201ENST00000604187 CCDC68Q9H2F9 335 aa10.86□□□□□ -0.67
PDLIM1P1-201ENST00000604187 SPNS1Q9H2V7 528 aa10.86□□□□□ -0.67
PDLIM1P1-201ENST00000604187 INTS10Q9NVR2 710 aaKnown RBP10.86□□□□□ -0.67
PDLIM1P1-201ENST00000604187 PAK5Q9P286 719 aa10.86□□□□□ -0.67
PDLIM1P1-201ENST00000604187 ZNF629Q9UEG4 869 aaPredicted RBP10.86□□□□□ -0.67
PDLIM1P1-201ENST00000604187 PDE10AQ9Y233 779 aa10.86□□□□□ -0.67
PDLIM1P1-201ENST00000604187 PCDHGB3Q9Y5G1 929 aa10.86□□□□□ -0.67
PDLIM1P1-201ENST00000604187 CLDN16Q9Y5I7 305 aa10.86□□□□□ -0.67
PDLIM1P1-201ENST00000604187 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.86□□□□□ -0.67
PDLIM1P1-201ENST00000604187 ANK3Q12955 4377 aaKnown RBP10.85□□□□□ -0.67
PDLIM1P1-201ENST00000604187 CTAGE9A4FU28 777 aa10.85□□□□□ -0.67
PDLIM1P1-201ENST00000604187 ZNF354AO60765 605 aaPredicted RBP10.85□□□□□ -0.67
PDLIM1P1-201ENST00000604187 RFPL3SP0C7P2 107 aa10.85□□□□□ -0.67
PDLIM1P1-201ENST00000604187 RPL22P35268 128 aaKnown RBP10.85□□□□□ -0.67
PDLIM1P1-201ENST00000604187 TRPC1P48995 793 aa10.85□□□□□ -0.67
PDLIM1P1-201ENST00000604187 AGFG1P52594 562 aaKnown RBP10.85□□□□□ -0.67
PDLIM1P1-201ENST00000604187 HNRNPFP52597 415 aaKnown RBP10.85□□□□□ -0.67
PDLIM1P1-201ENST00000604187 ZNF136P52737 540 aa10.85□□□□□ -0.67
PDLIM1P1-201ENST00000604187 KCNJ2P63252 427 aa10.85□□□□□ -0.67
PDLIM1P1-201ENST00000604187 BASP1P80723 227 aaKnown RBP10.85□□□□□ -0.67
PDLIM1P1-201ENST00000604187 CBLBQ13191 982 aa10.85□□□□□ -0.67
PDLIM1P1-201ENST00000604187 CTBP1Q13363 440 aa10.85□□□□□ -0.67
PDLIM1P1-201ENST00000604187 SNX1Q13596 522 aa10.85□□□□□ -0.67
PDLIM1P1-201ENST00000604187 PHKG1Q16816 387 aa10.85□□□□□ -0.67
PDLIM1P1-201ENST00000604187 TOR1AIP1Q5JTV8 583 aa10.85□□□□□ -0.67
PDLIM1P1-201ENST00000604187 OPN5Q6U736 354 aa10.85□□□□□ -0.67
PDLIM1P1-201ENST00000604187 CAPN12Q6ZSI9 719 aa10.85□□□□□ -0.67
PDLIM1P1-201ENST00000604187 PEX26Q7Z412 305 aa10.85□□□□□ -0.67
PDLIM1P1-201ENST00000604187 CLNKQ7Z7G1 428 aa10.85□□□□□ -0.67
PDLIM1P1-201ENST00000604187 LACC1Q8IV20 430 aa10.85□□□□□ -0.67
PDLIM1P1-201ENST00000604187 LRRC75A-AS1Q8N1F1 130 aa10.85□□□□□ -0.67
PDLIM1P1-201ENST00000604187 LIX1Q8N485 282 aa10.85□□□□□ -0.67
PDLIM1P1-201ENST00000604187 FAM47BQ8NA70 645 aa10.85□□□□□ -0.67
PDLIM1P1-201ENST00000604187 C1orf54Q8WWF1 131 aa10.85□□□□□ -0.67
PDLIM1P1-201ENST00000604187 PYCR2Q96C36 320 aa10.85□□□□□ -0.67
PDLIM1P1-201ENST00000604187 SNF8Q96H20 258 aa10.85□□□□□ -0.67
PDLIM1P1-201ENST00000604187 KLHL31Q9H511 634 aa10.85□□□□□ -0.67
PDLIM1P1-201ENST00000604187 ADAP2Q9NPF8 381 aa10.85□□□□□ -0.67
PDLIM1P1-201ENST00000604187 FBXO6Q9NRD1 293 aaPredicted RBP10.85□□□□□ -0.67
PDLIM1P1-201ENST00000604187 PRTFDC1Q9NRG1 225 aa10.85□□□□□ -0.67
PDLIM1P1-201ENST00000604187 SOX13Q9UN79 622 aa10.85□□□□□ -0.67
PDLIM1P1-201ENST00000604187 DHRS7Q9Y394 339 aa10.85□□□□□ -0.67
PDLIM1P1-201ENST00000604187 C15orf38-AP3S2A0A0A6YYH1 394 aa10.84□□□□□ -0.67
PDLIM1P1-201ENST00000604187 URADA6NGE7 173 aa10.84□□□□□ -0.67
PDLIM1P1-201ENST00000604187 LRRC3CA6NJW4 275 aa10.84□□□□□ -0.67
PDLIM1P1-201ENST00000604187 MIF4GDA9UHW6 222 aaKnown RBP10.84□□□□□ -0.67
PDLIM1P1-201ENST00000604187 AP3B1O00203 1094 aa10.84□□□□□ -0.67
PDLIM1P1-201ENST00000604187 CES2O00748 559 aa10.84□□□□□ -0.67
PDLIM1P1-201ENST00000604187 NRDCO43847 1150 aa10.84□□□□□ -0.67
PDLIM1P1-201ENST00000604187 EPPINO95925 133 aa10.84□□□□□ -0.67
PDLIM1P1-201ENST00000604187 FTCDO95954 541 aa10.84□□□□□ -0.67
PDLIM1P1-201ENST00000604187 IL2RAP01589 272 aa10.84□□□□□ -0.67
PDLIM1P1-201ENST00000604187 IFNA16P05015 189 aa10.84□□□□□ -0.67
PDLIM1P1-201ENST00000604187 C8GP07360 202 aa10.84□□□□□ -0.67
PDLIM1P1-201ENST00000604187 TIMP3P35625 211 aa10.84□□□□□ -0.67
PDLIM1P1-201ENST00000604187 HSD17B7P56937 341 aa10.84□□□□□ -0.67
PDLIM1P1-201ENST00000604187 BTN3A2P78410 334 aa10.84□□□□□ -0.67
PDLIM1P1-201ENST00000604187 CCZ1BP86790 482 aa10.84□□□□□ -0.67
PDLIM1P1-201ENST00000604187 CCZ1P86791 482 aaPredicted RBP10.84□□□□□ -0.67
PDLIM1P1-201ENST00000604187 DHX9Q08211 1270 aaKnown RBP10.84□□□□□ -0.67
PDLIM1P1-201ENST00000604187 TBX2Q13207 712 aaPredicted RBP10.84□□□□□ -0.67
PDLIM1P1-201ENST00000604187 SP140Q13342 867 aa10.84□□□□□ -0.67
PDLIM1P1-201ENST00000604187 SIX1Q15475 284 aaPredicted RBP10.84□□□□□ -0.67
PDLIM1P1-201ENST00000604187 ELAVL1Q15717 326 aaKnown RBP10.84□□□□□ -0.67
PDLIM1P1-201ENST00000604187 PRAMEF20Q5VT98 475 aa10.84□□□□□ -0.67
PDLIM1P1-201ENST00000604187 DENND6AQ8IWF6 608 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms